RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 DVL3Q92997 716 aaPredicted RBP16.05■□□□□ 0.16
CCDC43-201ENST00000315286 MS4A3Q96HJ5 214 aa16.05■□□□□ 0.16
CCDC43-201ENST00000315286 C1orf147Q96MC9 270 aaPredicted RBP16.05■□□□□ 0.16
CCDC43-201ENST00000315286 WNT5BQ9H1J7 359 aa16.05■□□□□ 0.16
CCDC43-201ENST00000315286 PARPBPQ9NWS1 579 aa16.05■□□□□ 0.16
CCDC43-201ENST00000315286 EMC3Q9P0I2 261 aa16.05■□□□□ 0.16
CCDC43-201ENST00000315286 FBLN5Q9UBX5 448 aa16.05■□□□□ 0.16
CCDC43-201ENST00000315286 TMEM235A6NFC5 223 aa16.04■□□□□ 0.16
CCDC43-201ENST00000315286 HPXP02790 462 aa16.04■□□□□ 0.16
CCDC43-201ENST00000315286 CD3DP04234 171 aa16.04■□□□□ 0.16
CCDC43-201ENST00000315286 THBS4P35443 961 aa16.04■□□□□ 0.16
CCDC43-201ENST00000315286 HTR5AP47898 357 aa16.04■□□□□ 0.16
CCDC43-201ENST00000315286 SSBP1Q04837 148 aaKnown RBP16.04■□□□□ 0.16
CCDC43-201ENST00000315286 UBE2V2Q15819 145 aa16.04■□□□□ 0.16
CCDC43-201ENST00000315286 KRTAP27-1Q3LI81 207 aa16.04■□□□□ 0.16
CCDC43-201ENST00000315286 RAB12Q6IQ22 244 aa16.04■□□□□ 0.16
CCDC43-201ENST00000315286 OR8S1Q8NH09 359 aa16.04■□□□□ 0.16
CCDC43-201ENST00000315286 DACT3Q96B18 629 aaPredicted RBP16.04■□□□□ 0.16
CCDC43-201ENST00000315286 LINC00470Q9BZP3 86 aa16.04■□□□□ 0.16
CCDC43-201ENST00000315286 SCPEP1Q9HB40 452 aa16.04■□□□□ 0.16
CCDC43-201ENST00000315286 PIGLQ9Y2B2 252 aa16.04■□□□□ 0.16
CCDC43-201ENST00000315286 ZFHX4Q86UP3 3567 aa16.04■□□□□ 0.16
CCDC43-201ENST00000315286 ICMTO60725 284 aa16.04■□□□□ 0.16
CCDC43-201ENST00000315286 NDUFB6O95139 128 aa16.04■□□□□ 0.16
CCDC43-201ENST00000315286 ACTL6AO96019 429 aa16.04■□□□□ 0.16
CCDC43-201ENST00000315286 AKAIN1P0CW23 69 aa16.04■□□□□ 0.16
CCDC43-201ENST00000315286 TNFSF10P50591 281 aa16.04■□□□□ 0.16
CCDC43-201ENST00000315286 PCBD1P61457 104 aa16.04■□□□□ 0.16
CCDC43-201ENST00000315286 MRPS15P82914 257 aaKnown RBP16.04■□□□□ 0.16
CCDC43-201ENST00000315286 MAB21L1Q13394 359 aa16.04■□□□□ 0.16
CCDC43-201ENST00000315286 ZNF260Q3ZCT1 412 aa16.04■□□□□ 0.16
CCDC43-201ENST00000315286 TMEM104Q8NE00 496 aa16.04■□□□□ 0.16
CCDC43-201ENST00000315286 OR2AE1Q8NHA4 323 aa16.04■□□□□ 0.16
CCDC43-201ENST00000315286 NPRL2Q8WTW4 380 aa16.04■□□□□ 0.16
CCDC43-201ENST00000315286 AQP3Q92482 292 aa16.04■□□□□ 0.16
CCDC43-201ENST00000315286 GPER1Q99527 375 aa16.04■□□□□ 0.16
CCDC43-201ENST00000315286 LDAHQ9H6V9 325 aa16.04■□□□□ 0.16
CCDC43-201ENST00000315286 BCO1Q9HAY6 547 aa16.04■□□□□ 0.16
CCDC43-201ENST00000315286 ZNF224Q9NZL3 707 aa16.04■□□□□ 0.16
CCDC43-201ENST00000315286 SMLR1H3BR10 107 aa16.03■□□□□ 0.16
CCDC43-201ENST00000315286 MTRF1O75570 445 aaKnown RBP16.03■□□□□ 0.16
CCDC43-201ENST00000315286 LCATP04180 440 aa16.03■□□□□ 0.16
CCDC43-201ENST00000315286 MMP7P09237 267 aaPredicted RBP16.03■□□□□ 0.16
CCDC43-201ENST00000315286 PRF1P14222 555 aa16.03■□□□□ 0.16
CCDC43-201ENST00000315286 ACTBP60709 375 aa16.03■□□□□ 0.16
CCDC43-201ENST00000315286 ACTG1P63261 375 aa16.03■□□□□ 0.16
CCDC43-201ENST00000315286 ARF1P84077 181 aaKnown RBP16.03■□□□□ 0.16
CCDC43-201ENST00000315286 IFITM2Q01629 132 aa16.03■□□□□ 0.16
CCDC43-201ENST00000315286 C9orf135Q5VTT2 229 aa16.03■□□□□ 0.16
CCDC43-201ENST00000315286 CD276Q5ZPR3 534 aa16.03■□□□□ 0.16
CCDC43-201ENST00000315286 CRIP3Q6Q6R5 217 aa16.03■□□□□ 0.16
CCDC43-201ENST00000315286 ZNF782Q6ZMW2 699 aaPredicted RBP16.03■□□□□ 0.16
CCDC43-201ENST00000315286 Q6ZTK2 550 aa16.03■□□□□ 0.16
CCDC43-201ENST00000315286 TMEM178AQ8NBL3 297 aa16.03■□□□□ 0.16
CCDC43-201ENST00000315286 CHST4Q8NCG5 386 aa16.03■□□□□ 0.16
CCDC43-201ENST00000315286 FDCSPQ8NFU4 85 aa16.03■□□□□ 0.16
CCDC43-201ENST00000315286 EXO5Q9H790 373 aa16.03■□□□□ 0.16
CCDC43-201ENST00000315286 TNFRSF10AO00220 468 aa16.03■□□□□ 0.16
CCDC43-201ENST00000315286 FARS2O95363 451 aaKnown RBP16.03■□□□□ 0.16
CCDC43-201ENST00000315286 YES1P07947 543 aa16.03■□□□□ 0.16
CCDC43-201ENST00000315286 CXCL3P19876 107 aa16.03■□□□□ 0.16
CCDC43-201ENST00000315286 KISS1Q15726 138 aa16.03■□□□□ 0.16
CCDC43-201ENST00000315286 STEAP1BQ6NZ63 245 aa16.03■□□□□ 0.16
CCDC43-201ENST00000315286 GABRG1Q8N1C3 465 aa16.03■□□□□ 0.16
CCDC43-201ENST00000315286 PP6455Q8WZ26 134 aa16.03■□□□□ 0.16
CCDC43-201ENST00000315286 NICN1Q9BSH3 213 aa16.03■□□□□ 0.16
CCDC43-201ENST00000315286 CHST5Q9GZS9 411 aa16.03■□□□□ 0.16
CCDC43-201ENST00000315286 BOLA1Q9Y3E2 137 aa16.03■□□□□ 0.16
CCDC43-201ENST00000315286 ZNF724A8MTY0 619 aa16.02■□□□□ 0.15
CCDC43-201ENST00000315286 RAD52P43351 418 aa16.02■□□□□ 0.15
CCDC43-201ENST00000315286 FOXG1P55316 489 aaPredicted RBP16.02■□□□□ 0.15
CCDC43-201ENST00000315286 NRN1LQ496H8 165 aa16.02■□□□□ 0.15
CCDC43-201ENST00000315286 CDNFQ49AH0 187 aa16.02■□□□□ 0.15
CCDC43-201ENST00000315286 IGF2-ASQ6U949 168 aa16.02■□□□□ 0.15
CCDC43-201ENST00000315286 CHMP1BQ7LBR1 199 aa16.02■□□□□ 0.15
CCDC43-201ENST00000315286 OR2W3Q7Z3T1 314 aa16.02■□□□□ 0.15
CCDC43-201ENST00000315286 CDH24Q86UP0 819 aa16.02■□□□□ 0.15
CCDC43-201ENST00000315286 REEP6Q96HR9 211 aa16.02■□□□□ 0.15
CCDC43-201ENST00000315286 LPAR5Q9H1C0 372 aa16.02■□□□□ 0.15
CCDC43-201ENST00000315286 RNF122Q9H9V4 155 aa16.02■□□□□ 0.15
CCDC43-201ENST00000315286 SPRR3Q9UBC9 169 aa16.02■□□□□ 0.15
CCDC43-201ENST00000315286 KLK13Q9UKR3 277 aa16.02■□□□□ 0.15
CCDC43-201ENST00000315286 DOCK7Q96N67 2140 aa16.02■□□□□ 0.15
CCDC43-201ENST00000315286 TRGV5A0A0B4J1U4 118 aa16.01■□□□□ 0.15
CCDC43-201ENST00000315286 A0A1W2PP11 408 aa16.01■□□□□ 0.15
CCDC43-201ENST00000315286 MPIG6BO95866 241 aa16.01■□□□□ 0.15
CCDC43-201ENST00000315286 C1QBP02746 253 aa16.01■□□□□ 0.15
CCDC43-201ENST00000315286 ANXA7P20073 488 aaKnown RBP16.01■□□□□ 0.15
CCDC43-201ENST00000315286 ACKR3P25106 362 aa16.01■□□□□ 0.15
CCDC43-201ENST00000315286 HOXD11P31277 338 aaPredicted RBP16.01■□□□□ 0.15
CCDC43-201ENST00000315286 TAS2R19P59542 299 aa16.01■□□□□ 0.15
CCDC43-201ENST00000315286 PMP22Q01453 160 aa16.01■□□□□ 0.15
CCDC43-201ENST00000315286 RTN4RL2Q86UN3 420 aa16.01■□□□□ 0.15
CCDC43-201ENST00000315286 TMEM229BQ8NBD8 167 aa16.01■□□□□ 0.15
CCDC43-201ENST00000315286 CCDC54Q8NEL0 328 aa16.01■□□□□ 0.15
CCDC43-201ENST00000315286 OR51S1Q8NGJ8 323 aa16.01■□□□□ 0.15
CCDC43-201ENST00000315286 OR5D18Q8NGL1 313 aa16.01■□□□□ 0.15
CCDC43-201ENST00000315286 C10orf35Q96D05 121 aa16.01■□□□□ 0.15
CCDC43-201ENST00000315286 WDYHV1Q96HA8 205 aa16.01■□□□□ 0.15
CCDC43-201ENST00000315286 BANF2Q9H503 90 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms