RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 ARG1P05089 322 aa13.41□□□□□ -0.26
BRAT1-201ENST00000340611 GUSBP08236 651 aa13.41□□□□□ -0.26
BRAT1-201ENST00000340611 RCC1P18754 421 aaPredicted RBP13.41□□□□□ -0.26
BRAT1-201ENST00000340611 CDK2P24941 298 aa13.41□□□□□ -0.26
BRAT1-201ENST00000340611 RAB5CP51148 216 aa13.41□□□□□ -0.26
BRAT1-201ENST00000340611 NHLH1Q02575 133 aa13.41□□□□□ -0.26
BRAT1-201ENST00000340611 EGR4Q05215 589 aa13.41□□□□□ -0.26
BRAT1-201ENST00000340611 ELOA3BQ3SY89 546 aa13.41□□□□□ -0.26
BRAT1-201ENST00000340611 ELFN2Q5R3F8 820 aa13.41□□□□□ -0.26
BRAT1-201ENST00000340611 CDK20Q8IZL9 346 aa13.41□□□□□ -0.26
BRAT1-201ENST00000340611 BEST3Q8N1M1 668 aa13.41□□□□□ -0.26
BRAT1-201ENST00000340611 TMEM156Q8N614 296 aa13.41□□□□□ -0.26
BRAT1-201ENST00000340611 ELOA3Q8NG57 546 aa13.41□□□□□ -0.26
BRAT1-201ENST00000340611 KTI12Q96EK9 354 aaPredicted RBP13.41□□□□□ -0.26
BRAT1-201ENST00000340611 JSRP1Q96MG2 331 aaPredicted RBP13.41□□□□□ -0.26
BRAT1-201ENST00000340611 SEC11CQ9BY50 192 aa13.41□□□□□ -0.26
BRAT1-201ENST00000340611 OPN3Q9H1Y3 402 aaPredicted RBP13.41□□□□□ -0.26
BRAT1-201ENST00000340611 PLEKHA1Q9HB21 404 aa13.41□□□□□ -0.26
BRAT1-201ENST00000340611 OGG1O15527 345 aa13.4□□□□□ -0.26
BRAT1-201ENST00000340611 IL11P20809 199 aa13.4□□□□□ -0.26
BRAT1-201ENST00000340611 DPP4P27487 766 aa13.4□□□□□ -0.26
BRAT1-201ENST00000340611 PTGDSP41222 190 aa13.4□□□□□ -0.26
BRAT1-201ENST00000340611 EXT1Q16394 746 aa13.4□□□□□ -0.26
BRAT1-201ENST00000340611 HYAL4Q2M3T9 481 aa13.4□□□□□ -0.26
BRAT1-201ENST00000340611 C15orf54Q8N8G6 183 aa13.4□□□□□ -0.26
BRAT1-201ENST00000340611 ZNRF4Q8WWF5 429 aa13.4□□□□□ -0.26
BRAT1-201ENST00000340611 RGP1Q92546 391 aaPredicted RBP13.4□□□□□ -0.26
BRAT1-201ENST00000340611 THOC3Q96J01 351 aaKnown RBP13.4□□□□□ -0.26
BRAT1-201ENST00000340611 MMP25Q9NPA2 562 aa13.4□□□□□ -0.26
BRAT1-201ENST00000340611 FOXJ3Q9UPW0 622 aa13.4□□□□□ -0.26
BRAT1-201ENST00000340611 A0A087WUJ7 227 aa13.4□□□□□ -0.26
BRAT1-201ENST00000340611 A0A0G2JMM0 328 aa13.4□□□□□ -0.26
BRAT1-201ENST00000340611 A0A1W2PPB8 328 aa13.4□□□□□ -0.26
BRAT1-201ENST00000340611 A0A1W2PRS3 328 aa13.4□□□□□ -0.26
BRAT1-201ENST00000340611 IFITM10A6NMD0 228 aa13.4□□□□□ -0.26
BRAT1-201ENST00000340611 KIR3DP1A8MWS1 328 aa13.4□□□□□ -0.26
BRAT1-201ENST00000340611 SFTA3P0C7M3 94 aa13.4□□□□□ -0.26
BRAT1-201ENST00000340611 WT1P19544 449 aaPredicted RBP13.4□□□□□ -0.26
BRAT1-201ENST00000340611 ACKR3P25106 362 aa13.4□□□□□ -0.26
BRAT1-201ENST00000340611 CBFBQ13951 182 aa13.4□□□□□ -0.26
BRAT1-201ENST00000340611 WBP2NLQ6ICG8 309 aa13.4□□□□□ -0.26
BRAT1-201ENST00000340611 FBXL3Q9UKT7 428 aa13.4□□□□□ -0.26
BRAT1-201ENST00000340611 ZDHHC8Q9ULC8 765 aa13.4□□□□□ -0.26
BRAT1-201ENST00000340611 LOC100509620A0A075B734 347 aa13.4□□□□□ -0.27
BRAT1-201ENST00000340611 NAP1L6A6NFF2 107 aa13.4□□□□□ -0.27
BRAT1-201ENST00000340611 CCSO14618 274 aa13.4□□□□□ -0.27
BRAT1-201ENST00000340611 NDUFB6O95139 128 aa13.4□□□□□ -0.27
BRAT1-201ENST00000340611 IFNA2P01563 188 aa13.4□□□□□ -0.27
BRAT1-201ENST00000340611 ACTC1P68032 377 aa13.4□□□□□ -0.27
BRAT1-201ENST00000340611 ACTA1P68133 377 aa13.4□□□□□ -0.27
BRAT1-201ENST00000340611 PPA1Q15181 289 aa13.4□□□□□ -0.27
BRAT1-201ENST00000340611 LINC00114Q6XXX2 140 aa13.4□□□□□ -0.27
BRAT1-201ENST00000340611 ATG4DQ86TL0 474 aaPredicted RBP13.4□□□□□ -0.27
BRAT1-201ENST00000340611 FOXRED2Q8IWF2 684 aa13.4□□□□□ -0.27
BRAT1-201ENST00000340611 OR1J4Q8NGS1 313 aa13.4□□□□□ -0.27
BRAT1-201ENST00000340611 OR2G2Q8NGZ5 317 aa13.4□□□□□ -0.27
BRAT1-201ENST00000340611 S100A16Q96FQ6 103 aaKnown RBP13.4□□□□□ -0.27
BRAT1-201ENST00000340611 ZNF426Q9BUY5 554 aa13.4□□□□□ -0.27
BRAT1-201ENST00000340611 ASCL3Q9NQ33 180 aa13.4□□□□□ -0.27
BRAT1-201ENST00000340611 OR5V1Q9UGF6 321 aa13.4□□□□□ -0.27
BRAT1-201ENST00000340611 CHCHD2Q9Y6H1 151 aaPredicted RBP13.4□□□□□ -0.27
BRAT1-201ENST00000340611 NCKAP5O14513 1909 aa13.39□□□□□ -0.27
BRAT1-201ENST00000340611 MEIS3P1A6NDR6 274 aa13.39□□□□□ -0.27
BRAT1-201ENST00000340611 RFPL4AA6NLU0 287 aa13.39□□□□□ -0.27
BRAT1-201ENST00000340611 RFPL4AL1F8VTS6 287 aa13.39□□□□□ -0.27
BRAT1-201ENST00000340611 RAB40ALP0C0E4 278 aa13.39□□□□□ -0.27
BRAT1-201ENST00000340611 FBXO45P0C2W1 286 aa13.39□□□□□ -0.27
BRAT1-201ENST00000340611 LIFP15018 202 aa13.39□□□□□ -0.27
BRAT1-201ENST00000340611 ZNF25P17030 456 aaPredicted RBP13.39□□□□□ -0.27
BRAT1-201ENST00000340611 LSM6P62312 80 aaKnown RBP13.39□□□□□ -0.27
BRAT1-201ENST00000340611 OR10K2Q6IF99 312 aa13.39□□□□□ -0.27
BRAT1-201ENST00000340611 TMPRSS12Q86WS5 348 aa13.39□□□□□ -0.27
BRAT1-201ENST00000340611 M1APQ8TC57 530 aa13.39□□□□□ -0.27
BRAT1-201ENST00000340611 GPR119Q8TDV5 335 aa13.39□□□□□ -0.27
BRAT1-201ENST00000340611 TMED6Q8WW62 240 aa13.39□□□□□ -0.27
BRAT1-201ENST00000340611 IP6K3Q96PC2 410 aa13.39□□□□□ -0.27
BRAT1-201ENST00000340611 NRIP2Q9BQI9 281 aa13.39□□□□□ -0.27
BRAT1-201ENST00000340611 ACKR4Q9NPB9 350 aa13.39□□□□□ -0.27
BRAT1-201ENST00000340611 ANKRD11Q6UB99 2663 aaPredicted RBP13.39□□□□□ -0.27
BRAT1-201ENST00000340611 FAM171A2A8MVW0 826 aa13.39□□□□□ -0.27
BRAT1-201ENST00000340611 TSTD3H0UI37 97 aa13.39□□□□□ -0.27
BRAT1-201ENST00000340611 DLL1O00548 723 aa13.39□□□□□ -0.27
BRAT1-201ENST00000340611 SNAPC5O75971 98 aa13.39□□□□□ -0.27
BRAT1-201ENST00000340611 CEACAM1P13688 526 aa13.39□□□□□ -0.27
BRAT1-201ENST00000340611 RAB5AP20339 215 aa13.39□□□□□ -0.27
BRAT1-201ENST00000340611 SOX2P48431 317 aa13.39□□□□□ -0.27
BRAT1-201ENST00000340611 LTBQ06643 244 aa13.39□□□□□ -0.27
BRAT1-201ENST00000340611 SLC35F2Q8IXU6 374 aa13.39□□□□□ -0.27
BRAT1-201ENST00000340611 GNRHR2Q96P88 292 aa13.39□□□□□ -0.27
BRAT1-201ENST00000340611 ADAM18Q9Y3Q7 739 aa13.39□□□□□ -0.27
BRAT1-201ENST00000340611 PIEZO2Q9H5I5 2752 aa13.38□□□□□ -0.27
BRAT1-201ENST00000340611 SNRPGP15A8MWD9 76 aa13.38□□□□□ -0.27
BRAT1-201ENST00000340611 BLOC1S5-TXNDC5H3BN57 136 aa13.38□□□□□ -0.27
BRAT1-201ENST00000340611 M0R036 132 aa13.38□□□□□ -0.27
BRAT1-201ENST00000340611 NKX2-8O15522 239 aa13.38□□□□□ -0.27
BRAT1-201ENST00000340611 RBBP9O75884 186 aa13.38□□□□□ -0.27
BRAT1-201ENST00000340611 MT-ND4LP03901 98 aa13.38□□□□□ -0.27
BRAT1-201ENST00000340611 HIST1H1CP16403 213 aaKnown RBP13.38□□□□□ -0.27
BRAT1-201ENST00000340611 NME2P22392 152 aa13.38□□□□□ -0.27
BRAT1-201ENST00000340611 FHL1Q13642 323 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms