RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 MED13Q9UHV7 2174 aa16.32■□□□□ 0.2
HOXA9-201ENST00000343483 CHD8Q9HCK8 2581 aa16.32■□□□□ 0.2
HOXA9-201ENST00000343483 IGHV3-9P01782 118 aa16.31■□□□□ 0.2
HOXA9-201ENST00000343483 IL5P05113 134 aa16.31■□□□□ 0.2
HOXA9-201ENST00000343483 FCER2P06734 321 aa16.31■□□□□ 0.2
HOXA9-201ENST00000343483 AKAIN1P0CW23 69 aa16.31■□□□□ 0.2
HOXA9-201ENST00000343483 LIPCP11150 499 aa16.31■□□□□ 0.2
HOXA9-201ENST00000343483 RBMS2Q15434 407 aaKnown RBP16.31■□□□□ 0.2
HOXA9-201ENST00000343483 SLC22A24Q8N4F4 322 aa16.31■□□□□ 0.2
HOXA9-201ENST00000343483 OR4D10Q8NGI6 311 aa16.31■□□□□ 0.2
HOXA9-201ENST00000343483 GINS4Q9BRT9 223 aa16.31■□□□□ 0.2
HOXA9-201ENST00000343483 KLK13Q9UKR3 277 aa16.31■□□□□ 0.2
HOXA9-201ENST00000343483 NOSIPQ9Y314 301 aaKnown RBP16.31■□□□□ 0.2
HOXA9-201ENST00000343483 ZFHX4Q86UP3 3567 aa16.31■□□□□ 0.2
HOXA9-201ENST00000343483 PYCARD-AS1I3L0S3 204 aa16.31■□□□□ 0.2
HOXA9-201ENST00000343483 M0R135 149 aa16.31■□□□□ 0.2
HOXA9-201ENST00000343483 SGCEO43556 437 aa16.31■□□□□ 0.2
HOXA9-201ENST00000343483 CREBL2O60519 120 aaPredicted RBP16.31■□□□□ 0.2
HOXA9-201ENST00000343483 SYNGR4O95473 234 aa16.31■□□□□ 0.2
HOXA9-201ENST00000343483 GABRA1P14867 456 aa16.31■□□□□ 0.2
HOXA9-201ENST00000343483 CCL1P22362 96 aa16.31■□□□□ 0.2
HOXA9-201ENST00000343483 MECP2P51608 486 aaKnown RBP16.31■□□□□ 0.2
HOXA9-201ENST00000343483 RSPO1Q2MKA7 263 aaPredicted RBP16.31■□□□□ 0.2
HOXA9-201ENST00000343483 ZNF529Q6P280 563 aa16.31■□□□□ 0.2
HOXA9-201ENST00000343483 OR2T35Q8NGX2 323 aa16.31■□□□□ 0.2
HOXA9-201ENST00000343483 GPX8Q8TED1 209 aa16.31■□□□□ 0.2
HOXA9-201ENST00000343483 SPTSSAQ969W0 71 aa16.31■□□□□ 0.2
HOXA9-201ENST00000343483 ZNF799Q96GE5 643 aa16.31■□□□□ 0.2
HOXA9-201ENST00000343483 FOXB1Q99853 325 aa16.31■□□□□ 0.2
HOXA9-201ENST00000343483 MGAT4CQ9UBM8 478 aa16.31■□□□□ 0.2
HOXA9-201ENST00000343483 WASF3Q9UPY6 502 aa16.31■□□□□ 0.2
HOXA9-201ENST00000343483 RHBDD3Q9Y3P4 386 aa16.31■□□□□ 0.2
HOXA9-201ENST00000343483 MRPL33O75394 65 aaKnown RBP16.3■□□□□ 0.2
HOXA9-201ENST00000343483 ALX3O95076 343 aa16.3■□□□□ 0.2
HOXA9-201ENST00000343483 ERCC1P07992 297 aaPredicted RBP16.3■□□□□ 0.2
HOXA9-201ENST00000343483 CST2P09228 141 aa16.3■□□□□ 0.2
HOXA9-201ENST00000343483 CPN1P15169 458 aa16.3■□□□□ 0.2
HOXA9-201ENST00000343483 SSBP1Q04837 148 aaKnown RBP16.3■□□□□ 0.2
HOXA9-201ENST00000343483 RIPPLY2Q5TAB7 128 aa16.3■□□□□ 0.2
HOXA9-201ENST00000343483 ZNF626Q68DY1 528 aa16.3■□□□□ 0.2
HOXA9-201ENST00000343483 TMPRSS7Q7RTY8 843 aa16.3■□□□□ 0.2
HOXA9-201ENST00000343483 OR8H1Q8NGG4 311 aa16.3■□□□□ 0.2
HOXA9-201ENST00000343483 OR8S1Q8NH09 359 aa16.3■□□□□ 0.2
HOXA9-201ENST00000343483 SPACA5Q96QH8 159 aa16.3■□□□□ 0.2
HOXA9-201ENST00000343483 SCNM1Q9BWG6 230 aa16.3■□□□□ 0.2
HOXA9-201ENST00000343483 CHIAQ9BZP6 476 aa16.3■□□□□ 0.2
HOXA9-201ENST00000343483 GPR35Q9HC97 309 aa16.3■□□□□ 0.2
HOXA9-201ENST00000343483 MCTS1Q9ULC4 181 aaKnown RBP16.3■□□□□ 0.2
HOXA9-201ENST00000343483 CFAP47Q6ZTR5 3102 aa16.3■□□□□ 0.2
HOXA9-201ENST00000343483 SNRPGP15A8MWD9 76 aa16.3■□□□□ 0.2
HOXA9-201ENST00000343483 LDLRAD4O15165 306 aa16.3■□□□□ 0.2
HOXA9-201ENST00000343483 PATE4P0C8F1 98 aa16.3■□□□□ 0.2
HOXA9-201ENST00000343483 ZNF93P35789 620 aaPredicted RBP16.3■□□□□ 0.2
HOXA9-201ENST00000343483 ACTBP60709 375 aa16.3■□□□□ 0.2
HOXA9-201ENST00000343483 ACTG1P63261 375 aa16.3■□□□□ 0.2
HOXA9-201ENST00000343483 RAB35Q15286 201 aa16.3■□□□□ 0.2
HOXA9-201ENST00000343483 C3AR1Q16581 482 aa16.3■□□□□ 0.2
HOXA9-201ENST00000343483 ZNF766Q5HY98 468 aa16.3■□□□□ 0.2
HOXA9-201ENST00000343483 ZNF774Q6NX45 483 aa16.3■□□□□ 0.2
HOXA9-201ENST00000343483 PGAP1Q75T13 922 aa16.3■□□□□ 0.2
HOXA9-201ENST00000343483 ZFP62Q8NB50 900 aaPredicted RBP16.3■□□□□ 0.2
HOXA9-201ENST00000343483 FNDC9Q8TBE3 224 aa16.3■□□□□ 0.2
HOXA9-201ENST00000343483 DVL3Q92997 716 aaPredicted RBP16.3■□□□□ 0.2
HOXA9-201ENST00000343483 TMEM45BQ96B21 275 aa16.3■□□□□ 0.2
HOXA9-201ENST00000343483 LYZL4Q96KX0 146 aa16.3■□□□□ 0.2
HOXA9-201ENST00000343483 UQCC2Q9BRT2 126 aa16.3■□□□□ 0.2
HOXA9-201ENST00000343483 PRRG4Q9BZD6 226 aa16.3■□□□□ 0.2
HOXA9-201ENST00000343483 ZNF552Q9H707 407 aaPredicted RBP16.3■□□□□ 0.2
HOXA9-201ENST00000343483 IGKV3D-15A0A087WSY6 115 aa16.29■□□□□ 0.2
HOXA9-201ENST00000343483 SULT1C2O00338 296 aa16.29■□□□□ 0.2
HOXA9-201ENST00000343483 CD3DP04234 171 aa16.29■□□□□ 0.2
HOXA9-201ENST00000343483 LPLP06858 475 aa16.29■□□□□ 0.2
HOXA9-201ENST00000343483 OTX1P32242 354 aaPredicted RBP16.29■□□□□ 0.2
HOXA9-201ENST00000343483 PMPCAQ10713 525 aa16.29■□□□□ 0.2
HOXA9-201ENST00000343483 SLC10A1Q14973 349 aa16.29■□□□□ 0.2
HOXA9-201ENST00000343483 SPICQ8N5J4 248 aa16.29■□□□□ 0.2
HOXA9-201ENST00000343483 OR51S1Q8NGJ8 323 aa16.29■□□□□ 0.2
HOXA9-201ENST00000343483 SEH1LQ96EE3 360 aa16.29■□□□□ 0.2
HOXA9-201ENST00000343483 EIF3KQ9UBQ5 218 aaKnown RBP16.29■□□□□ 0.2
HOXA9-201ENST00000343483 LIPGQ9Y5X9 500 aa16.29■□□□□ 0.2
HOXA9-201ENST00000343483 ERVH48-1M5A8F1 160 aa16.28■□□□□ 0.2
HOXA9-201ENST00000343483 TOXO94900 526 aa16.28■□□□□ 0.2
HOXA9-201ENST00000343483 APOC1P02654 83 aa16.28■□□□□ 0.2
HOXA9-201ENST00000343483 RLN1P04808 185 aa16.28■□□□□ 0.2
HOXA9-201ENST00000343483 TPOP07202 933 aa16.28■□□□□ 0.2
HOXA9-201ENST00000343483 VSIG10L2P0DP72 767 aa16.28■□□□□ 0.2
HOXA9-201ENST00000343483 ZNF32P17041 273 aa16.28■□□□□ 0.2
HOXA9-201ENST00000343483 CCL11P51671 97 aa16.28■□□□□ 0.2
HOXA9-201ENST00000343483 CAPZA1P52907 286 aa16.28■□□□□ 0.2
HOXA9-201ENST00000343483 PER3P56645 1201 aa16.28■□□□□ 0.2
HOXA9-201ENST00000343483 SCRN3Q0VDG4 424 aa16.28■□□□□ 0.2
HOXA9-201ENST00000343483 HYAL4Q2M3T9 481 aa16.28■□□□□ 0.2
HOXA9-201ENST00000343483 TSPO2Q5TGU0 170 aa16.28■□□□□ 0.2
HOXA9-201ENST00000343483 STEAP1BQ6NZ63 245 aa16.28■□□□□ 0.2
HOXA9-201ENST00000343483 TUSC5Q8IXB3 177 aa16.28■□□□□ 0.2
HOXA9-201ENST00000343483 OR14K1Q8NGZ2 314 aa16.28■□□□□ 0.2
HOXA9-201ENST00000343483 HAS2Q92819 552 aa16.28■□□□□ 0.2
HOXA9-201ENST00000343483 FAM46BQ96A09 425 aa16.28■□□□□ 0.2
HOXA9-201ENST00000343483 DEFB127Q9H1M4 99 aa16.28■□□□□ 0.2
HOXA9-201ENST00000343483 SLCO5A1Q9H2Y9 848 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms