RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 MMP25Q9NPA2 562 aa21.67■■□□□ 1.06
SOX1-201ENST00000330949 KCNIP3Q9Y2W7 256 aa21.67■■□□□ 1.06
SOX1-201ENST00000330949 SPACA6W5XKT8 324 aa21.67■■□□□ 1.06
SOX1-201ENST00000330949 GMFGO60234 142 aa21.67■■□□□ 1.06
SOX1-201ENST00000330949 S1PR1P21453 382 aa21.67■■□□□ 1.06
SOX1-201ENST00000330949 SUCLG1P53597 346 aaKnown RBP21.67■■□□□ 1.06
SOX1-201ENST00000330949 CASP6P55212 293 aa21.67■■□□□ 1.06
SOX1-201ENST00000330949 CCINQ13939 588 aa21.67■■□□□ 1.06
SOX1-201ENST00000330949 LYPD6Q86Y78 171 aa21.67■■□□□ 1.06
SOX1-201ENST00000330949 M1APQ8TC57 530 aa21.67■■□□□ 1.06
SOX1-201ENST00000330949 CTHRC1Q96CG8 243 aa21.67■■□□□ 1.06
SOX1-201ENST00000330949 ARV1Q9H2C2 271 aa21.67■■□□□ 1.06
SOX1-201ENST00000330949 TMEM74BQ9NUR3 256 aa21.67■■□□□ 1.06
SOX1-201ENST00000330949 INSL6Q9Y581 213 aa21.67■■□□□ 1.06
SOX1-201ENST00000330949 GPR89AB7ZAQ6 455 aa21.66■■□□□ 1.06
SOX1-201ENST00000330949 GPR89BP0CG08 455 aa21.66■■□□□ 1.06
SOX1-201ENST00000330949 MYOGP15173 224 aa21.66■■□□□ 1.06
SOX1-201ENST00000330949 RPL18Q07020 188 aaKnown RBP21.66■■□□□ 1.06
SOX1-201ENST00000330949 PDZD11Q5EBL8 140 aa21.66■■□□□ 1.06
SOX1-201ENST00000330949 Q7L0L9 218 aa21.66■■□□□ 1.06
SOX1-201ENST00000330949 DPPA2Q7Z7J5 298 aa21.66■■□□□ 1.06
SOX1-201ENST00000330949 OR4N2Q8NGD1 307 aa21.66■■□□□ 1.06
SOX1-201ENST00000330949 LPAR4Q99677 370 aa21.66■■□□□ 1.06
SOX1-201ENST00000330949 NUDT16L1Q9BRJ7 211 aaKnown RBP21.66■■□□□ 1.06
SOX1-201ENST00000330949 MRPL37Q9BZE1 423 aaKnown RBP21.66■■□□□ 1.06
SOX1-201ENST00000330949 UNKLQ9H9P5 680 aaKnown RBP21.66■■□□□ 1.06
SOX1-201ENST00000330949 B9D1Q9UPM9 204 aa21.66■■□□□ 1.06
SOX1-201ENST00000330949 STRAPQ9Y3F4 350 aaKnown RBP21.66■■□□□ 1.06
SOX1-201ENST00000330949 SPEM2Q0P670 501 aa21.66■■□□□ 1.06
SOX1-201ENST00000330949 UNC119Q13432 240 aa21.66■■□□□ 1.06
SOX1-201ENST00000330949 PEG10Q86TG7 708 aaKnown RBP21.66■■□□□ 1.06
SOX1-201ENST00000330949 LRRC18Q8N456 261 aa21.66■■□□□ 1.06
SOX1-201ENST00000330949 PTGES2Q9H7Z7 377 aa21.66■■□□□ 1.06
SOX1-201ENST00000330949 LYRM4Q9HD34 91 aa21.66■■□□□ 1.06
SOX1-201ENST00000330949 A0A087WWC5 75 aa21.65■■□□□ 1.06
SOX1-201ENST00000330949 A0A1B0GW64 132 aa21.65■■□□□ 1.06
SOX1-201ENST00000330949 A0A1W2PP55 124 aa21.65■■□□□ 1.06
SOX1-201ENST00000330949 ZNF860A6NHJ4 632 aa21.65■■□□□ 1.06
SOX1-201ENST00000330949 ZNF217O75362 1048 aa21.65■■□□□ 1.06
SOX1-201ENST00000330949 ASAH2BP0C7U1 165 aa21.65■■□□□ 1.06
SOX1-201ENST00000330949 PNMTP11086 282 aa21.65■■□□□ 1.06
SOX1-201ENST00000330949 FABP4P15090 132 aa21.65■■□□□ 1.06
SOX1-201ENST00000330949 PI3P19957 117 aa21.65■■□□□ 1.06
SOX1-201ENST00000330949 NUTF2P61970 127 aaKnown RBP21.65■■□□□ 1.06
SOX1-201ENST00000330949 ELOBQ15370 118 aa21.65■■□□□ 1.06
SOX1-201ENST00000330949 FAM78AQ5JUQ0 283 aa21.65■■□□□ 1.06
SOX1-201ENST00000330949 CNTD2Q9H8S5 307 aa21.65■■□□□ 1.06
SOX1-201ENST00000330949 RHBDD3Q9Y3P4 386 aa21.65■■□□□ 1.06
SOX1-201ENST00000330949 GFI1BQ5VTD9 330 aa21.65■■□□□ 1.06
SOX1-201ENST00000330949 OR9A4Q8NGU2 314 aa21.65■■□□□ 1.06
SOX1-201ENST00000330949 SPPL3Q8TCT6 385 aa21.65■■□□□ 1.06
SOX1-201ENST00000330949 Q8WTZ3 238 aa21.65■■□□□ 1.06
SOX1-201ENST00000330949 PRRX2Q99811 253 aa21.65■■□□□ 1.06
SOX1-201ENST00000330949 CERS4Q9HA82 394 aa21.65■■□□□ 1.06
SOX1-201ENST00000330949 LTBP2Q14767 1821 aa21.65■■□□□ 1.06
SOX1-201ENST00000330949 FIGNL2A6NMB9 653 aa21.65■■□□□ 1.06
SOX1-201ENST00000330949 PRH1P02810 166 aa21.65■■□□□ 1.06
SOX1-201ENST00000330949 ZNF101Q8IZC7 436 aa21.65■■□□□ 1.06
SOX1-201ENST00000330949 OR10AD1Q8NGE0 317 aa21.65■■□□□ 1.06
SOX1-201ENST00000330949 MFSD8Q8NHS3 518 aa21.65■■□□□ 1.06
SOX1-201ENST00000330949 RTBDNQ9BSG5 229 aaPredicted RBP21.65■■□□□ 1.06
SOX1-201ENST00000330949 SUCNR1Q9BXA5 334 aa21.65■■□□□ 1.06
SOX1-201ENST00000330949 NELFAQ9H3P2 528 aa21.65■■□□□ 1.06
SOX1-201ENST00000330949 WASF3Q9UPY6 502 aa21.65■■□□□ 1.06
SOX1-201ENST00000330949 ALPK2Q86TB3 2170 aa21.64■■□□□ 1.06
SOX1-201ENST00000330949 BORCS7-ASMTA0A0B4J1R7 106 aa21.64■■□□□ 1.05
SOX1-201ENST00000330949 DEDDO75618 318 aa21.64■■□□□ 1.05
SOX1-201ENST00000330949 BPNT1O95861 308 aa21.64■■□□□ 1.05
SOX1-201ENST00000330949 SPARCP09486 303 aa21.64■■□□□ 1.05
SOX1-201ENST00000330949 OR8G1Q15617 311 aa21.64■■□□□ 1.05
SOX1-201ENST00000330949 RD3Q7Z3Z2 195 aa21.64■■□□□ 1.05
SOX1-201ENST00000330949 AVL9Q8NBF6 648 aa21.64■■□□□ 1.05
SOX1-201ENST00000330949 WFIKKN2Q8TEU8 576 aa21.64■■□□□ 1.05
SOX1-201ENST00000330949 LMF2Q9BU23 707 aaKnown RBP21.64■■□□□ 1.05
SOX1-201ENST00000330949 OR11A1Q9GZK7 315 aa21.64■■□□□ 1.05
SOX1-201ENST00000330949 CLDN4O14493 209 aa21.64■■□□□ 1.05
SOX1-201ENST00000330949 CTSVO60911 334 aa21.64■■□□□ 1.05
SOX1-201ENST00000330949 COX5BP10606 129 aa21.64■■□□□ 1.05
SOX1-201ENST00000330949 BTG2P78543 158 aa21.64■■□□□ 1.05
SOX1-201ENST00000330949 IAH1Q2TAA2 248 aaPredicted RBP21.64■■□□□ 1.05
SOX1-201ENST00000330949 OR6X1Q8NH79 312 aa21.64■■□□□ 1.05
SOX1-201ENST00000330949 PLEKHA2Q9HB19 425 aa21.64■■□□□ 1.05
SOX1-201ENST00000330949 OR6A2O95222 327 aa21.63■■□□□ 1.05
SOX1-201ENST00000330949 PSRC1Q6PGN9 363 aaPredicted RBP21.63■■□□□ 1.05
SOX1-201ENST00000330949 TMEFF1Q8IYR6 380 aa21.63■■□□□ 1.05
SOX1-201ENST00000330949 SMOC1Q9H4F8 434 aa21.63■■□□□ 1.05
SOX1-201ENST00000330949 LOC107986453A0A1B0GWG9 222 aa21.63■■□□□ 1.05
SOX1-201ENST00000330949 SERINC4A6NH21 518 aa21.63■■□□□ 1.05
SOX1-201ENST00000330949 CXCL1P09341 107 aa21.63■■□□□ 1.05
SOX1-201ENST00000330949 DRD3P35462 400 aa21.63■■□□□ 1.05
SOX1-201ENST00000330949 NHLH2Q02577 135 aa21.63■■□□□ 1.05
SOX1-201ENST00000330949 AKR1C8PQ5T2L2 129 aa21.63■■□□□ 1.05
SOX1-201ENST00000330949 TMEM52Q8NDY8 209 aa21.63■■□□□ 1.05
SOX1-201ENST00000330949 TM4SF19Q96DZ7 209 aa21.63■■□□□ 1.05
SOX1-201ENST00000330949 PACRGQ96M98 296 aaPredicted RBP21.63■■□□□ 1.05
SOX1-201ENST00000330949 NOL4LQ96MY1 436 aaPredicted RBP21.63■■□□□ 1.05
SOX1-201ENST00000330949 RAMP1O60894 148 aa21.62■■□□□ 1.05
SOX1-201ENST00000330949 HPGDP15428 266 aa21.62■■□□□ 1.05
SOX1-201ENST00000330949 LMO1P25800 156 aa21.62■■□□□ 1.05
SOX1-201ENST00000330949 OTPQ5XKR4 325 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms