RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 C1orf87Q8N0U7 546 aa11.83□□□□□ -0.52
LIMS1-201ENST00000332345 OR8B12Q8NGG6 310 aa11.83□□□□□ -0.52
LIMS1-201ENST00000332345 RAB39BQ96DA2 213 aa11.83□□□□□ -0.52
LIMS1-201ENST00000332345 RNFT2Q96EX2 444 aa11.83□□□□□ -0.52
LIMS1-201ENST00000332345 C1orf159Q96HA4 380 aa11.83□□□□□ -0.52
LIMS1-201ENST00000332345 MYCBPQ99417 103 aaPredicted RBP11.83□□□□□ -0.52
LIMS1-201ENST00000332345 TBX5Q99593 518 aa11.83□□□□□ -0.52
LIMS1-201ENST00000332345 ADAT1Q9BUB4 502 aaKnown RBP11.83□□□□□ -0.52
LIMS1-201ENST00000332345 TTTY10Q9BZA0 68 aa11.83□□□□□ -0.52
LIMS1-201ENST00000332345 PBOV1Q9GZY1 135 aa11.83□□□□□ -0.52
LIMS1-201ENST00000332345 C14orf119Q9NWQ9 140 aa11.83□□□□□ -0.52
LIMS1-201ENST00000332345 FAM206AQ9NX38 181 aa11.83□□□□□ -0.52
LIMS1-201ENST00000332345 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.82□□□□□ -0.52
LIMS1-201ENST00000332345 ISPDA4D126 451 aa11.82□□□□□ -0.52
LIMS1-201ENST00000332345 ERICH4A6NGS2 130 aa11.82□□□□□ -0.52
LIMS1-201ENST00000332345 METTL15A6NJ78 407 aa11.82□□□□□ -0.52
LIMS1-201ENST00000332345 PRR32B1ATL7 298 aa11.82□□□□□ -0.52
LIMS1-201ENST00000332345 B4DSR2 109 aa11.82□□□□□ -0.52
LIMS1-201ENST00000332345 TMEM178BH3BS89 294 aa11.82□□□□□ -0.52
LIMS1-201ENST00000332345 WNT9BO14905 357 aa11.82□□□□□ -0.52
LIMS1-201ENST00000332345 LMX1BO60663 402 aa11.82□□□□□ -0.52
LIMS1-201ENST00000332345 APOL3O95236 402 aa11.82□□□□□ -0.52
LIMS1-201ENST00000332345 ATP6V1B1P15313 513 aa11.82□□□□□ -0.52
LIMS1-201ENST00000332345 IL2RGP31785 369 aa11.82□□□□□ -0.52
LIMS1-201ENST00000332345 MAP2K3P46734 347 aa11.82□□□□□ -0.52
LIMS1-201ENST00000332345 CDH15P55291 814 aa11.82□□□□□ -0.52
LIMS1-201ENST00000332345 ACTC1P68032 377 aa11.82□□□□□ -0.52
LIMS1-201ENST00000332345 ACTA1P68133 377 aa11.82□□□□□ -0.52
LIMS1-201ENST00000332345 ELF3P78545 371 aaPredicted RBP11.82□□□□□ -0.52
LIMS1-201ENST00000332345 OR8B8Q15620 311 aa11.82□□□□□ -0.52
LIMS1-201ENST00000332345 TTC23Q5W5X9 447 aa11.82□□□□□ -0.52
LIMS1-201ENST00000332345 PLEKHG7Q6ZR37 379 aa11.82□□□□□ -0.52
LIMS1-201ENST00000332345 KCTD20Q7Z5Y7 419 aa11.82□□□□□ -0.52
LIMS1-201ENST00000332345 MOGAT3Q86VF5 341 aa11.82□□□□□ -0.52
LIMS1-201ENST00000332345 ENTHD1Q8IYW4 607 aa11.82□□□□□ -0.52
LIMS1-201ENST00000332345 RFLNBQ8N5W9 214 aa11.82□□□□□ -0.52
LIMS1-201ENST00000332345 YIPF7Q8N8F6 280 aa11.82□□□□□ -0.52
LIMS1-201ENST00000332345 OR11L1Q8NGX0 322 aa11.82□□□□□ -0.52
LIMS1-201ENST00000332345 OR8S1Q8NH09 359 aa11.82□□□□□ -0.52
LIMS1-201ENST00000332345 ZNF420Q8TAQ5 688 aaPredicted RBP11.82□□□□□ -0.52
LIMS1-201ENST00000332345 GAL3ST1Q99999 423 aa11.82□□□□□ -0.52
LIMS1-201ENST00000332345 ZNF665Q9H7R5 613 aa11.82□□□□□ -0.52
LIMS1-201ENST00000332345 MOB1AQ9H8S9 216 aa11.82□□□□□ -0.52
LIMS1-201ENST00000332345 FN3KRPQ9HA64 309 aa11.82□□□□□ -0.52
LIMS1-201ENST00000332345 ABCB9Q9NP78 766 aa11.82□□□□□ -0.52
LIMS1-201ENST00000332345 NUFIP1Q9UHK0 495 aaKnown RBP11.82□□□□□ -0.52
LIMS1-201ENST00000332345 MRM2Q9UI43 246 aaKnown RBP11.82□□□□□ -0.52
LIMS1-201ENST00000332345 KCNS2Q9ULS6 477 aa11.82□□□□□ -0.52
LIMS1-201ENST00000332345 GTF2A1LQ9UNN4 478 aa11.82□□□□□ -0.52
LIMS1-201ENST00000332345 SNX5Q9Y5X3 404 aa11.82□□□□□ -0.52
LIMS1-201ENST00000332345 R4GMQ9 66 aa11.82□□□□□ -0.52
LIMS1-201ENST00000332345 C2CD3Q4AC94 2353 aa11.82□□□□□ -0.52
LIMS1-201ENST00000332345 NSD1Q96L73 2696 aaPredicted RBP11.81□□□□□ -0.52
LIMS1-201ENST00000332345 IGHV3-64DA0A0J9YX35 117 aa11.81□□□□□ -0.52
LIMS1-201ENST00000332345 DAPL1A0PJW8 107 aa11.81□□□□□ -0.52
LIMS1-201ENST00000332345 LOC110117498-PIK3R3F6TDL0 507 aa11.81□□□□□ -0.52
LIMS1-201ENST00000332345 DLGAP1O14490 977 aa11.81□□□□□ -0.52
LIMS1-201ENST00000332345 MAGEB4O15481 346 aaPredicted RBP11.81□□□□□ -0.52
LIMS1-201ENST00000332345 MTRF1O75570 445 aaKnown RBP11.81□□□□□ -0.52
LIMS1-201ENST00000332345 PNPP00491 289 aa11.81□□□□□ -0.52
LIMS1-201ENST00000332345 GABRB1P18505 474 aa11.81□□□□□ -0.52
LIMS1-201ENST00000332345 BTG1P62324 171 aa11.81□□□□□ -0.52
LIMS1-201ENST00000332345 LRRC28Q86X40 367 aaPredicted RBP11.81□□□□□ -0.52
LIMS1-201ENST00000332345 COMMD2Q86X83 199 aa11.81□□□□□ -0.52
LIMS1-201ENST00000332345 KLHL36Q8N4N3 616 aa11.81□□□□□ -0.52
LIMS1-201ENST00000332345 DHRSXQ8N5I4 330 aa11.81□□□□□ -0.52
LIMS1-201ENST00000332345 Q8TCH9 128 aa11.81□□□□□ -0.52
LIMS1-201ENST00000332345 MRPL48Q96GC5 212 aaKnown RBP11.81□□□□□ -0.52
LIMS1-201ENST00000332345 LYZL4Q96KX0 146 aa11.81□□□□□ -0.52
LIMS1-201ENST00000332345 SIGLEC11Q96RL6 698 aa11.81□□□□□ -0.52
LIMS1-201ENST00000332345 SOX7Q9BT81 388 aa11.81□□□□□ -0.52
LIMS1-201ENST00000332345 VCXQ9H320 206 aa11.81□□□□□ -0.52
LIMS1-201ENST00000332345 TMEM160Q9NX00 188 aa11.81□□□□□ -0.52
LIMS1-201ENST00000332345 DCAF16Q9NXF7 216 aa11.81□□□□□ -0.52
LIMS1-201ENST00000332345 OR52A1Q9UKL2 312 aa11.81□□□□□ -0.52
LIMS1-201ENST00000332345 PCDHB10Q9UN67 800 aa11.81□□□□□ -0.52
LIMS1-201ENST00000332345 EXOGQ9Y2C4 368 aaKnown RBP11.81□□□□□ -0.52
LIMS1-201ENST00000332345 RHBDD3Q9Y3P4 386 aa11.81□□□□□ -0.52
LIMS1-201ENST00000332345 RPL36Q9Y3U8 105 aaKnown RBP11.81□□□□□ -0.52
LIMS1-201ENST00000332345 MPC1Q9Y5U8 109 aa11.81□□□□□ -0.52
LIMS1-201ENST00000332345 SONP18583 2426 aaKnown RBP11.8□□□□□ -0.52
LIMS1-201ENST00000332345 ANXA2P2A6NMY6 339 aa11.8□□□□□ -0.52
LIMS1-201ENST00000332345 CASQ2O14958 399 aaPredicted RBP11.8□□□□□ -0.52
LIMS1-201ENST00000332345 RPP14O95059 124 aaKnown RBP11.8□□□□□ -0.52
LIMS1-201ENST00000332345 PTBP3O95758 552 aaKnown RBP11.8□□□□□ -0.52
LIMS1-201ENST00000332345 CST4P01036 141 aa11.8□□□□□ -0.52
LIMS1-201ENST00000332345 IGHV2-70P01814 119 aa11.8□□□□□ -0.52
LIMS1-201ENST00000332345 GRPP07492 148 aa11.8□□□□□ -0.52
LIMS1-201ENST00000332345 ZNF16P17020 682 aaPredicted RBP11.8□□□□□ -0.52
LIMS1-201ENST00000332345 PEX2P28328 305 aa11.8□□□□□ -0.52
LIMS1-201ENST00000332345 MDH2P40926 338 aaKnown RBP11.8□□□□□ -0.52
LIMS1-201ENST00000332345 IL5RAQ01344 420 aa11.8□□□□□ -0.52
LIMS1-201ENST00000332345 RIPPLY1Q0D2K3 151 aa11.8□□□□□ -0.52
LIMS1-201ENST00000332345 TMEM155Q4W5P6 130 aa11.8□□□□□ -0.52
LIMS1-201ENST00000332345 KLHL22Q53GT1 634 aa11.8□□□□□ -0.52
LIMS1-201ENST00000332345 ZNF684Q5T5D7 378 aa11.8□□□□□ -0.52
LIMS1-201ENST00000332345 BCL2L15Q5TBC7 163 aa11.8□□□□□ -0.52
LIMS1-201ENST00000332345 OGFRL1Q5TC84 451 aaPredicted RBP11.8□□□□□ -0.52
LIMS1-201ENST00000332345 LIPNQ5VXI9 398 aa11.8□□□□□ -0.52
LIMS1-201ENST00000332345 SSX6Q7RTT6 188 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms