RNA–Protein interactions for RNA: ENST00000331148.5

CLSTN3-202, Transcript of calsyntenin 3, humanhuman

TSL 1 (best)

Gene CLSTN3, Length 2,288 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-202ENST00000331148 OR2A2Q6IF42 318 aa16.09■□□□□ 0.17
CLSTN3-202ENST00000331148 GPBAR1Q8TDU6 330 aa16.09■□□□□ 0.17
CLSTN3-202ENST00000331148 DNAJA3Q96EY1 480 aa16.09■□□□□ 0.17
CLSTN3-202ENST00000331148 KLHDC7BQ96G42 594 aa16.09■□□□□ 0.17
CLSTN3-202ENST00000331148 STARD5Q9NSY2 213 aa16.09■□□□□ 0.17
CLSTN3-202ENST00000331148 GSKIPQ9P0R6 139 aa16.09■□□□□ 0.17
CLSTN3-202ENST00000331148 CACNA1CQ13936 2221 aa16.09■□□□□ 0.17
CLSTN3-202ENST00000331148 MPDZO75970 2070 aa16.09■□□□□ 0.17
CLSTN3-202ENST00000331148 IGLV1-36A0A0B4J1U3 117 aa16.08■□□□□ 0.17
CLSTN3-202ENST00000331148 PRSS37A4D1T9 235 aa16.08■□□□□ 0.17
CLSTN3-202ENST00000331148 CEACAM18A8MTB9 384 aa16.08■□□□□ 0.17
CLSTN3-202ENST00000331148 IFNA17P01571 189 aa16.08■□□□□ 0.17
CLSTN3-202ENST00000331148 RHEBQ15382 184 aa16.08■□□□□ 0.17
CLSTN3-202ENST00000331148 FNDC7Q5VTL7 733 aa16.08■□□□□ 0.17
CLSTN3-202ENST00000331148 NSUN5P2Q63ZY6 315 aa16.08■□□□□ 0.17
CLSTN3-202ENST00000331148 C1QL4Q86Z23 238 aa16.08■□□□□ 0.17
CLSTN3-202ENST00000331148 SPEM1Q8N4L4 309 aa16.08■□□□□ 0.17
CLSTN3-202ENST00000331148 OR52N5Q8NH56 324 aa16.08■□□□□ 0.17
CLSTN3-202ENST00000331148 MAP3K3Q99759 626 aa16.08■□□□□ 0.17
CLSTN3-202ENST00000331148 GPR27Q9NS67 375 aa16.08■□□□□ 0.17
CLSTN3-202ENST00000331148 LRP4O75096 1905 aa16.08■□□□□ 0.17
CLSTN3-202ENST00000331148 IFITM10A6NMD0 228 aa16.08■□□□□ 0.16
CLSTN3-202ENST00000331148 YIF1AO95070 293 aa16.08■□□□□ 0.16
CLSTN3-202ENST00000331148 LY86O95711 162 aa16.08■□□□□ 0.16
CLSTN3-202ENST00000331148 BPNT1O95861 308 aa16.08■□□□□ 0.16
CLSTN3-202ENST00000331148 IFNA2P01563 188 aa16.08■□□□□ 0.16
CLSTN3-202ENST00000331148 INSM1Q01101 510 aaPredicted RBP16.08■□□□□ 0.16
CLSTN3-202ENST00000331148 FZD2Q14332 565 aa16.08■□□□□ 0.16
CLSTN3-202ENST00000331148 ZNF239Q16600 458 aaKnown RBP16.08■□□□□ 0.16
CLSTN3-202ENST00000331148 GUK1Q16774 197 aa16.08■□□□□ 0.16
CLSTN3-202ENST00000331148 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.08■□□□□ 0.16
CLSTN3-202ENST00000331148 MIDNQ504T8 468 aa16.08■□□□□ 0.16
CLSTN3-202ENST00000331148 ZNF542PQ5EBM4 170 aa16.08■□□□□ 0.16
CLSTN3-202ENST00000331148 VAX1Q5SQQ9 334 aa16.08■□□□□ 0.16
CLSTN3-202ENST00000331148 OR9K2Q8NGE7 335 aa16.08■□□□□ 0.16
CLSTN3-202ENST00000331148 KLHDC3Q9BQ90 382 aa16.08■□□□□ 0.16
CLSTN3-202ENST00000331148 SCRT1Q9BWW7 348 aa16.08■□□□□ 0.16
CLSTN3-202ENST00000331148 PARP12Q9H0J9 701 aaKnown RBP16.08■□□□□ 0.16
CLSTN3-202ENST00000331148 TCEAL2Q9H3H9 227 aaPredicted RBP16.08■□□□□ 0.16
CLSTN3-202ENST00000331148 G6PC2Q9NQR9 355 aa16.08■□□□□ 0.16
CLSTN3-202ENST00000331148 FBXL17Q9UF56 701 aa16.08■□□□□ 0.16
CLSTN3-202ENST00000331148 OR52A1Q9UKL2 312 aa16.08■□□□□ 0.16
CLSTN3-202ENST00000331148 AMDHD2Q9Y303 409 aa16.08■□□□□ 0.16
CLSTN3-202ENST00000331148 C2orf74A8MZ97 194 aa16.07■□□□□ 0.16
CLSTN3-202ENST00000331148 ST8SIA5O15466 376 aa16.07■□□□□ 0.16
CLSTN3-202ENST00000331148 SCGNO76038 276 aa16.07■□□□□ 0.16
CLSTN3-202ENST00000331148 GAPDHP04406 335 aaKnown RBP16.07■□□□□ 0.16
CLSTN3-202ENST00000331148 ISG15P05161 165 aa16.07■□□□□ 0.16
CLSTN3-202ENST00000331148 HOXB5P09067 269 aa16.07■□□□□ 0.16
CLSTN3-202ENST00000331148 HOXA5P20719 270 aa16.07■□□□□ 0.16
CLSTN3-202ENST00000331148 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.07■□□□□ 0.16
CLSTN3-202ENST00000331148 FOXRED2Q8IWF2 684 aa16.07■□□□□ 0.16
CLSTN3-202ENST00000331148 KDM8Q8N371 416 aa16.07■□□□□ 0.16
CLSTN3-202ENST00000331148 ARRDC1Q8N5I2 433 aa16.07■□□□□ 0.16
CLSTN3-202ENST00000331148 COMMD1Q8N668 190 aa16.07■□□□□ 0.16
CLSTN3-202ENST00000331148 DEFB119Q8N690 84 aa16.07■□□□□ 0.16
CLSTN3-202ENST00000331148 OR52N4Q8NGI2 321 aa16.07■□□□□ 0.16
CLSTN3-202ENST00000331148 OR56B1Q8NGI3 324 aa16.07■□□□□ 0.16
CLSTN3-202ENST00000331148 OR1J1Q8NGS3 322 aa16.07■□□□□ 0.16
CLSTN3-202ENST00000331148 C16orf52Q8NHV5 167 aa16.07■□□□□ 0.16
CLSTN3-202ENST00000331148 METTL21AQ8WXB1 218 aa16.07■□□□□ 0.16
CLSTN3-202ENST00000331148 SGK3Q96BR1 496 aa16.07■□□□□ 0.16
CLSTN3-202ENST00000331148 CHRDQ9H2X0 955 aa16.07■□□□□ 0.16
CLSTN3-202ENST00000331148 SLCO1B1Q9Y6L6 691 aa16.07■□□□□ 0.16
CLSTN3-202ENST00000331148 LOC101059948A0A1B0GTJ6 334 aa16.07■□□□□ 0.16
CLSTN3-202ENST00000331148 METTL12A8MUP2 240 aa16.07■□□□□ 0.16
CLSTN3-202ENST00000331148 UMAD1C9J7I0 102 aa16.07■□□□□ 0.16
CLSTN3-202ENST00000331148 GPR37O15354 613 aa16.07■□□□□ 0.16
CLSTN3-202ENST00000331148 SELLP14151 372 aa16.07■□□□□ 0.16
CLSTN3-202ENST00000331148 CTLA4P16410 223 aa16.07■□□□□ 0.16
CLSTN3-202ENST00000331148 FPR2P25090 351 aa16.07■□□□□ 0.16
CLSTN3-202ENST00000331148 ITGA3P26006 1051 aa16.07■□□□□ 0.16
CLSTN3-202ENST00000331148 MAS1LP35410 378 aa16.07■□□□□ 0.16
CLSTN3-202ENST00000331148 ZNF565Q8N9K5 539 aa16.07■□□□□ 0.16
CLSTN3-202ENST00000331148 CLDN23Q96B33 292 aa16.07■□□□□ 0.16
CLSTN3-202ENST00000331148 RTBDNQ9BSG5 229 aaPredicted RBP16.07■□□□□ 0.16
CLSTN3-202ENST00000331148 ANAPC10Q9UM13 185 aa16.07■□□□□ 0.16
CLSTN3-202ENST00000331148 JTBO76095 146 aa16.06■□□□□ 0.16
CLSTN3-202ENST00000331148 CTSEP14091 401 aa16.06■□□□□ 0.16
CLSTN3-202ENST00000331148 ZNF708P17019 499 aa16.06■□□□□ 0.16
CLSTN3-202ENST00000331148 CD27P26842 260 aa16.06■□□□□ 0.16
CLSTN3-202ENST00000331148 RPL12P30050 165 aaKnown RBP16.06■□□□□ 0.16
CLSTN3-202ENST00000331148 THBS4P35443 961 aa16.06■□□□□ 0.16
CLSTN3-202ENST00000331148 BLKP51451 505 aa16.06■□□□□ 0.16
CLSTN3-202ENST00000331148 CLDN6P56747 220 aa16.06■□□□□ 0.16
CLSTN3-202ENST00000331148 BTG2P78543 158 aa16.06■□□□□ 0.16
CLSTN3-202ENST00000331148 CDPF1Q6NVV7 123 aa16.06■□□□□ 0.16
CLSTN3-202ENST00000331148 PEG10Q86TG7 708 aaKnown RBP16.06■□□□□ 0.16
CLSTN3-202ENST00000331148 ZNF615Q8N8J6 731 aa16.06■□□□□ 0.16
CLSTN3-202ENST00000331148 ZNF383Q8NA42 475 aa16.06■□□□□ 0.16
CLSTN3-202ENST00000331148 ZNF519Q8TB69 540 aa16.06■□□□□ 0.16
CLSTN3-202ENST00000331148 GTF3AQ92664 365 aaKnown RBP16.06■□□□□ 0.16
CLSTN3-202ENST00000331148 NUDT16L1Q9BRJ7 211 aaKnown RBP16.06■□□□□ 0.16
CLSTN3-202ENST00000331148 NICN1Q9BSH3 213 aa16.06■□□□□ 0.16
CLSTN3-202ENST00000331148 MEMO1Q9Y316 297 aa16.06■□□□□ 0.16
CLSTN3-202ENST00000331148 P2RY10O00398 339 aa16.06■□□□□ 0.16
CLSTN3-202ENST00000331148 PRKNO60260 465 aaPredicted RBP16.06■□□□□ 0.16
CLSTN3-202ENST00000331148 NME2P1O60361 137 aa16.06■□□□□ 0.16
CLSTN3-202ENST00000331148 BGLAPP02818 100 aa16.06■□□□□ 0.16
CLSTN3-202ENST00000331148 HSD11B1P28845 292 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms