RNA–Protein interactions for RNA: ENST00000316308.8

CLK4-201, Transcript of CDC like kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK4, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-201ENST00000316308 C12orf45Q8N5I9 185 aaPredicted RBP12.96□□□□□ -0.33
CLK4-201ENST00000316308 STEAP2Q8NFT2 490 aa12.96□□□□□ -0.33
CLK4-201ENST00000316308 M1APQ8TC57 530 aa12.96□□□□□ -0.33
CLK4-201ENST00000316308 CXorf58Q96LI9 332 aa12.96□□□□□ -0.33
CLK4-201ENST00000316308 EDEM2Q9BV94 578 aa12.96□□□□□ -0.33
CLK4-201ENST00000316308 ARL6Q9H0F7 186 aa12.96□□□□□ -0.33
CLK4-201ENST00000316308 SCPEP1Q9HB40 452 aa12.96□□□□□ -0.33
CLK4-201ENST00000316308 PISDQ9UG56 409 aa12.96□□□□□ -0.33
CLK4-201ENST00000316308 UBQLN2Q9UHD9 624 aa12.96□□□□□ -0.33
CLK4-201ENST00000316308 CDC14BO60729 498 aa12.96□□□□□ -0.34
CLK4-201ENST00000316308 CRTAPO75718 401 aaPredicted RBP12.96□□□□□ -0.34
CLK4-201ENST00000316308 IGHV3-9P01782 118 aa12.96□□□□□ -0.34
CLK4-201ENST00000316308 EXT1Q16394 746 aa12.96□□□□□ -0.34
CLK4-201ENST00000316308 ZNF239Q16600 458 aaKnown RBP12.96□□□□□ -0.34
CLK4-201ENST00000316308 RNASE10Q5GAN6 216 aaKnown RBP12.96□□□□□ -0.34
CLK4-201ENST00000316308 WIPI1Q5MNZ9 446 aaPredicted RBP12.96□□□□□ -0.34
CLK4-201ENST00000316308 TMUB2Q71RG4 321 aa12.96□□□□□ -0.34
CLK4-201ENST00000316308 COMMD7Q86VX2 200 aa12.96□□□□□ -0.34
CLK4-201ENST00000316308 NAXEQ8NCW5 288 aa12.96□□□□□ -0.34
CLK4-201ENST00000316308 FGFBP3Q8TAT2 258 aa12.96□□□□□ -0.34
CLK4-201ENST00000316308 FOXRED1Q96CU9 486 aaPredicted RBP12.96□□□□□ -0.34
CLK4-201ENST00000316308 NTNG2Q96CW9 530 aa12.96□□□□□ -0.34
CLK4-201ENST00000316308 PGAM5Q96HS1 289 aa12.96□□□□□ -0.34
CLK4-201ENST00000316308 GPER1Q99527 375 aa12.96□□□□□ -0.34
CLK4-201ENST00000316308 WDR13Q9H1Z4 485 aa12.96□□□□□ -0.34
CLK4-201ENST00000316308 CER1O95813 267 aa12.95□□□□□ -0.34
CLK4-201ENST00000316308 MSR1P21757 451 aa12.95□□□□□ -0.34
CLK4-201ENST00000316308 CASRP41180 1078 aa12.95□□□□□ -0.34
CLK4-201ENST00000316308 ATXN7L3Q14CW9 347 aaPredicted RBP12.95□□□□□ -0.34
CLK4-201ENST00000316308 KCNMB1Q16558 191 aa12.95□□□□□ -0.34
CLK4-201ENST00000316308 CASTOR1Q8WTX7 329 aa12.95□□□□□ -0.34
CLK4-201ENST00000316308 TMEM54Q969K7 222 aa12.95□□□□□ -0.34
CLK4-201ENST00000316308 PTX4Q96A99 478 aa12.95□□□□□ -0.34
CLK4-201ENST00000316308 WBP1Q96G27 269 aa12.95□□□□□ -0.34
CLK4-201ENST00000316308 ZNF845Q96IR2 970 aaPredicted RBP12.95□□□□□ -0.34
CLK4-201ENST00000316308 UQCC2Q9BRT2 126 aa12.95□□□□□ -0.34
CLK4-201ENST00000316308 NELFAQ9H3P2 528 aa12.95□□□□□ -0.34
CLK4-201ENST00000316308 FOXD3Q9UJU5 478 aaPredicted RBP12.95□□□□□ -0.34
CLK4-201ENST00000316308 TCFL5Q9UL49 500 aa12.95□□□□□ -0.34
CLK4-201ENST00000316308 STMND1H3BQB6 276 aa12.95□□□□□ -0.34
CLK4-201ENST00000316308 DHHO43323 396 aa12.95□□□□□ -0.34
CLK4-201ENST00000316308 AKR1C4P17516 323 aa12.95□□□□□ -0.34
CLK4-201ENST00000316308 SSBP1Q04837 148 aaKnown RBP12.95□□□□□ -0.34
CLK4-201ENST00000316308 BAMBIQ13145 260 aa12.95□□□□□ -0.34
CLK4-201ENST00000316308 CAMK2BQ13554 666 aa12.95□□□□□ -0.34
CLK4-201ENST00000316308 MICBQ29980 383 aa12.95□□□□□ -0.34
CLK4-201ENST00000316308 NHLRC3Q5JS37 347 aa12.95□□□□□ -0.34
CLK4-201ENST00000316308 SPINK14Q6IE38 97 aa12.95□□□□□ -0.34
CLK4-201ENST00000316308 MARCH1Q8TCQ1 289 aa12.95□□□□□ -0.34
CLK4-201ENST00000316308 RHBDD1Q8TEB9 315 aa12.95□□□□□ -0.34
CLK4-201ENST00000316308 SSC4DQ8WTU2 575 aa12.95□□□□□ -0.34
CLK4-201ENST00000316308 RADILQ96JH8 1075 aa12.95□□□□□ -0.34
CLK4-201ENST00000316308 HES7Q9BYE0 225 aa12.95□□□□□ -0.34
CLK4-201ENST00000316308 PLEK2Q9NYT0 353 aa12.95□□□□□ -0.34
CLK4-201ENST00000316308 EP300Q09472 2414 aaPredicted RBP12.94□□□□□ -0.34
CLK4-201ENST00000316308 CCDC187A0A096LP49 1063 aa12.94□□□□□ -0.34
CLK4-201ENST00000316308 LOC102725191A0A1B0GVB3 256 aa12.94□□□□□ -0.34
CLK4-201ENST00000316308 LRRC3CA6NJW4 275 aa12.94□□□□□ -0.34
CLK4-201ENST00000316308 H3BUI4 141 aa12.94□□□□□ -0.34
CLK4-201ENST00000316308 I3L521 148 aa12.94□□□□□ -0.34
CLK4-201ENST00000316308 TRAPPC6AO75865 159 aa12.94□□□□□ -0.34
CLK4-201ENST00000316308 PLATP00750 562 aa12.94□□□□□ -0.34
CLK4-201ENST00000316308 IFNA7P01567 189 aa12.94□□□□□ -0.34
CLK4-201ENST00000316308 ACKR3P25106 362 aa12.94□□□□□ -0.34
CLK4-201ENST00000316308 KISS1Q15726 138 aa12.94□□□□□ -0.34
CLK4-201ENST00000316308 SLC23A3Q6PIS1 610 aa12.94□□□□□ -0.34
CLK4-201ENST00000316308 C3P1Q6ZMU1 363 aa12.94□□□□□ -0.34
CLK4-201ENST00000316308 GGNQ86UU5 652 aa12.94□□□□□ -0.34
CLK4-201ENST00000316308 ESX1Q8N693 406 aa12.94□□□□□ -0.34
CLK4-201ENST00000316308 OR14L1PQ8NHC6 308 aa12.94□□□□□ -0.34
CLK4-201ENST00000316308 COQ8AQ8NI60 647 aa12.94□□□□□ -0.34
CLK4-201ENST00000316308 CT55Q8WUE5 264 aa12.94□□□□□ -0.34
CLK4-201ENST00000316308 ARRDC1-AS1Q9H2J1 176 aa12.94□□□□□ -0.34
CLK4-201ENST00000316308 CRLF2Q9HC73 371 aa12.94□□□□□ -0.34
CLK4-201ENST00000316308 NOP16Q9Y3C1 178 aaKnown RBP12.94□□□□□ -0.34
CLK4-201ENST00000316308 SDCBPO00560 298 aaPredicted RBP12.94□□□□□ -0.34
CLK4-201ENST00000316308 CXCL13O43927 109 aa12.94□□□□□ -0.34
CLK4-201ENST00000316308 SPDEFO95238 335 aa12.94□□□□□ -0.34
CLK4-201ENST00000316308 ERCC1P07992 297 aaPredicted RBP12.94□□□□□ -0.34
CLK4-201ENST00000316308 MELTFP08582 738 aa12.94□□□□□ -0.34
CLK4-201ENST00000316308 B4GALT1P15291 398 aa12.94□□□□□ -0.34
CLK4-201ENST00000316308 CCL1P22362 96 aa12.94□□□□□ -0.34
CLK4-201ENST00000316308 S100A11P31949 105 aa12.94□□□□□ -0.34
CLK4-201ENST00000316308 CCDC120Q96HB5 630 aa12.94□□□□□ -0.34
CLK4-201ENST00000316308 GSX2Q9BZM3 304 aa12.94□□□□□ -0.34
CLK4-201ENST00000316308 ULBP2Q9BZM5 246 aa12.94□□□□□ -0.34
CLK4-201ENST00000316308 ZNF224Q9NZL3 707 aa12.94□□□□□ -0.34
CLK4-201ENST00000316308 LOXL2Q9Y4K0 774 aa12.94□□□□□ -0.34
CLK4-201ENST00000316308 MAB21L2Q9Y586 359 aa12.94□□□□□ -0.34
CLK4-201ENST00000316308 AUP1Q9Y679 476 aa12.94□□□□□ -0.34
CLK4-201ENST00000316308 NBEAQ8NFP9 2946 aa12.94□□□□□ -0.34
CLK4-201ENST00000316308 FAM25EA8MYX2 175 aa12.93□□□□□ -0.34
CLK4-201ENST00000316308 ZNF205O95201 554 aa12.93□□□□□ -0.34
CLK4-201ENST00000316308 SERPINA2P20848 420 aa12.93□□□□□ -0.34
CLK4-201ENST00000316308 ZBTB25P24278 435 aa12.93□□□□□ -0.34
CLK4-201ENST00000316308 CLLU1Q5K131 121 aa12.93□□□□□ -0.34
CLK4-201ENST00000316308 C10orf128Q5T292 105 aa12.93□□□□□ -0.34
CLK4-201ENST00000316308 ZNF774Q6NX45 483 aa12.93□□□□□ -0.34
CLK4-201ENST00000316308 BEST3Q8N1M1 668 aa12.93□□□□□ -0.34
CLK4-201ENST00000316308 AKR7LQ8NHP1 331 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms