RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 CTAG2O75638 210 aa12.37□□□□□ -0.43
SPAST-201ENST00000315285 THBS4P35443 961 aa12.37□□□□□ -0.43
SPAST-201ENST00000315285 ELLP55199 621 aaPredicted RBP12.37□□□□□ -0.43
SPAST-201ENST00000315285 SCAND1P57086 179 aa12.37□□□□□ -0.43
SPAST-201ENST00000315285 GNPNAT1Q96EK6 184 aaPredicted RBP12.37□□□□□ -0.43
SPAST-201ENST00000315285 TMEM272A0A1B0GTI8 110 aa12.37□□□□□ -0.43
SPAST-201ENST00000315285 C4orf47A7E2U8 309 aa12.37□□□□□ -0.43
SPAST-201ENST00000315285 WDR1O75083 606 aa12.37□□□□□ -0.43
SPAST-201ENST00000315285 CELA2BP08218 269 aaPredicted RBP12.37□□□□□ -0.43
SPAST-201ENST00000315285 ARR3P36575 388 aa12.37□□□□□ -0.43
SPAST-201ENST00000315285 P2RX3P56373 397 aa12.37□□□□□ -0.43
SPAST-201ENST00000315285 C11orf87Q6NUJ2 197 aa12.37□□□□□ -0.43
SPAST-201ENST00000315285 NANPQ8TBE9 248 aa12.37□□□□□ -0.43
SPAST-201ENST00000315285 MIXL1Q9H2W2 232 aa12.37□□□□□ -0.43
SPAST-201ENST00000315285 PCDHB10Q9UN67 800 aa12.37□□□□□ -0.43
SPAST-201ENST00000315285 C1QCP02747 245 aa12.37□□□□□ -0.43
SPAST-201ENST00000315285 SSX2Q16385 188 aa12.37□□□□□ -0.43
SPAST-201ENST00000315285 ALKBH3Q96Q83 286 aaPredicted RBP12.37□□□□□ -0.43
SPAST-201ENST00000315285 MENTQ9BUN1 341 aa12.37□□□□□ -0.43
SPAST-201ENST00000315285 HLA-HP01893 362 aa12.36□□□□□ -0.43
SPAST-201ENST00000315285 NDUFA6P56556 154 aa12.36□□□□□ -0.43
SPAST-201ENST00000315285 BATFQ16520 125 aa12.36□□□□□ -0.43
SPAST-201ENST00000315285 FLRT3Q9NZU0 649 aa12.36□□□□□ -0.43
SPAST-201ENST00000315285 UMAD1C9J7I0 102 aa12.36□□□□□ -0.43
SPAST-201ENST00000315285 SSSCA1O60232 199 aa12.36□□□□□ -0.43
SPAST-201ENST00000315285 WNT11O96014 354 aa12.36□□□□□ -0.43
SPAST-201ENST00000315285 CCL7P80098 99 aa12.36□□□□□ -0.43
SPAST-201ENST00000315285 LSM11P83369 360 aaKnown RBP eCLIP12.36□□□□□ -0.43
SPAST-201ENST00000315285 OR8G1Q15617 311 aa12.36□□□□□ -0.43
SPAST-201ENST00000315285 DEGS2Q6QHC5 323 aa12.36□□□□□ -0.43
SPAST-201ENST00000315285 ZNF573Q86YE8 665 aa12.36□□□□□ -0.43
SPAST-201ENST00000315285 PCED1AQ9H1Q7 454 aa12.36□□□□□ -0.43
SPAST-201ENST00000315285 CRLF2Q9HC73 371 aa12.36□□□□□ -0.43
SPAST-201ENST00000315285 STRAPQ9Y3F4 350 aaKnown RBP12.36□□□□□ -0.43
SPAST-201ENST00000315285 MDFIC2A0A1B0GVS7 189 aa12.36□□□□□ -0.43
SPAST-201ENST00000315285 MT-ND4LP03901 98 aa12.36□□□□□ -0.43
SPAST-201ENST00000315285 H2BFWTQ7Z2G1 175 aa12.36□□□□□ -0.43
SPAST-201ENST00000315285 MUC20Q8N307 709 aaPredicted RBP12.36□□□□□ -0.43
SPAST-201ENST00000315285 DHRS9Q9BPW9 319 aa12.36□□□□□ -0.43
SPAST-201ENST00000315285 KLF13Q9Y2Y9 288 aaPredicted RBP12.36□□□□□ -0.43
SPAST-201ENST00000315285 ATG2BQ96BY7 2078 aa12.36□□□□□ -0.43
SPAST-201ENST00000315285 PSG6Q00889 435 aa12.36□□□□□ -0.43
SPAST-201ENST00000315285 FLI1Q01543 452 aaPredicted RBP12.36□□□□□ -0.43
SPAST-201ENST00000315285 OSR2Q8N2R0 312 aa12.36□□□□□ -0.43
SPAST-201ENST00000315285 OR2AE1Q8NHA4 323 aa12.36□□□□□ -0.43
SPAST-201ENST00000315285 AKR7LQ8NHP1 331 aa12.36□□□□□ -0.43
SPAST-201ENST00000315285 ROBO4Q8WZ75 1007 aa12.36□□□□□ -0.43
SPAST-201ENST00000315285 UQCC2Q9BRT2 126 aa12.36□□□□□ -0.43
SPAST-201ENST00000315285 SUCNR1Q9BXA5 334 aa12.36□□□□□ -0.43
SPAST-201ENST00000315285 DEFB127Q9H1M4 99 aa12.36□□□□□ -0.43
SPAST-201ENST00000315285 TUBG2Q9NRH3 451 aa12.36□□□□□ -0.43
SPAST-201ENST00000315285 KCNIP2Q9NS61 270 aa12.36□□□□□ -0.43
SPAST-201ENST00000315285 PPP1R2P9O14990 202 aa12.35□□□□□ -0.43
SPAST-201ENST00000315285 ANGPTL7O43827 346 aa12.35□□□□□ -0.43
SPAST-201ENST00000315285 HAAOP46952 286 aa12.35□□□□□ -0.43
SPAST-201ENST00000315285 DSCR4P56555 118 aaPredicted RBP12.35□□□□□ -0.43
SPAST-201ENST00000315285 HIST2H3AQ71DI3 136 aa12.35□□□□□ -0.43
SPAST-201ENST00000315285 ZDHHC22Q8N966 263 aa12.35□□□□□ -0.43
SPAST-201ENST00000315285 PTP4A1Q93096 173 aa12.35□□□□□ -0.43
SPAST-201ENST00000315285 BTF3L4Q96K17 158 aa12.35□□□□□ -0.43
SPAST-201ENST00000315285 ATAD5Q96QE3 1844 aa12.35□□□□□ -0.43
SPAST-201ENST00000315285 IGHV1OR21-1A0A087WYE8 117 aa12.35□□□□□ -0.43
SPAST-201ENST00000315285 IGHV3-64DA0A0J9YX35 117 aa12.35□□□□□ -0.43
SPAST-201ENST00000315285 CTLA4P16410 223 aa12.35□□□□□ -0.43
SPAST-201ENST00000315285 OR8B8Q15620 311 aa12.35□□□□□ -0.43
SPAST-201ENST00000315285 CEACAM16Q2WEN9 425 aa12.35□□□□□ -0.43
SPAST-201ENST00000315285 LIN37Q96GY3 246 aaPredicted RBP12.35□□□□□ -0.43
SPAST-201ENST00000315285 C1QTNF6Q9BXI9 259 aa12.35□□□□□ -0.43
SPAST-201ENST00000315285 PTPRZ1P23471 2315 aaPredicted RBP12.35□□□□□ -0.43
SPAST-201ENST00000315285 SIRPB1O00241 398 aa12.35□□□□□ -0.43
SPAST-201ENST00000315285 DCTN6O00399 190 aa12.35□□□□□ -0.43
SPAST-201ENST00000315285 SPRY1O43609 319 aaPredicted RBP12.35□□□□□ -0.43
SPAST-201ENST00000315285 EPPINO95925 133 aa12.35□□□□□ -0.43
SPAST-201ENST00000315285 ACSM4P0C7M7 580 aa12.35□□□□□ -0.43
SPAST-201ENST00000315285 PTAFRP25105 342 aa12.35□□□□□ -0.43
SPAST-201ENST00000315285 DUSP2Q05923 314 aa12.35□□□□□ -0.43
SPAST-201ENST00000315285 KIAA0141Q14154 515 aaPredicted RBP12.35□□□□□ -0.43
SPAST-201ENST00000315285 ZDHHC23Q8IYP9 409 aa12.35□□□□□ -0.43
SPAST-201ENST00000315285 CADM4Q8NFZ8 388 aa12.35□□□□□ -0.43
SPAST-201ENST00000315285 OR10G3Q8NGC4 313 aa12.35□□□□□ -0.43
SPAST-201ENST00000315285 MAP6Q96JE9 813 aa12.35□□□□□ -0.43
SPAST-201ENST00000315285 C12orf10Q9HB07 376 aa12.35□□□□□ -0.43
SPAST-201ENST00000315285 NGBQ9NPG2 151 aa12.35□□□□□ -0.43
SPAST-201ENST00000315285 PPP1R3CQ9UQK1 317 aa12.35□□□□□ -0.43
SPAST-201ENST00000315285 LOXL2Q9Y4K0 774 aa12.35□□□□□ -0.43
SPAST-201ENST00000315285 ZNF816-ZNF321PA0A0X1KG74 233 aa12.35□□□□□ -0.43
SPAST-201ENST00000315285 OGG1O15527 345 aa12.35□□□□□ -0.43
SPAST-201ENST00000315285 CD37P11049 281 aa12.35□□□□□ -0.43
SPAST-201ENST00000315285 HLA-DOBP13765 273 aa12.35□□□□□ -0.43
SPAST-201ENST00000315285 NFYBP25208 207 aa12.35□□□□□ -0.43
SPAST-201ENST00000315285 DHRS2Q13268 280 aa12.35□□□□□ -0.43
SPAST-201ENST00000315285 SLC10A1Q14973 349 aa12.35□□□□□ -0.43
SPAST-201ENST00000315285 HAGHQ16775 308 aa12.35□□□□□ -0.43
SPAST-201ENST00000315285 SPICQ8N5J4 248 aa12.35□□□□□ -0.43
SPAST-201ENST00000315285 DAZAP1Q96EP5 407 aaKnown RBP12.35□□□□□ -0.43
SPAST-201ENST00000315285 MRM2Q9UI43 246 aaKnown RBP12.35□□□□□ -0.43
SPAST-201ENST00000315285 MIA3Q5JRA6 1907 aa12.35□□□□□ -0.43
SPAST-201ENST00000315285 OR2V1Q8NHB1 315 aa12.34□□□□□ -0.43
SPAST-201ENST00000315285 C2CD4CQ8TF44 421 aa12.34□□□□□ -0.43
SPAST-201ENST00000315285 CMBLQ96DG6 245 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms