RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 MARS2Q96GW9 593 aaKnown RBP13.22□□□□□ -0.29
PDLIM5-202ENST00000318007 BCL2L14Q9BZR8 327 aa13.22□□□□□ -0.29
PDLIM5-202ENST00000318007 SP140LQ9H930 580 aa13.22□□□□□ -0.29
PDLIM5-202ENST00000318007 TAS2R4Q9NYW5 299 aa13.22□□□□□ -0.29
PDLIM5-202ENST00000318007 SSR3Q9UNL2 185 aa13.22□□□□□ -0.29
PDLIM5-202ENST00000318007 RNF115Q9Y4L5 304 aa13.22□□□□□ -0.29
PDLIM5-202ENST00000318007 SPEF1Q9Y4P9 236 aa13.22□□□□□ -0.29
PDLIM5-202ENST00000318007 CEPT1Q9Y6K0 416 aa13.22□□□□□ -0.29
PDLIM5-202ENST00000318007 DOPEY2Q9Y3R5 2298 aa13.22□□□□□ -0.29
PDLIM5-202ENST00000318007 VPS13CQ709C8 3753 aa13.22□□□□□ -0.29
PDLIM5-202ENST00000318007 MAS1P04201 325 aa13.21□□□□□ -0.29
PDLIM5-202ENST00000318007 ZNF20P17024 532 aa13.21□□□□□ -0.29
PDLIM5-202ENST00000318007 GCH1P30793 250 aa13.21□□□□□ -0.29
PDLIM5-202ENST00000318007 RBMXP38159 391 aaKnown RBP13.21□□□□□ -0.29
PDLIM5-202ENST00000318007 GPR50Q13585 617 aa13.21□□□□□ -0.29
PDLIM5-202ENST00000318007 HIST2H2BCQ6DN03 193 aa13.21□□□□□ -0.29
PDLIM5-202ENST00000318007 MS4A15Q8N5U1 240 aa13.21□□□□□ -0.29
PDLIM5-202ENST00000318007 SEMA6DQ8NFY4 1073 aa13.21□□□□□ -0.29
PDLIM5-202ENST00000318007 OR13C9Q8NGT0 318 aa13.21□□□□□ -0.29
PDLIM5-202ENST00000318007 OR14K1Q8NGZ2 314 aa13.21□□□□□ -0.29
PDLIM5-202ENST00000318007 TMEM171Q8WVE6 324 aa13.21□□□□□ -0.29
PDLIM5-202ENST00000318007 AKAP1Q92667 903 aaKnown RBP eCLIP13.21□□□□□ -0.29
PDLIM5-202ENST00000318007 ISOC1Q96CN7 298 aa13.21□□□□□ -0.29
PDLIM5-202ENST00000318007 PAPOLGQ9BWT3 736 aaKnown RBP13.21□□□□□ -0.29
PDLIM5-202ENST00000318007 TPK1Q9H3S4 243 aa13.21□□□□□ -0.29
PDLIM5-202ENST00000318007 ENPP5Q9UJA9 477 aa13.21□□□□□ -0.29
PDLIM5-202ENST00000318007 RHBDD3Q9Y3P4 386 aa13.21□□□□□ -0.29
PDLIM5-202ENST00000318007 FASNP49327 2511 aaKnown RBP13.21□□□□□ -0.29
PDLIM5-202ENST00000318007 TRAV8-7A0A075B6U6 113 aa13.21□□□□□ -0.29
PDLIM5-202ENST00000318007 PIN1P1O15428 100 aa13.21□□□□□ -0.29
PDLIM5-202ENST00000318007 TIMM8AO60220 97 aaPredicted RBP13.21□□□□□ -0.29
PDLIM5-202ENST00000318007 NKX6-1P78426 367 aaPredicted RBP13.21□□□□□ -0.29
PDLIM5-202ENST00000318007 DNAAF1Q8NEP3 725 aa13.21□□□□□ -0.29
PDLIM5-202ENST00000318007 OR51A2Q8NGJ7 313 aa13.21□□□□□ -0.29
PDLIM5-202ENST00000318007 NDNFQ8TB73 568 aa13.21□□□□□ -0.29
PDLIM5-202ENST00000318007 PIGCQ92535 297 aa13.21□□□□□ -0.29
PDLIM5-202ENST00000318007 GTF3AQ92664 365 aaKnown RBP13.21□□□□□ -0.29
PDLIM5-202ENST00000318007 DERL3Q96Q80 235 aa13.21□□□□□ -0.29
PDLIM5-202ENST00000318007 SPACA5Q96QH8 159 aa13.21□□□□□ -0.29
PDLIM5-202ENST00000318007 REPIN1Q9BWE0 567 aaKnown RBP13.21□□□□□ -0.29
PDLIM5-202ENST00000318007 MRPL37Q9BZE1 423 aaKnown RBP13.21□□□□□ -0.29
PDLIM5-202ENST00000318007 MSL2Q9HCI7 577 aa13.21□□□□□ -0.29
PDLIM5-202ENST00000318007 GPR173Q9NS66 373 aa13.21□□□□□ -0.29
PDLIM5-202ENST00000318007 ZNF275Q9NSD4 429 aaPredicted RBP13.21□□□□□ -0.29
PDLIM5-202ENST00000318007 GPR160Q9UJ42 338 aa13.21□□□□□ -0.29
PDLIM5-202ENST00000318007 CSMD1Q96PZ7 3565 aa13.2□□□□□ -0.3
PDLIM5-202ENST00000318007 A0A1W2PPR1 153 aa13.2□□□□□ -0.3
PDLIM5-202ENST00000318007 SHISA3A0PJX4 238 aa13.2□□□□□ -0.3
PDLIM5-202ENST00000318007 E7EQL1 145 aa13.2□□□□□ -0.3
PDLIM5-202ENST00000318007 MTRF1O75570 445 aaKnown RBP13.2□□□□□ -0.3
PDLIM5-202ENST00000318007 NCR1O76036 304 aa13.2□□□□□ -0.3
PDLIM5-202ENST00000318007 IGLV3-1P01715 115 aa13.2□□□□□ -0.3
PDLIM5-202ENST00000318007 CAV3P56539 151 aa13.2□□□□□ -0.3
PDLIM5-202ENST00000318007 HNRNPA0Q13151 305 aaKnown RBP13.2□□□□□ -0.3
PDLIM5-202ENST00000318007 CTF1Q16619 201 aa13.2□□□□□ -0.3
PDLIM5-202ENST00000318007 C3orf36Q3SXR2 165 aa13.2□□□□□ -0.3
PDLIM5-202ENST00000318007 ASPHD2Q6ICH7 369 aa13.2□□□□□ -0.3
PDLIM5-202ENST00000318007 EGFL6Q8IUX8 553 aa13.2□□□□□ -0.3
PDLIM5-202ENST00000318007 OR10AD1Q8NGE0 317 aa13.2□□□□□ -0.3
PDLIM5-202ENST00000318007 TRMT10AQ8TBZ6 339 aaKnown RBP13.2□□□□□ -0.3
PDLIM5-202ENST00000318007 KLF2Q9Y5W3 355 aaPredicted RBP13.2□□□□□ -0.3
PDLIM5-202ENST00000318007 TRBV5-5A0A0J9YX44 114 aa13.2□□□□□ -0.3
PDLIM5-202ENST00000318007 A0A1W2PPW3 197 aa13.2□□□□□ -0.3
PDLIM5-202ENST00000318007 CD300LBA8K4G0 201 aa13.2□□□□□ -0.3
PDLIM5-202ENST00000318007 ZNF850A8MQ14 1090 aa13.2□□□□□ -0.3
PDLIM5-202ENST00000318007 NOL3O60936 208 aaKnown RBP13.2□□□□□ -0.3
PDLIM5-202ENST00000318007 SC5DO75845 299 aa13.2□□□□□ -0.3
PDLIM5-202ENST00000318007 SERPINA3P01011 423 aa13.2□□□□□ -0.3
PDLIM5-202ENST00000318007 CD2P06729 351 aa13.2□□□□□ -0.3
PDLIM5-202ENST00000318007 OR4A8P0C604 315 aa13.2□□□□□ -0.3
PDLIM5-202ENST00000318007 OCMP0CE72 109 aaPredicted RBP13.2□□□□□ -0.3
PDLIM5-202ENST00000318007 CA6P23280 308 aa13.2□□□□□ -0.3
PDLIM5-202ENST00000318007 ZNF718Q3SXZ3 478 aa13.2□□□□□ -0.3
PDLIM5-202ENST00000318007 UNQ6126/PRO20091Q6UXV3 157 aa13.2□□□□□ -0.3
PDLIM5-202ENST00000318007 ANKRD13BQ86YJ7 626 aa13.2□□□□□ -0.3
PDLIM5-202ENST00000318007 ZCCHC24Q8N2G6 241 aaKnown RBP13.2□□□□□ -0.3
PDLIM5-202ENST00000318007 SYNPRQ8TBG9 265 aa13.2□□□□□ -0.3
PDLIM5-202ENST00000318007 SPSB4Q96A44 273 aa13.2□□□□□ -0.3
PDLIM5-202ENST00000318007 CISD1Q9NZ45 108 aaKnown RBP13.2□□□□□ -0.3
PDLIM5-202ENST00000318007 FBN2P35556 2912 aa13.19□□□□□ -0.3
PDLIM5-202ENST00000318007 GABARAPO95166 117 aa13.19□□□□□ -0.3
PDLIM5-202ENST00000318007 SELEP16581 610 aa13.19□□□□□ -0.3
PDLIM5-202ENST00000318007 CCL1P22362 96 aa13.19□□□□□ -0.3
PDLIM5-202ENST00000318007 GLRXP35754 106 aa13.19□□□□□ -0.3
PDLIM5-202ENST00000318007 ALDH3B1P43353 468 aa13.19□□□□□ -0.3
PDLIM5-202ENST00000318007 MAP2K3P46734 347 aa13.19□□□□□ -0.3
PDLIM5-202ENST00000318007 HSD17B12Q53GQ0 312 aa13.19□□□□□ -0.3
PDLIM5-202ENST00000318007 SP5Q6BEB4 398 aaPredicted RBP13.19□□□□□ -0.3
PDLIM5-202ENST00000318007 SSX8Q7RTT4 187 aa13.19□□□□□ -0.3
PDLIM5-202ENST00000318007 PLPP7Q8NBV4 271 aa13.19□□□□□ -0.3
PDLIM5-202ENST00000318007 LILRB1Q8NHL6 650 aaPredicted RBP13.19□□□□□ -0.3
PDLIM5-202ENST00000318007 C12orf43Q96C57 262 aaKnown RBP13.19□□□□□ -0.3
PDLIM5-202ENST00000318007 DCUN1D5Q9BTE7 237 aa13.19□□□□□ -0.3
PDLIM5-202ENST00000318007 RBM38Q9H0Z9 239 aaKnown RBP13.19□□□□□ -0.3
PDLIM5-202ENST00000318007 RGCCQ9H4X1 137 aa13.19□□□□□ -0.3
PDLIM5-202ENST00000318007 V9GYS6 101 aa13.19□□□□□ -0.3
PDLIM5-202ENST00000318007 TRDV1A0A1B0GX56 115 aa13.18□□□□□ -0.3
PDLIM5-202ENST00000318007 H3BMQ9 156 aa13.18□□□□□ -0.3
PDLIM5-202ENST00000318007 ICMTO60725 284 aa13.18□□□□□ -0.3
PDLIM5-202ENST00000318007 CLEC2LP0C7M8 214 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms