RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 TIAF1O95411 115 aa10.89□□□□□ -0.67
VPS33B-201ENST00000333371 DUS4LO95620 317 aaKnown RBP10.89□□□□□ -0.67
VPS33B-201ENST00000333371 ZNF20P17024 532 aa10.89□□□□□ -0.67
VPS33B-201ENST00000333371 HLA-GP17693 338 aa10.89□□□□□ -0.67
VPS33B-201ENST00000333371 ZP4Q12836 540 aa10.89□□□□□ -0.67
VPS33B-201ENST00000333371 TMPRSS9Q7Z410 1059 aa10.89□□□□□ -0.67
VPS33B-201ENST00000333371 HOGA1Q86XE5 327 aa10.89□□□□□ -0.67
VPS33B-201ENST00000333371 CBLN2Q8IUK8 224 aa10.89□□□□□ -0.67
VPS33B-201ENST00000333371 PIK3IP1Q96FE7 263 aa10.89□□□□□ -0.67
VPS33B-201ENST00000333371 ARHGAP5-AS1Q96IT6 56 aa10.89□□□□□ -0.67
VPS33B-201ENST00000333371 C1orf147Q96MC9 270 aaPredicted RBP10.89□□□□□ -0.67
VPS33B-201ENST00000333371 TSNAXQ99598 290 aaKnown RBP10.89□□□□□ -0.67
VPS33B-201ENST00000333371 DNTTIP1Q9H147 329 aa10.89□□□□□ -0.67
VPS33B-201ENST00000333371 SAV1Q9H4B6 383 aaPredicted RBP10.89□□□□□ -0.67
VPS33B-201ENST00000333371 OR5AC2Q9NZP5 309 aa10.89□□□□□ -0.67
VPS33B-201ENST00000333371 KLRF1Q9NZS2 232 aa10.89□□□□□ -0.67
VPS33B-201ENST00000333371 DBX1A6NMT0 343 aa10.89□□□□□ -0.67
VPS33B-201ENST00000333371 ZNF17P17021 662 aa10.89□□□□□ -0.67
VPS33B-201ENST00000333371 ZNF121P58317 390 aaPredicted RBP10.89□□□□□ -0.67
VPS33B-201ENST00000333371 DEGS2Q6QHC5 323 aa10.89□□□□□ -0.67
VPS33B-201ENST00000333371 DTX1Q86Y01 620 aa10.89□□□□□ -0.67
VPS33B-201ENST00000333371 OR51F2Q8NH61 342 aa10.89□□□□□ -0.67
VPS33B-201ENST00000333371 ZNF501Q96CX3 271 aaPredicted RBP10.89□□□□□ -0.67
VPS33B-201ENST00000333371 LIN37Q96GY3 246 aaPredicted RBP10.89□□□□□ -0.67
VPS33B-201ENST00000333371 OR2S2Q9NQN1 319 aa10.89□□□□□ -0.67
VPS33B-201ENST00000333371 PCDHB16Q9NRJ7 776 aa10.89□□□□□ -0.67
VPS33B-201ENST00000333371 VSTM2BA6NLU5 285 aa10.88□□□□□ -0.67
VPS33B-201ENST00000333371 ATG12O94817 140 aa10.88□□□□□ -0.67
VPS33B-201ENST00000333371 HCKP08631 526 aa10.88□□□□□ -0.67
VPS33B-201ENST00000333371 LAP3P28838 519 aa10.88□□□□□ -0.67
VPS33B-201ENST00000333371 SFTPDP35247 375 aa10.88□□□□□ -0.67
VPS33B-201ENST00000333371 CLRN1P58418 232 aa10.88□□□□□ -0.67
VPS33B-201ENST00000333371 C17orf67Q0P5P2 114 aa10.88□□□□□ -0.67
VPS33B-201ENST00000333371 LYSMD4Q5XG99 296 aa10.88□□□□□ -0.67
VPS33B-201ENST00000333371 Q7L0L9 218 aa10.88□□□□□ -0.67
VPS33B-201ENST00000333371 C1QL2Q7Z5L3 287 aa10.88□□□□□ -0.67
VPS33B-201ENST00000333371 KMT5CQ86Y97 462 aa10.88□□□□□ -0.67
VPS33B-201ENST00000333371 FOXRED2Q8IWF2 684 aa10.88□□□□□ -0.67
VPS33B-201ENST00000333371 GTPBP8Q8N3Z3 284 aaPredicted RBP10.88□□□□□ -0.67
VPS33B-201ENST00000333371 RAB3CQ96E17 227 aa10.88□□□□□ -0.67
VPS33B-201ENST00000333371 ST6GALNAC5Q9BVH7 336 aa10.88□□□□□ -0.67
VPS33B-201ENST00000333371 COLQQ9Y215 455 aaPredicted RBP10.88□□□□□ -0.67
VPS33B-201ENST00000333371 TRBV11-1A0A0K0K1C0 115 aa10.88□□□□□ -0.67
VPS33B-201ENST00000333371 A0A1B0GW55 424 aa10.88□□□□□ -0.67
VPS33B-201ENST00000333371 CDC14BO60729 498 aa10.88□□□□□ -0.67
VPS33B-201ENST00000333371 CRTAPO75718 401 aaPredicted RBP10.88□□□□□ -0.67
VPS33B-201ENST00000333371 DUX4L2P0CJ85 424 aa10.88□□□□□ -0.67
VPS33B-201ENST00000333371 DUX4L3P0CJ86 424 aa10.88□□□□□ -0.67
VPS33B-201ENST00000333371 DUX4L4P0CJ87 422 aa10.88□□□□□ -0.67
VPS33B-201ENST00000333371 DUX4L5P0CJ88 424 aa10.88□□□□□ -0.67
VPS33B-201ENST00000333371 DUX4L6P0CJ89 424 aa10.88□□□□□ -0.67
VPS33B-201ENST00000333371 DUX4L7P0CJ90 424 aa10.88□□□□□ -0.67
VPS33B-201ENST00000333371 GIMD1P0DJR0 217 aa10.88□□□□□ -0.67
VPS33B-201ENST00000333371 ANKRD55Q3KP44 614 aa10.88□□□□□ -0.67
VPS33B-201ENST00000333371 WDR74Q6RFH5 385 aaPredicted RBP10.88□□□□□ -0.67
VPS33B-201ENST00000333371 CLEC18BQ6UXF7 455 aa10.88□□□□□ -0.67
VPS33B-201ENST00000333371 LDLRAD3Q86YD5 345 aa10.88□□□□□ -0.67
VPS33B-201ENST00000333371 TERB2Q8NHR7 220 aa10.88□□□□□ -0.67
VPS33B-201ENST00000333371 POC1BQ8TC44 478 aa10.88□□□□□ -0.67
VPS33B-201ENST00000333371 ST8SIA1Q92185 356 aa10.88□□□□□ -0.67
VPS33B-201ENST00000333371 DDIT4LQ96D03 193 aa10.88□□□□□ -0.67
VPS33B-201ENST00000333371 OR10C1Q96KK4 312 aa10.88□□□□□ -0.67
VPS33B-201ENST00000333371 GPER1Q99527 375 aa10.88□□□□□ -0.67
VPS33B-201ENST00000333371 MRPL13Q9BYD1 178 aaKnown RBP10.88□□□□□ -0.67
VPS33B-201ENST00000333371 CYTL1Q9NRR1 136 aa10.88□□□□□ -0.67
VPS33B-201ENST00000333371 DUX4Q9UBX2 424 aa10.88□□□□□ -0.67
VPS33B-201ENST00000333371 TMEM218A2RU14 115 aa10.88□□□□□ -0.67
VPS33B-201ENST00000333371 IL32P24001 234 aa10.88□□□□□ -0.67
VPS33B-201ENST00000333371 APOBEC1P41238 236 aaKnown RBP10.88□□□□□ -0.67
VPS33B-201ENST00000333371 SUPT4H1P63272 117 aaKnown RBP10.88□□□□□ -0.67
VPS33B-201ENST00000333371 SGCAQ16586 387 aa10.88□□□□□ -0.67
VPS33B-201ENST00000333371 ZNF529Q6P280 563 aa10.88□□□□□ -0.67
VPS33B-201ENST00000333371 FAM57BQ71RH2 274 aa10.88□□□□□ -0.67
VPS33B-201ENST00000333371 OR10G3Q8NGC4 313 aa10.88□□□□□ -0.67
VPS33B-201ENST00000333371 UQCC2Q9BRT2 126 aa10.88□□□□□ -0.67
VPS33B-201ENST00000333371 PIGMQ9H3S5 423 aa10.88□□□□□ -0.67
VPS33B-201ENST00000333371 IGKV1-9A0A0C4DH69 117 aa10.87□□□□□ -0.67
VPS33B-201ENST00000333371 GLRA1P23415 457 aa10.87□□□□□ -0.67
VPS33B-201ENST00000333371 NKAPLQ5M9Q1 402 aa10.87□□□□□ -0.67
VPS33B-201ENST00000333371 DRAM2Q6UX65 266 aa10.87□□□□□ -0.67
VPS33B-201ENST00000333371 ANKRD37Q7Z713 158 aa10.87□□□□□ -0.67
VPS33B-201ENST00000333371 OR4A4PQ8NGN8 299 aa10.87□□□□□ -0.67
VPS33B-201ENST00000333371 PHYHIPLQ96FC7 376 aa10.87□□□□□ -0.67
VPS33B-201ENST00000333371 CPNE2Q96FN4 548 aaPredicted RBP10.87□□□□□ -0.67
VPS33B-201ENST00000333371 OR5B2Q96R09 309 aa10.87□□□□□ -0.67
VPS33B-201ENST00000333371 TMEM59Q9BXS4 323 aa10.87□□□□□ -0.67
VPS33B-201ENST00000333371 TLNRD1Q9H1K6 362 aa10.87□□□□□ -0.67
VPS33B-201ENST00000333371 ZNF768Q9H5H4 540 aaKnown RBP10.87□□□□□ -0.67
VPS33B-201ENST00000333371 HPF1Q9NWY4 346 aa10.87□□□□□ -0.67
VPS33B-201ENST00000333371 FAM96BQ9Y3D0 163 aa10.87□□□□□ -0.67
VPS33B-201ENST00000333371 HIST1H1DP16402 221 aaKnown RBP10.87□□□□□ -0.67
VPS33B-201ENST00000333371 PRKACAP17612 351 aa10.87□□□□□ -0.67
VPS33B-201ENST00000333371 MPZP25189 248 aa10.87□□□□□ -0.67
VPS33B-201ENST00000333371 ARFRP1Q13795 201 aa10.87□□□□□ -0.67
VPS33B-201ENST00000333371 PABPC1L2AQ5JQF8 200 aa10.87□□□□□ -0.67
VPS33B-201ENST00000333371 DTWD2Q8NBA8 298 aa10.87□□□□□ -0.67
VPS33B-201ENST00000333371 NFAM1Q8NET5 270 aaPredicted RBP10.87□□□□□ -0.67
VPS33B-201ENST00000333371 ALKBH4Q9NXW9 302 aa10.87□□□□□ -0.67
VPS33B-201ENST00000333371 PPP4R1LQ9P1A2 415 aa10.87□□□□□ -0.67
VPS33B-201ENST00000333371 GPR132Q9UNW8 380 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms