RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 IFT46Q9NQC8 304 aa14.39□□□□□ -0.11
LITAF-201ENST00000339430 KIF25Q9UIL4 384 aa14.39□□□□□ -0.11
LITAF-201ENST00000339430 A0A1W2PP11 408 aa14.38□□□□□ -0.11
LITAF-201ENST00000339430 C5orf63A6NC05 138 aa14.38□□□□□ -0.11
LITAF-201ENST00000339430 STMND1H3BQB6 276 aa14.38□□□□□ -0.11
LITAF-201ENST00000339430 MASP2O00187 686 aa14.38□□□□□ -0.11
LITAF-201ENST00000339430 SPDEFO95238 335 aa14.38□□□□□ -0.11
LITAF-201ENST00000339430 CD34P28906 385 aa14.38□□□□□ -0.11
LITAF-201ENST00000339430 CD96P40200 585 aa14.38□□□□□ -0.11
LITAF-201ENST00000339430 SGCAQ16586 387 aa14.38□□□□□ -0.11
LITAF-201ENST00000339430 GLIPR1L1Q6UWM5 242 aa14.38□□□□□ -0.11
LITAF-201ENST00000339430 PPP1R32Q7Z5V6 425 aa14.38□□□□□ -0.11
LITAF-201ENST00000339430 BEST3Q8N1M1 668 aa14.38□□□□□ -0.11
LITAF-201ENST00000339430 ZNF283Q8N7M2 679 aa14.38□□□□□ -0.11
LITAF-201ENST00000339430 TMEM104Q8NE00 496 aa14.38□□□□□ -0.11
LITAF-201ENST00000339430 RBPMSQ93062 196 aaKnown RBP14.38□□□□□ -0.11
LITAF-201ENST00000339430 SEC22AQ96IW7 307 aa14.38□□□□□ -0.11
LITAF-201ENST00000339430 UQCC2Q9BRT2 126 aa14.38□□□□□ -0.11
LITAF-201ENST00000339430 BANF2Q9H503 90 aa14.38□□□□□ -0.11
LITAF-201ENST00000339430 KCNK7Q9Y2U2 307 aa14.38□□□□□ -0.11
LITAF-201ENST00000339430 MPIG6BO95866 241 aa14.38□□□□□ -0.11
LITAF-201ENST00000339430 IGHEP01854 428 aa14.38□□□□□ -0.11
LITAF-201ENST00000339430 MEF2DQ14814 521 aa14.38□□□□□ -0.11
LITAF-201ENST00000339430 NAA40Q86UY6 237 aa14.38□□□□□ -0.11
LITAF-201ENST00000339430 FADS6Q8N9I5 356 aa14.38□□□□□ -0.11
LITAF-201ENST00000339430 ADPRHL1Q8NDY3 354 aa14.38□□□□□ -0.11
LITAF-201ENST00000339430 MARVELD3Q96A59 401 aa14.38□□□□□ -0.11
LITAF-201ENST00000339430 JSRP1Q96MG2 331 aaPredicted RBP14.38□□□□□ -0.11
LITAF-201ENST00000339430 GNRHR2Q96P88 292 aa14.38□□□□□ -0.11
LITAF-201ENST00000339430 ZNF160Q9HCG1 818 aa14.38□□□□□ -0.11
LITAF-201ENST00000339430 PNRC2Q9NPJ4 139 aaKnown RBP14.38□□□□□ -0.11
LITAF-201ENST00000339430 MYO7BQ6PIF6 2116 aa14.37□□□□□ -0.11
LITAF-201ENST00000339430 NSG1A0A0A6YYJ2 146 aa14.37□□□□□ -0.11
LITAF-201ENST00000339430 AQP7P3A6NL99 342 aa14.37□□□□□ -0.11
LITAF-201ENST00000339430 E9PLN8 166 aa14.37□□□□□ -0.11
LITAF-201ENST00000339430 PMP2P02689 132 aa14.37□□□□□ -0.11
LITAF-201ENST00000339430 HCKP08631 526 aa14.37□□□□□ -0.11
LITAF-201ENST00000339430 GK2Q14410 553 aaPredicted RBP14.37□□□□□ -0.11
LITAF-201ENST00000339430 SSPNQ14714 243 aa14.37□□□□□ -0.11
LITAF-201ENST00000339430 ZNF529Q6P280 563 aa14.37□□□□□ -0.11
LITAF-201ENST00000339430 OR5AS1Q8N127 324 aa14.37□□□□□ -0.11
LITAF-201ENST00000339430 OR10R2Q8NGX6 335 aa14.37□□□□□ -0.11
LITAF-201ENST00000339430 ZBTB8AQ96BR9 441 aa14.37□□□□□ -0.11
LITAF-201ENST00000339430 PRRT1Q99946 306 aa14.37□□□□□ -0.11
LITAF-201ENST00000339430 PDCD10Q9BUL8 212 aa14.37□□□□□ -0.11
LITAF-201ENST00000339430 CST11Q9H112 138 aa14.37□□□□□ -0.11
LITAF-201ENST00000339430 MRPS28Q9Y2Q9 187 aaKnown RBP14.37□□□□□ -0.11
LITAF-201ENST00000339430 A0A0A6YYD4 124 aa14.37□□□□□ -0.11
LITAF-201ENST00000339430 hCG_1807616A0A1W2PRN6 198 aa14.37□□□□□ -0.11
LITAF-201ENST00000339430 RFPL4AA6NLU0 287 aa14.37□□□□□ -0.11
LITAF-201ENST00000339430 RFPL4AL1F8VTS6 287 aa14.37□□□□□ -0.11
LITAF-201ENST00000339430 TP53I11O14683 189 aa14.37□□□□□ -0.11
LITAF-201ENST00000339430 SSX5O60225 188 aa14.37□□□□□ -0.11
LITAF-201ENST00000339430 NMBP08949 121 aa14.37□□□□□ -0.11
LITAF-201ENST00000339430 CAPZA1P52907 286 aa14.37□□□□□ -0.11
LITAF-201ENST00000339430 PPP1R1AQ13522 171 aa14.37□□□□□ -0.11
LITAF-201ENST00000339430 TMEM65Q6PI78 240 aa14.37□□□□□ -0.11
LITAF-201ENST00000339430 WBP1Q96G27 269 aa14.37□□□□□ -0.11
LITAF-201ENST00000339430 GPR87Q9BY21 358 aa14.37□□□□□ -0.11
LITAF-201ENST00000339430 SDHAF2Q9NX18 166 aa14.37□□□□□ -0.11
LITAF-201ENST00000339430 DLL3Q9NYJ7 618 aa14.37□□□□□ -0.11
LITAF-201ENST00000339430 TMEM14DPA8MWL7 114 aa14.36□□□□□ -0.11
LITAF-201ENST00000339430 C21orf140B9A014 251 aa14.36□□□□□ -0.11
LITAF-201ENST00000339430 SOCS1O15524 211 aa14.36□□□□□ -0.11
LITAF-201ENST00000339430 B3GALNT1O75752 331 aa14.36□□□□□ -0.11
LITAF-201ENST00000339430 CCL3P10147 92 aa14.36□□□□□ -0.11
LITAF-201ENST00000339430 ZNF17P17021 662 aa14.36□□□□□ -0.11
LITAF-201ENST00000339430 EXT1Q16394 746 aa14.36□□□□□ -0.11
LITAF-201ENST00000339430 PHYHD1Q5SRE7 291 aa14.36□□□□□ -0.11
LITAF-201ENST00000339430 RHOUQ7L0Q8 258 aa14.36□□□□□ -0.11
LITAF-201ENST00000339430 ZNF546Q86UE3 836 aa14.36□□□□□ -0.11
LITAF-201ENST00000339430 ADAD2Q8NCV1 583 aaKnown RBP14.36□□□□□ -0.11
LITAF-201ENST00000339430 OR5M8Q8NGP6 311 aa14.36□□□□□ -0.11
LITAF-201ENST00000339430 SCARB1Q8WTV0 552 aa14.36□□□□□ -0.11
LITAF-201ENST00000339430 NPRL2Q8WTW4 380 aa14.36□□□□□ -0.11
LITAF-201ENST00000339430 ST8SIA4Q92187 359 aa14.36□□□□□ -0.11
LITAF-201ENST00000339430 TMEM41AQ96HV5 264 aa14.36□□□□□ -0.11
LITAF-201ENST00000339430 DMRTA2Q96SC8 542 aa14.36□□□□□ -0.11
LITAF-201ENST00000339430 GPER1Q99527 375 aa14.36□□□□□ -0.11
LITAF-201ENST00000339430 ZNF416Q9BWM5 594 aa14.36□□□□□ -0.11
LITAF-201ENST00000339430 LPAR5Q9H1C0 372 aa14.36□□□□□ -0.11
LITAF-201ENST00000339430 MOB1AQ9H8S9 216 aa14.36□□□□□ -0.11
LITAF-201ENST00000339430 ZNF107Q9UII5 783 aaPredicted RBP14.36□□□□□ -0.11
LITAF-201ENST00000339430 HDGFL3Q9Y3E1 203 aa14.36□□□□□ -0.11
LITAF-201ENST00000339430 PTPRBP23467 1997 aa14.36□□□□□ -0.11
LITAF-201ENST00000339430 OR5H14A6NHG9 310 aa14.36□□□□□ -0.11
LITAF-201ENST00000339430 TUBAL3A6NHL2 446 aa14.36□□□□□ -0.11
LITAF-201ENST00000339430 OR2AT4A6NND4 320 aa14.36□□□□□ -0.11
LITAF-201ENST00000339430 FAM25EA8MYX2 175 aa14.36□□□□□ -0.11
LITAF-201ENST00000339430 TERTO14746 1132 aaKnown RBP14.36□□□□□ -0.11
LITAF-201ENST00000339430 WDPCPO95876 746 aa14.36□□□□□ -0.11
LITAF-201ENST00000339430 ERCC1P07992 297 aaPredicted RBP14.36□□□□□ -0.11
LITAF-201ENST00000339430 AKR1C4P17516 323 aa14.36□□□□□ -0.11
LITAF-201ENST00000339430 ATXN7L3Q14CW9 347 aaPredicted RBP14.36□□□□□ -0.11
LITAF-201ENST00000339430 HIST3H3Q16695 136 aa14.36□□□□□ -0.11
LITAF-201ENST00000339430 RSPO4Q2I0M5 234 aaPredicted RBP14.36□□□□□ -0.11
LITAF-201ENST00000339430 CLVS2Q5SYC1 327 aa14.36□□□□□ -0.11
LITAF-201ENST00000339430 RAET1LQ5VY80 246 aa14.36□□□□□ -0.11
LITAF-201ENST00000339430 TMPPEQ6ZT21 453 aa14.36□□□□□ -0.11
LITAF-201ENST00000339430 OR5D18Q8NGL1 313 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms