RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 PTP4A3O75365 173 aa13.69□□□□□ -0.22
VARS2-201ENST00000321897 SCAF4O95104 1147 aaKnown RBP13.69□□□□□ -0.22
VARS2-201ENST00000321897 HLA-DOBP13765 273 aa13.69□□□□□ -0.22
VARS2-201ENST00000321897 PPIAP62937 165 aaKnown RBP13.69□□□□□ -0.22
VARS2-201ENST00000321897 INPP5JQ15735 1006 aaPredicted RBP13.69□□□□□ -0.22
VARS2-201ENST00000321897 RNF212Q495C1 297 aa13.69□□□□□ -0.22
VARS2-201ENST00000321897 RBMS3Q6XE24 437 aaKnown RBP13.69□□□□□ -0.22
VARS2-201ENST00000321897 LINC00696Q6ZRV3 163 aa13.69□□□□□ -0.22
VARS2-201ENST00000321897 OR6S1Q8NH40 331 aa13.69□□□□□ -0.22
VARS2-201ENST00000321897 VSTM2LQ96N03 204 aa13.69□□□□□ -0.22
VARS2-201ENST00000321897 OCSTAMPQ9BR26 566 aa13.69□□□□□ -0.22
VARS2-201ENST00000321897 HMSDA8MTL9 139 aa13.69□□□□□ -0.22
VARS2-201ENST00000321897 OR7C1O76099 320 aaPredicted RBP13.69□□□□□ -0.22
VARS2-201ENST00000321897 DIRAS3O95661 229 aa13.69□□□□□ -0.22
VARS2-201ENST00000321897 ITGB2P05107 769 aa13.69□□□□□ -0.22
VARS2-201ENST00000321897 ZNF561Q8N587 486 aa13.69□□□□□ -0.22
VARS2-201ENST00000321897 GNRHR2Q96P88 292 aa13.69□□□□□ -0.22
VARS2-201ENST00000321897 JAM3Q9BX67 310 aa13.69□□□□□ -0.22
VARS2-201ENST00000321897 TMEM59Q9BXS4 323 aa13.69□□□□□ -0.22
VARS2-201ENST00000321897 TLNRD1Q9H1K6 362 aa13.69□□□□□ -0.22
VARS2-201ENST00000321897 PILRAQ9UKJ1 303 aa13.69□□□□□ -0.22
VARS2-201ENST00000321897 SRPK3Q9UPE1 567 aa13.69□□□□□ -0.22
VARS2-201ENST00000321897 MRPS28Q9Y2Q9 187 aaKnown RBP13.69□□□□□ -0.22
VARS2-201ENST00000321897 NSG1A0A0A6YYJ2 146 aa13.69□□□□□ -0.22
VARS2-201ENST00000321897 FOXS1O43638 330 aa13.69□□□□□ -0.22
VARS2-201ENST00000321897 HLA-DQB1P01920 261 aa13.69□□□□□ -0.22
VARS2-201ENST00000321897 OPRM1P35372 400 aa13.69□□□□□ -0.22
VARS2-201ENST00000321897 ACSM1Q08AH1 577 aa13.69□□□□□ -0.22
VARS2-201ENST00000321897 RIN1Q13671 783 aa13.69□□□□□ -0.22
VARS2-201ENST00000321897 H1FNTQ75WM6 255 aaPredicted RBP13.69□□□□□ -0.22
VARS2-201ENST00000321897 ADGRE4PQ86SQ3 457 aa13.69□□□□□ -0.22
VARS2-201ENST00000321897 LDLRAD3Q86YD5 345 aa13.69□□□□□ -0.22
VARS2-201ENST00000321897 AKR7LQ8NHP1 331 aa13.69□□□□□ -0.22
VARS2-201ENST00000321897 GPBAR1Q8TDU6 330 aa13.69□□□□□ -0.22
VARS2-201ENST00000321897 TSPAN32Q96QS1 320 aa13.69□□□□□ -0.22
VARS2-201ENST00000321897 UQCC1Q9NVA1 299 aa13.69□□□□□ -0.22
VARS2-201ENST00000321897 KLHDC2Q9Y2U9 406 aa13.69□□□□□ -0.22
VARS2-201ENST00000321897 SIT1Q9Y3P8 196 aa13.69□□□□□ -0.22
VARS2-201ENST00000321897 CXorf51AA0A1B0GTR3 108 aa13.68□□□□□ -0.22
VARS2-201ENST00000321897 ADAM11O75078 769 aa13.68□□□□□ -0.22
VARS2-201ENST00000321897 CNOT4O95628 575 aaKnown RBP13.68□□□□□ -0.22
VARS2-201ENST00000321897 CD53P19397 219 aa13.68□□□□□ -0.22
VARS2-201ENST00000321897 TOLLIPQ9H0E2 274 aa13.68□□□□□ -0.22
VARS2-201ENST00000321897 MEX3AA1L020 520 aaKnown RBP13.68□□□□□ -0.22
VARS2-201ENST00000321897 QDPRP09417 244 aa13.68□□□□□ -0.22
VARS2-201ENST00000321897 NPEPL1Q8NDH3 523 aa13.68□□□□□ -0.22
VARS2-201ENST00000321897 OR6K3Q8NGY3 331 aa13.68□□□□□ -0.22
VARS2-201ENST00000321897 IL1F10Q8WWZ1 152 aa13.68□□□□□ -0.22
VARS2-201ENST00000321897 PHYHIPQ92561 330 aa13.68□□□□□ -0.22
VARS2-201ENST00000321897 SHARPINQ9H0F6 387 aa13.68□□□□□ -0.22
VARS2-201ENST00000321897 MRM2Q9UI43 246 aaKnown RBP13.68□□□□□ -0.22
VARS2-201ENST00000321897 AMDHD2Q9Y303 409 aa13.68□□□□□ -0.22
VARS2-201ENST00000321897 A6NIZ1 184 aa13.68□□□□□ -0.22
VARS2-201ENST00000321897 MASP2O00187 686 aa13.68□□□□□ -0.22
VARS2-201ENST00000321897 IFNA2P01563 188 aa13.68□□□□□ -0.22
VARS2-201ENST00000321897 CD63P08962 238 aa13.68□□□□□ -0.22
VARS2-201ENST00000321897 RAP1BP61224 184 aa13.68□□□□□ -0.22
VARS2-201ENST00000321897 RAP1AP62834 184 aa13.68□□□□□ -0.22
VARS2-201ENST00000321897 C2orf68Q2NKX9 166 aa13.68□□□□□ -0.22
VARS2-201ENST00000321897 PHLDA2Q53GA4 152 aa13.68□□□□□ -0.22
VARS2-201ENST00000321897 TMEM104Q8NE00 496 aa13.68□□□□□ -0.22
VARS2-201ENST00000321897 SLAMF6Q96DU3 332 aa13.68□□□□□ -0.22
VARS2-201ENST00000321897 GABRG3Q99928 467 aa13.68□□□□□ -0.22
VARS2-201ENST00000321897 MED9Q9NWA0 146 aa13.68□□□□□ -0.22
VARS2-201ENST00000321897 PKDREJQ9NTG1 2253 aa13.68□□□□□ -0.22
VARS2-201ENST00000321897 GDF1P27539 372 aa13.67□□□□□ -0.22
VARS2-201ENST00000321897 ACAA2P42765 397 aaKnown RBP13.67□□□□□ -0.22
VARS2-201ENST00000321897 MTCP1P56278 107 aa13.67□□□□□ -0.22
VARS2-201ENST00000321897 TLE1Q04724 770 aa13.67□□□□□ -0.22
VARS2-201ENST00000321897 PJVKQ0ZLH3 352 aa13.67□□□□□ -0.22
VARS2-201ENST00000321897 SLC17A1Q14916 467 aa13.67□□□□□ -0.22
VARS2-201ENST00000321897 GUSBP11Q6P575 273 aa13.67□□□□□ -0.22
VARS2-201ENST00000321897 BRICD5Q6PL45 260 aa13.67□□□□□ -0.22
VARS2-201ENST00000321897 CD200R1LQ6Q8B3 271 aa13.67□□□□□ -0.22
VARS2-201ENST00000321897 TMEM182Q6ZP80 229 aaPredicted RBP13.67□□□□□ -0.22
VARS2-201ENST00000321897 MRPL41Q8IXM3 137 aaKnown RBP13.67□□□□□ -0.22
VARS2-201ENST00000321897 MARVELD3Q96A59 401 aa13.67□□□□□ -0.22
VARS2-201ENST00000321897 BORCS8Q96FH0 119 aa13.67□□□□□ -0.22
VARS2-201ENST00000321897 SGCZQ96LD1 299 aa13.67□□□□□ -0.22
VARS2-201ENST00000321897 GP1BAP07359 652 aa13.67□□□□□ -0.22
VARS2-201ENST00000321897 PATE4P0C8F1 98 aa13.67□□□□□ -0.22
VARS2-201ENST00000321897 S100GP29377 79 aa13.67□□□□□ -0.22
VARS2-201ENST00000321897 FCGR2CP31995 323 aa13.67□□□□□ -0.22
VARS2-201ENST00000321897 ELFN2Q5R3F8 820 aa13.67□□□□□ -0.22
VARS2-201ENST00000321897 TMEM164Q5U3C3 297 aa13.67□□□□□ -0.22
VARS2-201ENST00000321897 OR10G3Q8NGC4 313 aa13.67□□□□□ -0.22
VARS2-201ENST00000321897 MITD1Q8WV92 249 aa13.67□□□□□ -0.22
VARS2-201ENST00000321897 CLCC1Q96S66 551 aa13.67□□□□□ -0.22
VARS2-201ENST00000321897 AMELYQ99218 206 aa13.67□□□□□ -0.22
VARS2-201ENST00000321897 GPR84Q9NQS5 396 aa13.67□□□□□ -0.22
VARS2-201ENST00000321897 LRP12Q9Y561 859 aa13.67□□□□□ -0.22
VARS2-201ENST00000321897 KPTNQ9Y664 436 aa13.67□□□□□ -0.22
VARS2-201ENST00000321897 IGHV4-34P06331 123 aa13.67□□□□□ -0.22
VARS2-201ENST00000321897 BCKDHBP21953 392 aa13.67□□□□□ -0.22
VARS2-201ENST00000321897 IKZF1Q13422 519 aa13.67□□□□□ -0.22
VARS2-201ENST00000321897 FRRS1LQ9P0K9 344 aa13.67□□□□□ -0.22
VARS2-201ENST00000321897 SCN8AQ9UQD0 1980 aa13.66□□□□□ -0.22
VARS2-201ENST00000321897 CTAG2O75638 210 aa13.66□□□□□ -0.22
VARS2-201ENST00000321897 CPN1P15169 458 aa13.66□□□□□ -0.22
VARS2-201ENST00000321897 RNF4P78317 190 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms