RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 OSGIN2Q9Y236 505 aa11.35□□□□□ -0.59
CCDC60-201ENST00000327554 SOX1O00570 391 aaPredicted RBP11.34□□□□□ -0.59
CCDC60-201ENST00000327554 PQBP1O60828 265 aaKnown RBP11.34□□□□□ -0.59
CCDC60-201ENST00000327554 MPZL1O95297 269 aa11.34□□□□□ -0.59
CCDC60-201ENST00000327554 F10P00742 488 aa11.34□□□□□ -0.59
CCDC60-201ENST00000327554 IFNA10P01566 189 aa11.34□□□□□ -0.59
CCDC60-201ENST00000327554 BGLAPP02818 100 aa11.34□□□□□ -0.59
CCDC60-201ENST00000327554 SEC11BP0C7V7 166 aa11.34□□□□□ -0.59
CCDC60-201ENST00000327554 EMP2P54851 167 aa11.34□□□□□ -0.59
CCDC60-201ENST00000327554 RAB38P57729 211 aa11.34□□□□□ -0.59
CCDC60-201ENST00000327554 SPCS3P61009 180 aa11.34□□□□□ -0.59
CCDC60-201ENST00000327554 PKIAP61925 76 aa11.34□□□□□ -0.59
CCDC60-201ENST00000327554 RSU1Q15404 277 aa11.34□□□□□ -0.59
CCDC60-201ENST00000327554 IAH1Q2TAA2 248 aaPredicted RBP11.34□□□□□ -0.59
CCDC60-201ENST00000327554 GFI1BQ5VTD9 330 aa11.34□□□□□ -0.59
CCDC60-201ENST00000327554 HIST3H2BBQ8N257 126 aa11.34□□□□□ -0.59
CCDC60-201ENST00000327554 SLC22A24Q8N4F4 322 aa11.34□□□□□ -0.59
CCDC60-201ENST00000327554 TMEM104Q8NE00 496 aa11.34□□□□□ -0.59
CCDC60-201ENST00000327554 VWCEQ96DN2 955 aa11.34□□□□□ -0.59
CCDC60-201ENST00000327554 PRRX2Q99811 253 aa11.34□□□□□ -0.59
CCDC60-201ENST00000327554 TWSG1Q9GZX9 223 aa11.34□□□□□ -0.59
CCDC60-201ENST00000327554 LPAR5Q9H1C0 372 aa11.34□□□□□ -0.59
CCDC60-201ENST00000327554 C19orf12Q9NSK7 152 aa11.34□□□□□ -0.59
CCDC60-201ENST00000327554 LUZP4Q9P127 313 aa11.34□□□□□ -0.59
CCDC60-201ENST00000327554 DEC1Q9P2X7 70 aa11.34□□□□□ -0.59
CCDC60-201ENST00000327554 FBLN5Q9UBX5 448 aa11.34□□□□□ -0.59
CCDC60-201ENST00000327554 TMEM131Q92545 1883 aa11.34□□□□□ -0.59
CCDC60-201ENST00000327554 TRBV23OR9-2A0A075B6M9 112 aa11.34□□□□□ -0.59
CCDC60-201ENST00000327554 A0A087X0M5 115 aa11.34□□□□□ -0.59
CCDC60-201ENST00000327554 A0A1B0GX30 115 aa11.34□□□□□ -0.59
CCDC60-201ENST00000327554 FIGNL2A6NMB9 653 aa11.34□□□□□ -0.59
CCDC60-201ENST00000327554 PRKNO60260 465 aaPredicted RBP11.34□□□□□ -0.59
CCDC60-201ENST00000327554 HIST1H2BKO60814 126 aa11.34□□□□□ -0.59
CCDC60-201ENST00000327554 RAMP1O60894 148 aa11.34□□□□□ -0.59
CCDC60-201ENST00000327554 RAD51DO75771 328 aa11.34□□□□□ -0.59
CCDC60-201ENST00000327554 HIST1H2BJP06899 126 aa11.34□□□□□ -0.59
CCDC60-201ENST00000327554 SOD3P08294 240 aa11.34□□□□□ -0.59
CCDC60-201ENST00000327554 CXCL1P09341 107 aa11.34□□□□□ -0.59
CCDC60-201ENST00000327554 PVRP15151 417 aa11.34□□□□□ -0.59
CCDC60-201ENST00000327554 PAX1P15863 534 aa11.34□□□□□ -0.59
CCDC60-201ENST00000327554 HIST1H2BOP23527 126 aa11.34□□□□□ -0.59
CCDC60-201ENST00000327554 HIST1H2BBP33778 126 aa11.34□□□□□ -0.59
CCDC60-201ENST00000327554 CAMLGP49069 296 aa11.34□□□□□ -0.59
CCDC60-201ENST00000327554 ZNF84P51523 738 aa11.34□□□□□ -0.59
CCDC60-201ENST00000327554 HIST1H2BDP58876 126 aa11.34□□□□□ -0.59
CCDC60-201ENST00000327554 HIST1H2BCP62807 126 aa11.34□□□□□ -0.59
CCDC60-201ENST00000327554 SLC35A1P78382 337 aa11.34□□□□□ -0.59
CCDC60-201ENST00000327554 DEFB103AP81534 67 aa11.34□□□□□ -0.59
CCDC60-201ENST00000327554 ACKR1Q16570 336 aa11.34□□□□□ -0.59
CCDC60-201ENST00000327554 HIST2H2BEQ16778 126 aa11.34□□□□□ -0.59
CCDC60-201ENST00000327554 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.34□□□□□ -0.59
CCDC60-201ENST00000327554 KHDC3LQ587J8 217 aa11.34□□□□□ -0.59
CCDC60-201ENST00000327554 FAM78AQ5JUQ0 283 aa11.34□□□□□ -0.59
CCDC60-201ENST00000327554 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.34□□□□□ -0.59
CCDC60-201ENST00000327554 CHRDL2Q6WN34 429 aa11.34□□□□□ -0.59
CCDC60-201ENST00000327554 COX15Q7KZN9 410 aa11.34□□□□□ -0.59
CCDC60-201ENST00000327554 NUP54Q7Z3B4 507 aa11.34□□□□□ -0.59
CCDC60-201ENST00000327554 RNF144BQ7Z419 303 aa11.34□□□□□ -0.59
CCDC60-201ENST00000327554 SEMA6DQ8NFY4 1073 aa11.34□□□□□ -0.59
CCDC60-201ENST00000327554 RHBDD1Q8TEB9 315 aa11.34□□□□□ -0.59
CCDC60-201ENST00000327554 METTL21AQ8WXB1 218 aa11.34□□□□□ -0.59
CCDC60-201ENST00000327554 HIST1H2BHQ93079 126 aa11.34□□□□□ -0.59
CCDC60-201ENST00000327554 RERGQ96A58 199 aaPredicted RBP11.34□□□□□ -0.59
CCDC60-201ENST00000327554 SCGB3A2Q96PL1 93 aa11.34□□□□□ -0.59
CCDC60-201ENST00000327554 HIST1H2BNQ99877 126 aa11.34□□□□□ -0.59
CCDC60-201ENST00000327554 HIST1H2BMQ99879 126 aa11.34□□□□□ -0.59
CCDC60-201ENST00000327554 GPR61Q9BZJ8 451 aa11.34□□□□□ -0.59
CCDC60-201ENST00000327554 FGF22Q9HCT0 170 aa11.34□□□□□ -0.59
CCDC60-201ENST00000327554 TMED3Q9Y3Q3 217 aa11.34□□□□□ -0.59
CCDC60-201ENST00000327554 PUS1Q9Y606 427 aaKnown RBP eCLIP11.34□□□□□ -0.59
CCDC60-201ENST00000327554 BTBD17A6NE02 478 aa11.33□□□□□ -0.6
CCDC60-201ENST00000327554 C1QL1O75973 258 aa11.33□□□□□ -0.6
CCDC60-201ENST00000327554 GSTP1P09211 210 aaKnown RBP11.33□□□□□ -0.6
CCDC60-201ENST00000327554 C5AR1P21730 350 aa11.33□□□□□ -0.6
CCDC60-201ENST00000327554 FCARP24071 287 aa11.33□□□□□ -0.6
CCDC60-201ENST00000327554 CHATP28329 748 aa11.33□□□□□ -0.6
CCDC60-201ENST00000327554 CRABP1P29762 137 aa11.33□□□□□ -0.6
CCDC60-201ENST00000327554 PTGER4P35408 488 aa11.33□□□□□ -0.6
CCDC60-201ENST00000327554 SSX2Q16385 188 aa11.33□□□□□ -0.6
CCDC60-201ENST00000327554 C14orf28Q4W4Y0 310 aa11.33□□□□□ -0.6
CCDC60-201ENST00000327554 CLEC9AQ6UXN8 241 aa11.33□□□□□ -0.6
CCDC60-201ENST00000327554 FAM160A2Q8N612 972 aaPredicted RBP11.33□□□□□ -0.6
CCDC60-201ENST00000327554 C16orf52Q8NHV5 167 aa11.33□□□□□ -0.6
CCDC60-201ENST00000327554 Q8WTZ3 238 aa11.33□□□□□ -0.6
CCDC60-201ENST00000327554 C2orf88Q9BSF0 95 aa11.33□□□□□ -0.6
CCDC60-201ENST00000327554 PRO1933Q9H354 126 aa11.33□□□□□ -0.6
CCDC60-201ENST00000327554 WFDC1Q9HC57 220 aa11.33□□□□□ -0.6
CCDC60-201ENST00000327554 STARD5Q9NSY2 213 aa11.33□□□□□ -0.6
CCDC60-201ENST00000327554 VSX1Q9NZR4 365 aaPredicted RBP11.33□□□□□ -0.6
CCDC60-201ENST00000327554 PHF3Q92576 2039 aaKnown RBP11.33□□□□□ -0.6
CCDC60-201ENST00000327554 ZNF726A6NNF4 738 aa11.33□□□□□ -0.6
CCDC60-201ENST00000327554 ZNF727A8MUV8 499 aa11.33□□□□□ -0.6
CCDC60-201ENST00000327554 SOCS1O15524 211 aa11.33□□□□□ -0.6
CCDC60-201ENST00000327554 IGFALSP35858 605 aa11.33□□□□□ -0.6
CCDC60-201ENST00000327554 GABRA4P48169 554 aa11.33□□□□□ -0.6
CCDC60-201ENST00000327554 SUCLG1P53597 346 aaKnown RBP11.33□□□□□ -0.6
CCDC60-201ENST00000327554 RPL27P61353 136 aaKnown RBP11.33□□□□□ -0.6
CCDC60-201ENST00000327554 ZNF674Q2M3X9 581 aa11.33□□□□□ -0.6
CCDC60-201ENST00000327554 ZNF343Q6P1L6 599 aa11.33□□□□□ -0.6
CCDC60-201ENST00000327554 ZNF529Q6P280 563 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms