RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 PLRG1O43660 514 aaKnown RBP6.4□□□□□ -1.38
SMC1A-201ENST00000322213 GPANK1O95872 356 aa6.4□□□□□ -1.38
SMC1A-201ENST00000322213 CD82P27701 267 aa6.4□□□□□ -1.38
SMC1A-201ENST00000322213 PXNP49023 591 aaPredicted RBP6.4□□□□□ -1.38
SMC1A-201ENST00000322213 GLIPR1L1Q6UWM5 242 aa6.4□□□□□ -1.38
SMC1A-201ENST00000322213 IL1F10Q8WWZ1 152 aa6.4□□□□□ -1.38
SMC1A-201ENST00000322213 ISOC2Q96AB3 205 aa6.4□□□□□ -1.38
SMC1A-201ENST00000322213 ELOVL1Q9BW60 279 aa6.4□□□□□ -1.38
SMC1A-201ENST00000322213 ADGRL4Q9HBW9 690 aa6.4□□□□□ -1.38
SMC1A-201ENST00000322213 IL17BQ9UHF5 180 aa6.4□□□□□ -1.38
SMC1A-201ENST00000322213 CXCL2P19875 107 aa6.4□□□□□ -1.39
SMC1A-201ENST00000322213 NTF3P20783 257 aa6.4□□□□□ -1.39
SMC1A-201ENST00000322213 DIO1P49895 249 aa6.4□□□□□ -1.39
SMC1A-201ENST00000322213 INSL4Q14641 139 aa6.4□□□□□ -1.39
SMC1A-201ENST00000322213 CYB5R2Q6BCY4 276 aa6.4□□□□□ -1.39
SMC1A-201ENST00000322213 NUDT9Q9BW91 350 aa6.4□□□□□ -1.39
SMC1A-201ENST00000322213 BCL2L10Q9HD36 194 aa6.4□□□□□ -1.39
SMC1A-201ENST00000322213 CGGBP1Q9UFW8 167 aaPredicted RBP6.4□□□□□ -1.39
SMC1A-201ENST00000322213 SERTAD3Q9UJW9 196 aa6.4□□□□□ -1.39
SMC1A-201ENST00000322213 A4GNTQ9UNA3 340 aa6.4□□□□□ -1.39
SMC1A-201ENST00000322213 AMDHD2Q9Y303 409 aa6.4□□□□□ -1.39
SMC1A-201ENST00000322213 ARL2-SNX15V9GYD0 113 aa6.4□□□□□ -1.39
SMC1A-201ENST00000322213 NOTCH4Q99466 2003 aa6.4□□□□□ -1.39
SMC1A-201ENST00000322213 NPIPA5A0A0B4J1W7 369 aa6.4□□□□□ -1.39
SMC1A-201ENST00000322213 ZNF320A2RRD8 509 aa6.4□□□□□ -1.39
SMC1A-201ENST00000322213 SERPINE3A8MV23 424 aa6.4□□□□□ -1.39
SMC1A-201ENST00000322213 A8MVM7 634 aa6.4□□□□□ -1.39
SMC1A-201ENST00000322213 SMAD6O43541 496 aaKnown RBP6.4□□□□□ -1.39
SMC1A-201ENST00000322213 KLK3P07288 261 aaPredicted RBP6.4□□□□□ -1.39
SMC1A-201ENST00000322213 FBLP22087 321 aaKnown RBP6.4□□□□□ -1.39
SMC1A-201ENST00000322213 MSRB3Q8IXL7 192 aa6.4□□□□□ -1.39
SMC1A-201ENST00000322213 SLC35A4Q96G79 324 aa6.4□□□□□ -1.39
SMC1A-201ENST00000322213 ZNF845Q96IR2 970 aaPredicted RBP6.4□□□□□ -1.39
SMC1A-201ENST00000322213 OR5B2Q96R09 309 aa6.4□□□□□ -1.39
SMC1A-201ENST00000322213 A0A1B0GWA3 101 aa6.4□□□□□ -1.39
SMC1A-201ENST00000322213 PRSS58Q8IYP2 241 aa6.4□□□□□ -1.39
SMC1A-201ENST00000322213 ZNF611Q8N823 705 aa6.4□□□□□ -1.39
SMC1A-201ENST00000322213 OR52R1Q8NGF1 315 aa6.4□□□□□ -1.39
SMC1A-201ENST00000322213 NXPE3Q969Y0 559 aa6.4□□□□□ -1.39
SMC1A-201ENST00000322213 YIF1AO95070 293 aa6.4□□□□□ -1.39
SMC1A-201ENST00000322213 MBPP02686 304 aaPredicted RBP6.4□□□□□ -1.39
SMC1A-201ENST00000322213 CD70P32970 193 aa6.4□□□□□ -1.39
SMC1A-201ENST00000322213 HMGA2P52926 109 aa6.4□□□□□ -1.39
SMC1A-201ENST00000322213 HFEQ30201 348 aa6.4□□□□□ -1.39
SMC1A-201ENST00000322213 SLC48A1Q6P1K1 146 aa6.4□□□□□ -1.39
SMC1A-201ENST00000322213 MOB3CQ70IA8 216 aa6.4□□□□□ -1.39
SMC1A-201ENST00000322213 ZNF321PQ8N8H1 164 aa6.4□□□□□ -1.39
SMC1A-201ENST00000322213 ORAI1Q96D31 301 aa6.4□□□□□ -1.39
SMC1A-201ENST00000322213 KCNJ15Q99712 375 aa6.4□□□□□ -1.39
SMC1A-201ENST00000322213 LHX6Q9UPM6 363 aa6.4□□□□□ -1.39
SMC1A-201ENST00000322213 SLCO1B1Q9Y6L6 691 aa6.4□□□□□ -1.39
SMC1A-201ENST00000322213 SERTM1A2A2V5 107 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 SLC17A2O00624 439 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 ARG1P05089 322 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 FCGR2AP12318 317 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 ABOP16442 354 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 PRR18Q8N4B5 295 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 LMX1AQ8TE12 382 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 SEH1LQ96EE3 360 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 ZNF2Q9BSG1 426 aaPredicted RBP6.39□□□□□ -1.39
SMC1A-201ENST00000322213 SMG9Q9H0W8 520 aaKnown RBP6.39□□□□□ -1.39
SMC1A-201ENST00000322213 GFYI3L273 518 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 SULT2B1O00204 365 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 AQP7O14520 342 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 IGHA1P01876 353 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 RAB38P57729 211 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 CEBPEQ15744 281 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 RGS7BPQ6MZT1 257 aaPredicted RBP6.39□□□□□ -1.39
SMC1A-201ENST00000322213 OR5L2Q8NGL0 311 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 PIK3IP1Q96FE7 263 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 REEP6Q96HR9 211 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 SLC5A6Q9Y289 635 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 SOCS7O14512 581 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 SIAH2O43255 324 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 TRAPPC6AO75865 159 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 ACKR3P25106 362 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 JAG1P78504 1218 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 POU3F1Q03052 451 aaPredicted RBP6.39□□□□□ -1.39
SMC1A-201ENST00000322213 SLC25A42Q86VD7 318 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 LDLRAD3Q86YD5 345 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 SLC38A9Q8NBW4 561 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 SFXN1Q9H9B4 322 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 NEU3Q9UQ49 428 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 H7C1C5 153 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 CRYABP02511 175 aaKnown RBP6.39□□□□□ -1.39
SMC1A-201ENST00000322213 GP1BAP07359 652 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 LAMTOR1Q6IAA8 161 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 M1APQ8TC57 530 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 MRPL38Q96DV4 380 aaKnown RBP6.39□□□□□ -1.39
SMC1A-201ENST00000322213 PEX11GQ96HA9 241 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 RTP3Q9BQQ7 232 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 TMEM106CQ9BVX2 250 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 FIGNL2A6NMB9 653 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 B4DGG1 531 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 ADAP1O75689 374 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 FASLGP48023 281 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 STUMQ69YW2 141 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 MFSD12Q6NUT3 480 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 GKN2Q86XP6 184 aa6.39□□□□□ -1.39
SMC1A-201ENST00000322213 METTL27Q8N6F8 245 aaPredicted RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms