RNA–Protein interactions for RNA: ENST00000339997.8

RTN3-202, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-202ENST00000339997 MANEAQ5SRI9 462 aa7.85□□□□□ -1.15
RTN3-202ENST00000339997 OR2A2Q6IF42 318 aa7.85□□□□□ -1.15
RTN3-202ENST00000339997 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.85□□□□□ -1.15
RTN3-202ENST00000339997 KTI12Q96EK9 354 aaPredicted RBP7.85□□□□□ -1.15
RTN3-202ENST00000339997 IFT22Q9H7X7 185 aa7.85□□□□□ -1.15
RTN3-202ENST00000339997 LIN7CQ9NUP9 197 aaKnown RBP7.85□□□□□ -1.15
RTN3-202ENST00000339997 AMDHD2Q9Y303 409 aa7.85□□□□□ -1.15
RTN3-202ENST00000339997 NRXN2Q9P2S2 1712 aa7.85□□□□□ -1.15
RTN3-202ENST00000339997 ARFGEF1Q9Y6D6 1849 aa7.85□□□□□ -1.15
RTN3-202ENST00000339997 LEUTXA8MZ59 168 aa7.85□□□□□ -1.15
RTN3-202ENST00000339997 GPR37O15354 613 aa7.85□□□□□ -1.15
RTN3-202ENST00000339997 PLA2G10O15496 165 aa7.85□□□□□ -1.15
RTN3-202ENST00000339997 CHRM2P08172 466 aa7.85□□□□□ -1.15
RTN3-202ENST00000339997 DOC2BQ14184 412 aa7.85□□□□□ -1.15
RTN3-202ENST00000339997 PARM1Q6UWI2 310 aa7.85□□□□□ -1.15
RTN3-202ENST00000339997 ZNF793Q6ZN11 406 aa7.85□□□□□ -1.15
RTN3-202ENST00000339997 SLC25A26Q70HW3 274 aa7.85□□□□□ -1.15
RTN3-202ENST00000339997 LINC01465Q8N7H1 131 aa7.85□□□□□ -1.15
RTN3-202ENST00000339997 PINX1Q96BK5 328 aaKnown RBP7.85□□□□□ -1.15
RTN3-202ENST00000339997 EPHX3Q9H6B9 360 aa7.85□□□□□ -1.15
RTN3-202ENST00000339997 KIR3DX1Q9H7L2 352 aa7.85□□□□□ -1.15
RTN3-202ENST00000339997 CHRNA9Q9UGM1 479 aa7.85□□□□□ -1.15
RTN3-202ENST00000339997 LAMTOR5O43504 91 aa7.85□□□□□ -1.15
RTN3-202ENST00000339997 MPZL1O95297 269 aa7.85□□□□□ -1.15
RTN3-202ENST00000339997 CER1O95813 267 aa7.85□□□□□ -1.15
RTN3-202ENST00000339997 PRR35P0CG20 571 aa7.85□□□□□ -1.15
RTN3-202ENST00000339997 KCNJ3P48549 501 aa7.85□□□□□ -1.15
RTN3-202ENST00000339997 PPP2CBP62714 309 aa7.85□□□□□ -1.15
RTN3-202ENST00000339997 HMGN3Q15651 99 aa7.85□□□□□ -1.15
RTN3-202ENST00000339997 GSG1Q2KHT4 349 aa7.85□□□□□ -1.15
RTN3-202ENST00000339997 SPATA46Q5T0L3 261 aa7.85□□□□□ -1.15
RTN3-202ENST00000339997 GLDNQ6ZMI3 551 aaPredicted RBP7.85□□□□□ -1.15
RTN3-202ENST00000339997 LIMS2Q7Z4I7 341 aa7.85□□□□□ -1.15
RTN3-202ENST00000339997 DND1Q8IYX4 353 aaKnown RBP7.85□□□□□ -1.15
RTN3-202ENST00000339997 LSMEM1Q8N8F7 131 aa7.85□□□□□ -1.15
RTN3-202ENST00000339997 OR10AC1Q8NH08 325 aa7.85□□□□□ -1.15
RTN3-202ENST00000339997 ANGPTL6Q8NI99 470 aa7.85□□□□□ -1.15
RTN3-202ENST00000339997 SCMH1Q96GD3 660 aa7.85□□□□□ -1.15
RTN3-202ENST00000339997 EVA1AQ9H8M9 152 aa7.85□□□□□ -1.15
RTN3-202ENST00000339997 MDKP21741 143 aaPredicted RBP7.85□□□□□ -1.15
RTN3-202ENST00000339997 LGALS4P56470 323 aa7.85□□□□□ -1.15
RTN3-202ENST00000339997 H3F3AP84243 136 aa7.85□□□□□ -1.15
RTN3-202ENST00000339997 DMWDQ09019 674 aa7.85□□□□□ -1.15
RTN3-202ENST00000339997 RAB32Q13637 225 aa7.85□□□□□ -1.15
RTN3-202ENST00000339997 TUSC1Q2TAM9 212 aa7.85□□□□□ -1.15
RTN3-202ENST00000339997 TSPO2Q5TGU0 170 aa7.85□□□□□ -1.15
RTN3-202ENST00000339997 C11orf87Q6NUJ2 197 aa7.85□□□□□ -1.15
RTN3-202ENST00000339997 ANKRD16Q6P6B7 361 aa7.85□□□□□ -1.15
RTN3-202ENST00000339997 PLXDC2Q6UX71 529 aa7.85□□□□□ -1.15
RTN3-202ENST00000339997 ZNF66Q6ZN08 573 aa7.85□□□□□ -1.15
RTN3-202ENST00000339997 EMG1Q92979 244 aaKnown RBP7.85□□□□□ -1.15
RTN3-202ENST00000339997 ADIPOR1Q96A54 375 aa7.85□□□□□ -1.15
RTN3-202ENST00000339997 ZC3HAV1LQ96H79 300 aaKnown RBP7.85□□□□□ -1.15
RTN3-202ENST00000339997 KIRREL1Q96J84 757 aa7.85□□□□□ -1.15
RTN3-202ENST00000339997 DOK1Q99704 481 aa7.85□□□□□ -1.15
RTN3-202ENST00000339997 ARL2-SNX15V9GYD0 113 aa7.85□□□□□ -1.15
RTN3-202ENST00000339997 ATAD5Q96QE3 1844 aa7.85□□□□□ -1.15
RTN3-202ENST00000339997 MN1Q10571 1320 aaPredicted RBP7.84□□□□□ -1.15
RTN3-202ENST00000339997 TIMM8AO60220 97 aaPredicted RBP7.84□□□□□ -1.15
RTN3-202ENST00000339997 RAE1P78406 368 aaKnown RBP7.84□□□□□ -1.15
RTN3-202ENST00000339997 CATR1Q13166 79 aa7.84□□□□□ -1.15
RTN3-202ENST00000339997 ZNF561Q8N587 486 aa7.84□□□□□ -1.15
RTN3-202ENST00000339997 C11orf42Q8N5U0 333 aa7.84□□□□□ -1.15
RTN3-202ENST00000339997 RBMXL3Q8N7X1 1067 aaKnown RBP7.84□□□□□ -1.15
RTN3-202ENST00000339997 NKAIN3Q8N8D7 197 aa7.84□□□□□ -1.15
RTN3-202ENST00000339997 SLC38A9Q8NBW4 561 aa7.84□□□□□ -1.15
RTN3-202ENST00000339997 GJC3Q8NFK1 279 aa7.84□□□□□ -1.15
RTN3-202ENST00000339997 SLC46A1Q96NT5 459 aa7.84□□□□□ -1.15
RTN3-202ENST00000339997 SPOCK3Q9BQ16 436 aa7.84□□□□□ -1.15
RTN3-202ENST00000339997 GDE1Q9NZC3 331 aa7.84□□□□□ -1.15
RTN3-202ENST00000339997 MYOTQ9UBF9 498 aa7.84□□□□□ -1.15
RTN3-202ENST00000339997 PRELID3BQ9Y3B1 194 aa7.84□□□□□ -1.15
RTN3-202ENST00000339997 LTBP3Q9NS15 1303 aa7.84□□□□□ -1.15
RTN3-202ENST00000339997 YKT6O15498 198 aa7.84□□□□□ -1.15
RTN3-202ENST00000339997 ABLIM3O94929 683 aa7.84□□□□□ -1.15
RTN3-202ENST00000339997 ANKRD34CP0C6C1 535 aa7.84□□□□□ -1.15
RTN3-202ENST00000339997 FAM157BP0CG42 384 aa7.84□□□□□ -1.15
RTN3-202ENST00000339997 SLC25A4P12235 298 aa7.84□□□□□ -1.15
RTN3-202ENST00000339997 F2RP25116 425 aa7.84□□□□□ -1.15
RTN3-202ENST00000339997 PAX6P26367 422 aa7.84□□□□□ -1.15
RTN3-202ENST00000339997 MMP15P51511 669 aa7.84□□□□□ -1.15
RTN3-202ENST00000339997 DUSP8Q13202 625 aa7.84□□□□□ -1.15
RTN3-202ENST00000339997 SLC17A1Q14916 467 aa7.84□□□□□ -1.15
RTN3-202ENST00000339997 ETFDHQ16134 617 aa7.84□□□□□ -1.15
RTN3-202ENST00000339997 ZNF787Q6DD87 383 aa7.84□□□□□ -1.15
RTN3-202ENST00000339997 LYG2Q86SG7 212 aa7.84□□□□□ -1.15
RTN3-202ENST00000339997 OR13D1Q8NGV5 346 aa7.84□□□□□ -1.15
RTN3-202ENST00000339997 OR6K3Q8NGY3 331 aa7.84□□□□□ -1.15
RTN3-202ENST00000339997 OR6S1Q8NH40 331 aa7.84□□□□□ -1.15
RTN3-202ENST00000339997 OR10J5Q8NHC4 309 aa7.84□□□□□ -1.15
RTN3-202ENST00000339997 FGF20Q9NP95 211 aaPredicted RBP7.84□□□□□ -1.15
RTN3-202ENST00000339997 SCN9AQ15858 1988 aa7.84□□□□□ -1.15
RTN3-202ENST00000339997 ZNF732B4DXR9 585 aa7.84□□□□□ -1.15
RTN3-202ENST00000339997 CHEK1O14757 476 aa7.84□□□□□ -1.15
RTN3-202ENST00000339997 YIF1AO95070 293 aa7.84□□□□□ -1.15
RTN3-202ENST00000339997 MBP02144 154 aa7.84□□□□□ -1.15
RTN3-202ENST00000339997 CD96P40200 585 aa7.84□□□□□ -1.15
RTN3-202ENST00000339997 VEGFBP49765 207 aa7.84□□□□□ -1.15
RTN3-202ENST00000339997 RBP2P50120 134 aa7.84□□□□□ -1.15
RTN3-202ENST00000339997 MNX1P50219 401 aaPredicted RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms