RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 CFAP54Q96N23 3096 aa11.43□□□□□ -0.58
HMGCS1-201ENST00000325110 FAM230AA0A1W2PPH8 454 aa11.43□□□□□ -0.58
HMGCS1-201ENST00000325110 BPNT1O95861 308 aa11.43□□□□□ -0.58
HMGCS1-201ENST00000325110 ICAM2P13598 275 aa11.43□□□□□ -0.58
HMGCS1-201ENST00000325110 SWI5Q1ZZU3 235 aa11.43□□□□□ -0.58
HMGCS1-201ENST00000325110 BAP18Q8IXM2 172 aa11.43□□□□□ -0.58
HMGCS1-201ENST00000325110 C2CD4CQ8TF44 421 aa11.43□□□□□ -0.58
HMGCS1-201ENST00000325110 ALKBH4Q9NXW9 302 aa11.43□□□□□ -0.58
HMGCS1-201ENST00000325110 B3GALT5Q9Y2C3 310 aa11.43□□□□□ -0.58
HMGCS1-201ENST00000325110 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.42□□□□□ -0.58
HMGCS1-201ENST00000325110 LIPT2A6NK58 231 aa11.42□□□□□ -0.58
HMGCS1-201ENST00000325110 FTCDNL1E5RQL4 147 aa11.42□□□□□ -0.58
HMGCS1-201ENST00000325110 SLC33A1O00400 549 aaPredicted RBP11.42□□□□□ -0.58
HMGCS1-201ENST00000325110 EFSO43281 561 aa11.42□□□□□ -0.58
HMGCS1-201ENST00000325110 TIAF1O95411 115 aa11.42□□□□□ -0.58
HMGCS1-201ENST00000325110 CSTBP04080 98 aaKnown RBP11.42□□□□□ -0.58
HMGCS1-201ENST00000325110 CRHP06850 196 aa11.42□□□□□ -0.58
HMGCS1-201ENST00000325110 GP1BAP07359 652 aa11.42□□□□□ -0.58
HMGCS1-201ENST00000325110 SMCO1Q147U7 214 aa11.42□□□□□ -0.58
HMGCS1-201ENST00000325110 PLEKHN1Q494U1 663 aaPredicted RBP11.42□□□□□ -0.58
HMGCS1-201ENST00000325110 CLEC9AQ6UXN8 241 aa11.42□□□□□ -0.58
HMGCS1-201ENST00000325110 STOML3Q8TAV4 291 aa11.42□□□□□ -0.58
HMGCS1-201ENST00000325110 AQP3Q92482 292 aa11.42□□□□□ -0.58
HMGCS1-201ENST00000325110 ZNF285Q96NJ3 590 aa11.42□□□□□ -0.58
HMGCS1-201ENST00000325110 OR10A2Q9H208 303 aa11.42□□□□□ -0.58
HMGCS1-201ENST00000325110 PIGMQ9H3S5 423 aa11.42□□□□□ -0.58
HMGCS1-201ENST00000325110 FAM206AQ9NX38 181 aa11.42□□□□□ -0.58
HMGCS1-201ENST00000325110 RARRES3Q9UL19 164 aa11.42□□□□□ -0.58
HMGCS1-201ENST00000325110 A0A0A6YYH2 397 aa11.42□□□□□ -0.58
HMGCS1-201ENST00000325110 A0A1B0GTQ1 180 aa11.42□□□□□ -0.58
HMGCS1-201ENST00000325110 A6NJ64 397 aa11.42□□□□□ -0.58
HMGCS1-201ENST00000325110 CCDC85CA6NKD9 419 aa11.42□□□□□ -0.58
HMGCS1-201ENST00000325110 IL32P24001 234 aa11.42□□□□□ -0.58
HMGCS1-201ENST00000325110 OPRM1P35372 400 aa11.42□□□□□ -0.58
HMGCS1-201ENST00000325110 C1orf100Q5SVJ3 147 aa11.42□□□□□ -0.58
HMGCS1-201ENST00000325110 OR52H1Q8NGJ2 320 aa11.42□□□□□ -0.58
HMGCS1-201ENST00000325110 ZNF576Q9H609 170 aa11.42□□□□□ -0.58
HMGCS1-201ENST00000325110 PLEKHJ1Q9NW61 149 aa11.42□□□□□ -0.58
HMGCS1-201ENST00000325110 NCOR1O75376 2440 aa11.42□□□□□ -0.58
HMGCS1-201ENST00000325110 BCAT2O15382 392 aaPredicted RBP11.42□□□□□ -0.58
HMGCS1-201ENST00000325110 ANGPTL7O43827 346 aa11.42□□□□□ -0.58
HMGCS1-201ENST00000325110 MED6O75586 246 aa11.42□□□□□ -0.58
HMGCS1-201ENST00000325110 AKR1C3P42330 323 aa11.42□□□□□ -0.58
HMGCS1-201ENST00000325110 RAB32Q13637 225 aa11.42□□□□□ -0.58
HMGCS1-201ENST00000325110 RBM39Q14498 530 aaKnown RBP11.42□□□□□ -0.58
HMGCS1-201ENST00000325110 BRICD5Q6PL45 260 aa11.42□□□□□ -0.58
HMGCS1-201ENST00000325110 C5orf46Q6UWT4 87 aa11.42□□□□□ -0.58
HMGCS1-201ENST00000325110 CLRN3Q8NCR9 226 aa11.42□□□□□ -0.58
HMGCS1-201ENST00000325110 OR5L2Q8NGL0 311 aa11.42□□□□□ -0.58
HMGCS1-201ENST00000325110 WBP1Q96G27 269 aa11.42□□□□□ -0.58
HMGCS1-201ENST00000325110 CNTNAP3BQ96NU0 1288 aa11.42□□□□□ -0.58
HMGCS1-201ENST00000325110 ZNF850A8MQ14 1090 aa11.41□□□□□ -0.58
HMGCS1-201ENST00000325110 NPIPA2E9PIF3 369 aa11.41□□□□□ -0.58
HMGCS1-201ENST00000325110 NPIPA3F8WFD2 350 aa11.41□□□□□ -0.58
HMGCS1-201ENST00000325110 TPPPO94811 219 aa11.41□□□□□ -0.58
HMGCS1-201ENST00000325110 DUS4LO95620 317 aaKnown RBP11.41□□□□□ -0.58
HMGCS1-201ENST00000325110 HIST1H1DP16402 221 aaKnown RBP11.41□□□□□ -0.58
HMGCS1-201ENST00000325110 TAS2R31P59538 309 aa11.41□□□□□ -0.58
HMGCS1-201ENST00000325110 CLEC18BQ6UXF7 455 aa11.41□□□□□ -0.58
HMGCS1-201ENST00000325110 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.41□□□□□ -0.58
HMGCS1-201ENST00000325110 MISPQ8IVT2 679 aa11.41□□□□□ -0.58
HMGCS1-201ENST00000325110 SVBPQ8N300 66 aa11.41□□□□□ -0.58
HMGCS1-201ENST00000325110 TMEM156Q8N614 296 aa11.41□□□□□ -0.58
HMGCS1-201ENST00000325110 OR56B1Q8NGI3 324 aa11.41□□□□□ -0.58
HMGCS1-201ENST00000325110 LPAR5Q9H1C0 372 aa11.41□□□□□ -0.58
HMGCS1-201ENST00000325110 LHFPL6Q9Y693 200 aa11.41□□□□□ -0.58
HMGCS1-201ENST00000325110 WIPF3A6NGB9 483 aa11.41□□□□□ -0.58
HMGCS1-201ENST00000325110 MSGN1A6NI15 193 aa11.41□□□□□ -0.58
HMGCS1-201ENST00000325110 CDC14BO60729 498 aa11.41□□□□□ -0.58
HMGCS1-201ENST00000325110 CD74P04233 296 aa11.41□□□□□ -0.58
HMGCS1-201ENST00000325110 CSNK1A1P48729 337 aa11.41□□□□□ -0.58
HMGCS1-201ENST00000325110 CEBPGP53567 150 aa11.41□□□□□ -0.58
HMGCS1-201ENST00000325110 CYCSP99999 105 aaKnown RBP11.41□□□□□ -0.58
HMGCS1-201ENST00000325110 ZNF616Q08AN1 781 aa11.41□□□□□ -0.58
HMGCS1-201ENST00000325110 PDCD1Q15116 288 aa11.41□□□□□ -0.58
HMGCS1-201ENST00000325110 IAH1Q2TAA2 248 aaPredicted RBP11.41□□□□□ -0.58
HMGCS1-201ENST00000325110 TMEM128Q5BJH2 165 aa11.41□□□□□ -0.58
HMGCS1-201ENST00000325110 ANKRD37Q7Z713 158 aa11.41□□□□□ -0.58
HMGCS1-201ENST00000325110 C20orf196Q8IYI0 205 aa11.41□□□□□ -0.58
HMGCS1-201ENST00000325110 ZDHHC22Q8N966 263 aa11.41□□□□□ -0.58
HMGCS1-201ENST00000325110 EDAQ92838 391 aa11.41□□□□□ -0.58
HMGCS1-201ENST00000325110 OR5AC2Q9NZP5 309 aa11.41□□□□□ -0.58
HMGCS1-201ENST00000325110 ZNF319Q9P2F9 582 aa11.41□□□□□ -0.58
HMGCS1-201ENST00000325110 CYB5R1Q9UHQ9 305 aa11.41□□□□□ -0.58
HMGCS1-201ENST00000325110 SRPK3Q9UPE1 567 aa11.41□□□□□ -0.58
HMGCS1-201ENST00000325110 VPS13AQ96RL7 3174 aa11.41□□□□□ -0.58
HMGCS1-201ENST00000325110 A0A1W2PR77 199 aa11.4□□□□□ -0.58
HMGCS1-201ENST00000325110 OR6C76A6NM76 312 aa11.4□□□□□ -0.58
HMGCS1-201ENST00000325110 ZFAND5O76080 213 aa11.4□□□□□ -0.58
HMGCS1-201ENST00000325110 CHRM2P08172 466 aa11.4□□□□□ -0.58
HMGCS1-201ENST00000325110 GLB1P16278 677 aa11.4□□□□□ -0.58
HMGCS1-201ENST00000325110 NAT1P18440 290 aa11.4□□□□□ -0.58
HMGCS1-201ENST00000325110 NXPH1P58417 271 aa11.4□□□□□ -0.58
HMGCS1-201ENST00000325110 THEM4Q5T1C6 240 aa11.4□□□□□ -0.58
HMGCS1-201ENST00000325110 NOXO1Q8NFA2 376 aa11.4□□□□□ -0.58
HMGCS1-201ENST00000325110 OR10S1Q8NGN2 331 aa11.4□□□□□ -0.58
HMGCS1-201ENST00000325110 RNF141Q8WVD5 230 aa11.4□□□□□ -0.58
HMGCS1-201ENST00000325110 ZNF501Q96CX3 271 aaPredicted RBP11.4□□□□□ -0.58
HMGCS1-201ENST00000325110 DNTTIP1Q9H147 329 aa11.4□□□□□ -0.58
HMGCS1-201ENST00000325110 ZNF629Q9UEG4 869 aaPredicted RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms