RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 OR5AP2Q8NGF4 316 aa12.37□□□□□ -0.43
RTN4-202ENST00000337526 ANGPTL6Q8NI99 470 aa12.37□□□□□ -0.43
RTN4-202ENST00000337526 UFSP2Q9NUQ7 469 aa12.37□□□□□ -0.43
RTN4-202ENST00000337526 MRPS2Q9Y399 296 aaKnown RBP12.37□□□□□ -0.43
RTN4-202ENST00000337526 F6UZH7 168 aa12.36□□□□□ -0.43
RTN4-202ENST00000337526 ENSAO43768 121 aaKnown RBP12.36□□□□□ -0.43
RTN4-202ENST00000337526 ZNF117Q03924 483 aa12.36□□□□□ -0.43
RTN4-202ENST00000337526 SCGB2A2Q13296 93 aa12.36□□□□□ -0.43
RTN4-202ENST00000337526 PLA1AQ53H76 456 aa12.36□□□□□ -0.43
RTN4-202ENST00000337526 OR4D11Q8NGI4 311 aa12.36□□□□□ -0.43
RTN4-202ENST00000337526 C1QTNF6Q9BXI9 259 aa12.36□□□□□ -0.43
RTN4-202ENST00000337526 FOXQ1Q9C009 403 aa12.36□□□□□ -0.43
RTN4-202ENST00000337526 PPP1R3CQ9UQK1 317 aa12.36□□□□□ -0.43
RTN4-202ENST00000337526 UBR3Q6ZT12 1888 aa12.36□□□□□ -0.43
RTN4-202ENST00000337526 ALPK2Q86TB3 2170 aa12.36□□□□□ -0.43
RTN4-202ENST00000337526 C4orf47A7E2U8 309 aa12.36□□□□□ -0.43
RTN4-202ENST00000337526 BHLHE40O14503 412 aa12.36□□□□□ -0.43
RTN4-202ENST00000337526 B4GALT1P15291 398 aa12.36□□□□□ -0.43
RTN4-202ENST00000337526 DRD3P35462 400 aa12.36□□□□□ -0.43
RTN4-202ENST00000337526 DUSP2Q05923 314 aa12.36□□□□□ -0.43
RTN4-202ENST00000337526 FMODQ06828 376 aa12.36□□□□□ -0.43
RTN4-202ENST00000337526 ELFN2Q5R3F8 820 aa12.36□□□□□ -0.43
RTN4-202ENST00000337526 PRAMEF5Q5TYX0 476 aa12.36□□□□□ -0.43
RTN4-202ENST00000337526 PRAMEF6Q5VXH4 476 aa12.36□□□□□ -0.43
RTN4-202ENST00000337526 SIGIRRQ6IA17 410 aa12.36□□□□□ -0.43
RTN4-202ENST00000337526 PRSS42Q7Z5A4 293 aa12.36□□□□□ -0.43
RTN4-202ENST00000337526 S100A7AQ86SG5 101 aa12.36□□□□□ -0.43
RTN4-202ENST00000337526 SLC35G3Q8N808 338 aa12.36□□□□□ -0.43
RTN4-202ENST00000337526 COX14Q96I36 57 aa12.36□□□□□ -0.43
RTN4-202ENST00000337526 MENTQ9BUN1 341 aa12.36□□□□□ -0.43
RTN4-202ENST00000337526 TWSG1Q9GZX9 223 aa12.36□□□□□ -0.43
RTN4-202ENST00000337526 OSGIN2Q9Y236 505 aa12.36□□□□□ -0.43
RTN4-202ENST00000337526 ZNF92Q03936 586 aa12.36□□□□□ -0.43
RTN4-202ENST00000337526 NRTNQ99748 197 aa12.36□□□□□ -0.43
RTN4-202ENST00000337526 ANKUB1A6NFN9 424 aa12.35□□□□□ -0.43
RTN4-202ENST00000337526 NPIPB8E9PQR5 432 aa12.35□□□□□ -0.43
RTN4-202ENST00000337526 GPANK1O95872 356 aa12.35□□□□□ -0.43
RTN4-202ENST00000337526 OR8U8P0C7N1 319 aa12.35□□□□□ -0.43
RTN4-202ENST00000337526 HLXQ14774 488 aaPredicted RBP12.35□□□□□ -0.43
RTN4-202ENST00000337526 ZNF573Q86YE8 665 aa12.35□□□□□ -0.43
RTN4-202ENST00000337526 THNSL2Q86YJ6 484 aa12.35□□□□□ -0.43
RTN4-202ENST00000337526 OR5M8Q8NGP6 311 aa12.35□□□□□ -0.43
RTN4-202ENST00000337526 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.35□□□□□ -0.43
RTN4-202ENST00000337526 CACNA1IQ9P0X4 2223 aa12.35□□□□□ -0.43
RTN4-202ENST00000337526 PRSS44E7EML9 344 aa12.35□□□□□ -0.43
RTN4-202ENST00000337526 PDGFBP01127 241 aaPredicted RBP12.35□□□□□ -0.43
RTN4-202ENST00000337526 SRFP11831 508 aa12.35□□□□□ -0.43
RTN4-202ENST00000337526 HAAOP46952 286 aa12.35□□□□□ -0.43
RTN4-202ENST00000337526 CDONQ4KMG0 1287 aa12.35□□□□□ -0.43
RTN4-202ENST00000337526 CBLN3Q6UW01 205 aa12.35□□□□□ -0.43
RTN4-202ENST00000337526 LSRQ86X29 649 aaPredicted RBP12.35□□□□□ -0.43
RTN4-202ENST00000337526 IFI44Q8TCB0 444 aa12.35□□□□□ -0.43
RTN4-202ENST00000337526 SPACA9Q96E40 222 aaPredicted RBP12.35□□□□□ -0.43
RTN4-202ENST00000337526 TGIF2Q9GZN2 237 aa12.35□□□□□ -0.43
RTN4-202ENST00000337526 RHOFQ9HBH0 211 aa12.35□□□□□ -0.43
RTN4-202ENST00000337526 V9GYH0 126 aa12.35□□□□□ -0.43
RTN4-202ENST00000337526 METTL12A8MUP2 240 aa12.35□□□□□ -0.43
RTN4-202ENST00000337526 LINC01565O15544 149 aa12.35□□□□□ -0.43
RTN4-202ENST00000337526 CTAG2O75638 210 aa12.35□□□□□ -0.43
RTN4-202ENST00000337526 OR8B8Q15620 311 aa12.35□□□□□ -0.43
RTN4-202ENST00000337526 OR2B11Q5JQS5 317 aa12.35□□□□□ -0.43
RTN4-202ENST00000337526 CATSPERDQ86XM0 798 aa12.35□□□□□ -0.43
RTN4-202ENST00000337526 CLRN3Q8NCR9 226 aa12.35□□□□□ -0.43
RTN4-202ENST00000337526 NGBQ9NPG2 151 aa12.35□□□□□ -0.43
RTN4-202ENST00000337526 AQP8O94778 261 aa12.35□□□□□ -0.43
RTN4-202ENST00000337526 WISP3O95389 354 aaPredicted RBP12.35□□□□□ -0.43
RTN4-202ENST00000337526 CCL11P51671 97 aa12.35□□□□□ -0.43
RTN4-202ENST00000337526 MYBPHQ13203 477 aa12.35□□□□□ -0.43
RTN4-202ENST00000337526 OR8G1Q15617 311 aa12.35□□□□□ -0.43
RTN4-202ENST00000337526 DMKNQ6E0U4 476 aaPredicted RBP12.35□□□□□ -0.43
RTN4-202ENST00000337526 ZNF425Q6IV72 752 aa12.35□□□□□ -0.43
RTN4-202ENST00000337526 C6orf15Q6UXA7 325 aaPredicted RBP12.35□□□□□ -0.43
RTN4-202ENST00000337526 OSR2Q8N2R0 312 aa12.35□□□□□ -0.43
RTN4-202ENST00000337526 RXFP4Q8TDU9 374 aa12.35□□□□□ -0.43
RTN4-202ENST00000337526 RPP25Q9BUL9 199 aaKnown RBP12.35□□□□□ -0.43
RTN4-202ENST00000337526 RNF150Q9ULK6 438 aa12.35□□□□□ -0.43
RTN4-202ENST00000337526 MYF5P13349 255 aa12.34□□□□□ -0.43
RTN4-202ENST00000337526 CLDN15P56746 228 aa12.34□□□□□ -0.43
RTN4-202ENST00000337526 Q6ZS52 159 aa12.34□□□□□ -0.43
RTN4-202ENST00000337526 ZDHHC22Q8N966 263 aa12.34□□□□□ -0.43
RTN4-202ENST00000337526 ZNF764Q96H86 408 aaPredicted RBP12.34□□□□□ -0.43
RTN4-202ENST00000337526 ALKBH3Q96Q83 286 aaPredicted RBP12.34□□□□□ -0.43
RTN4-202ENST00000337526 GVINP1Q7Z2Y8 2422 aa12.34□□□□□ -0.43
RTN4-202ENST00000337526 SHISA8B8ZZ34 492 aa12.34□□□□□ -0.43
RTN4-202ENST00000337526 SIRPB1O00241 398 aa12.34□□□□□ -0.43
RTN4-202ENST00000337526 CBR3O75828 277 aa12.34□□□□□ -0.43
RTN4-202ENST00000337526 EPPINO95925 133 aa12.34□□□□□ -0.43
RTN4-202ENST00000337526 CT62P0C5K7 136 aa12.34□□□□□ -0.43
RTN4-202ENST00000337526 CD96P40200 585 aa12.34□□□□□ -0.43
RTN4-202ENST00000337526 HABP2Q14520 560 aaPredicted RBP12.34□□□□□ -0.43
RTN4-202ENST00000337526 ZIC1Q15915 447 aa12.34□□□□□ -0.43
RTN4-202ENST00000337526 ZNF626Q68DY1 528 aa12.34□□□□□ -0.43
RTN4-202ENST00000337526 DEGS2Q6QHC5 323 aa12.34□□□□□ -0.43
RTN4-202ENST00000337526 NAA40Q86UY6 237 aa12.34□□□□□ -0.43
RTN4-202ENST00000337526 AKR7LQ8NHP1 331 aa12.34□□□□□ -0.43
RTN4-202ENST00000337526 CMBLQ96DG6 245 aa12.34□□□□□ -0.43
RTN4-202ENST00000337526 LURAP1Q96LR2 239 aa12.34□□□□□ -0.43
RTN4-202ENST00000337526 SH2D1BO14796 132 aa12.34□□□□□ -0.43
RTN4-202ENST00000337526 MGST1P10620 155 aaKnown RBP12.34□□□□□ -0.43
RTN4-202ENST00000337526 RAB1AP62820 205 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms