RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 RPA2P15927 270 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 KLF9Q13886 244 aaPredicted RBP6.43□□□□□ -1.38
VCAN-202ENST00000342785 HNF4GQ14541 408 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 NOXO1Q8NFA2 376 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 IFI44Q8TCB0 444 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 OIT3Q8WWZ8 545 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 GNRHR2Q96P88 292 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 SPACA1Q9HBV2 294 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 SERPINE3A8MV23 424 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 BCL2L11O43521 198 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 CBR3O75828 277 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 IGHV4-34P06331 123 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 CPN1P15169 458 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 UBE2KP61086 200 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 ADGRG3Q86Y34 549 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 ZNF285Q96NJ3 590 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 LHX6Q9UPM6 363 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 FOXK1P85037 733 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 PDZK1IP1Q13113 114 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 CEACAM16Q2WEN9 425 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 AVPI1Q5T686 147 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 ADAM5Q6NVV9 412 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 Q6ZRG5 221 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 LRRTM1Q86UE6 522 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 SLC30A7Q8NEW0 376 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 OR56B2PQ8NGI1 322 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 AKR7LQ8NHP1 331 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 ANGPTL6Q8NI99 470 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 NKX6-2Q9C056 277 aaPredicted RBP6.43□□□□□ -1.38
VCAN-202ENST00000342785 ATPIF1Q9UII2 106 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 TP53TG5Q9Y2B4 290 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 PCDHGA9Q9Y5G4 932 aaKnown RBP6.43□□□□□ -1.38
VCAN-202ENST00000342785 DCTN6O00399 190 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 TAAR5O14804 337 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 CCL7P80098 99 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 RHBDD2Q6NTF9 364 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 GUSBP11Q6P575 273 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 TRILQ7L0X0 811 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 FBXL14Q8N1E6 418 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 THOC3Q96J01 351 aaKnown RBP6.43□□□□□ -1.38
VCAN-202ENST00000342785 SDHCQ99643 169 aaPredicted RBP6.43□□□□□ -1.38
VCAN-202ENST00000342785 UQCC2Q9BRT2 126 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 OPN4Q9UHM6 478 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 CACNA1HO95180 2353 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 CEBPZOSA8MTT3 80 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 XRCC2O43543 280 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 MRPS34P82930 218 aaKnown RBP6.43□□□□□ -1.38
VCAN-202ENST00000342785 SHEQ5VZ18 495 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.43□□□□□ -1.38
VCAN-202ENST00000342785 BPHLQ86WA6 291 aaPredicted RBP6.43□□□□□ -1.38
VCAN-202ENST00000342785 CARFQ8N187 725 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 ARHGAP5-AS1Q96IT6 56 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 SMCO4Q9NRQ5 59 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 ST3GAL6Q9Y274 331 aa6.43□□□□□ -1.38
VCAN-202ENST00000342785 MYOFQ9NZM1 2061 aa6.42□□□□□ -1.38
VCAN-202ENST00000342785 SHISA3A0PJX4 238 aa6.42□□□□□ -1.38
VCAN-202ENST00000342785 NXPH2O95156 264 aa6.42□□□□□ -1.38
VCAN-202ENST00000342785 TBX6O95947 436 aaPredicted RBP6.42□□□□□ -1.38
VCAN-202ENST00000342785 CLDN15P56746 228 aa6.42□□□□□ -1.38
VCAN-202ENST00000342785 IFITM2Q01629 132 aa6.42□□□□□ -1.38
VCAN-202ENST00000342785 CATR1Q13166 79 aa6.42□□□□□ -1.38
VCAN-202ENST00000342785 SFRP5Q5T4F7 317 aa6.42□□□□□ -1.38
VCAN-202ENST00000342785 C19orf48Q6RUI8 117 aa6.42□□□□□ -1.38
VCAN-202ENST00000342785 DPPA2Q7Z7J5 298 aa6.42□□□□□ -1.38
VCAN-202ENST00000342785 GVQW1Q8N7I0 195 aa6.42□□□□□ -1.38
VCAN-202ENST00000342785 CNTD2Q9H8S5 307 aa6.42□□□□□ -1.38
VCAN-202ENST00000342785 A0A087WZY1 265 aa6.42□□□□□ -1.38
VCAN-202ENST00000342785 AQP8O94778 261 aa6.42□□□□□ -1.38
VCAN-202ENST00000342785 HIST1H1DP16402 221 aaKnown RBP6.42□□□□□ -1.38
VCAN-202ENST00000342785 CLN3Q13286 438 aa6.42□□□□□ -1.38
VCAN-202ENST00000342785 KISS1Q15726 138 aa6.42□□□□□ -1.38
VCAN-202ENST00000342785 PNLIPRP3Q17RR3 467 aa6.42□□□□□ -1.38
VCAN-202ENST00000342785 HLA-BQ31612 363 aa6.42□□□□□ -1.38
VCAN-202ENST00000342785 TFAP2EQ6VUC0 442 aa6.42□□□□□ -1.38
VCAN-202ENST00000342785 PRSS42Q7Z5A4 293 aa6.42□□□□□ -1.38
VCAN-202ENST00000342785 MRGPREQ86SM8 312 aa6.42□□□□□ -1.38
VCAN-202ENST00000342785 RBMXL1Q96E39 390 aaKnown RBP6.42□□□□□ -1.38
VCAN-202ENST00000342785 NTMQ9P121 344 aa6.42□□□□□ -1.38
VCAN-202ENST00000342785 GNG12Q9UBI6 72 aa6.42□□□□□ -1.38
VCAN-202ENST00000342785 A0A096LPE4 126 aa6.42□□□□□ -1.38
VCAN-202ENST00000342785 A0A1W2PPZ6 126 aa6.42□□□□□ -1.38
VCAN-202ENST00000342785 TCRBV16S1A1N1A0A5B0 115 aa6.42□□□□□ -1.38
VCAN-202ENST00000342785 TMIGD3P0DMS9 266 aaPredicted RBP6.42□□□□□ -1.38
VCAN-202ENST00000342785 FCARP24071 287 aa6.42□□□□□ -1.38
VCAN-202ENST00000342785 RFC3P40938 356 aa6.42□□□□□ -1.38
VCAN-202ENST00000342785 ERVK-16P61578 105 aa6.42□□□□□ -1.38
VCAN-202ENST00000342785 ZDHHC22Q8N966 263 aa6.42□□□□□ -1.38
VCAN-202ENST00000342785 APOBEC4Q8WW27 367 aaKnown RBP6.42□□□□□ -1.38
VCAN-202ENST00000342785 ROBO4Q8WZ75 1007 aa6.42□□□□□ -1.38
VCAN-202ENST00000342785 FBXW5Q969U6 566 aa6.42□□□□□ -1.38
VCAN-202ENST00000342785 INTS12Q96CB8 462 aaKnown RBP6.42□□□□□ -1.38
VCAN-202ENST00000342785 KPTNQ9Y664 436 aa6.42□□□□□ -1.38
VCAN-202ENST00000342785 A0A1W2PQD3 144 aa6.42□□□□□ -1.38
VCAN-202ENST00000342785 KLRC4-KLRK1H3BQV0 150 aa6.42□□□□□ -1.38
VCAN-202ENST00000342785 LRP3O75074 770 aa6.42□□□□□ -1.38
VCAN-202ENST00000342785 HLA-DQB1P01920 261 aa6.42□□□□□ -1.38
VCAN-202ENST00000342785 GABRA1P14867 456 aa6.42□□□□□ -1.38
VCAN-202ENST00000342785 MPPED2Q15777 294 aa6.42□□□□□ -1.38
VCAN-202ENST00000342785 LGALSLQ3ZCW2 172 aaPredicted RBP6.42□□□□□ -1.38
VCAN-202ENST00000342785 ATPAF1Q5TC12 328 aaPredicted RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms