RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 TUBAL3A6NHL2 446 aa10.94□□□□□ -0.66
RNF4-201ENST00000314289 ISG15P05161 165 aa10.94□□□□□ -0.66
RNF4-201ENST00000314289 CLDN15P56746 228 aa10.94□□□□□ -0.66
RNF4-201ENST00000314289 RAP2BP61225 183 aa10.94□□□□□ -0.66
RNF4-201ENST00000314289 DEGS2Q6QHC5 323 aa10.94□□□□□ -0.66
RNF4-201ENST00000314289 TMUB2Q71RG4 321 aa10.94□□□□□ -0.66
RNF4-201ENST00000314289 OR5D18Q8NGL1 313 aa10.94□□□□□ -0.66
RNF4-201ENST00000314289 ABHD3Q8WU67 409 aa10.94□□□□□ -0.66
RNF4-201ENST00000314289 DMRTA2Q96SC8 542 aa10.94□□□□□ -0.66
RNF4-201ENST00000314289 ULBP2Q9BZM5 246 aa10.94□□□□□ -0.66
RNF4-201ENST00000314289 EMC3Q9P0I2 261 aa10.94□□□□□ -0.66
RNF4-201ENST00000314289 GPR160Q9UJ42 338 aa10.94□□□□□ -0.66
RNF4-201ENST00000314289 A0A1B0GTI1 187 aa10.94□□□□□ -0.66
RNF4-201ENST00000314289 ANKRD20A5PA0PJZ0 165 aa10.94□□□□□ -0.66
RNF4-201ENST00000314289 KRBOX1C9JBD0 128 aa10.94□□□□□ -0.66
RNF4-201ENST00000314289 RBBP9O75884 186 aa10.94□□□□□ -0.66
RNF4-201ENST00000314289 ECDO95905 644 aaPredicted RBP10.94□□□□□ -0.66
RNF4-201ENST00000314289 IGHEP01854 428 aa10.94□□□□□ -0.66
RNF4-201ENST00000314289 CSN2P05814 226 aa10.94□□□□□ -0.66
RNF4-201ENST00000314289 ZNF35P13682 527 aa10.94□□□□□ -0.66
RNF4-201ENST00000314289 SEC61A1P61619 476 aaKnown RBP10.94□□□□□ -0.66
RNF4-201ENST00000314289 CSNK2A1P68400 391 aaPredicted RBP10.94□□□□□ -0.66
RNF4-201ENST00000314289 GGNQ86UU5 652 aa10.94□□□□□ -0.66
RNF4-201ENST00000314289 OR10D3Q8NH80 312 aa10.94□□□□□ -0.66
RNF4-201ENST00000314289 TMEM41AQ96HV5 264 aa10.94□□□□□ -0.66
RNF4-201ENST00000314289 GPN1Q9HCN4 374 aaPredicted RBP10.94□□□□□ -0.66
RNF4-201ENST00000314289 TMEM235A6NFC5 223 aa10.93□□□□□ -0.66
RNF4-201ENST00000314289 GTF2F2P13984 249 aa10.93□□□□□ -0.66
RNF4-201ENST00000314289 C2orf68Q2NKX9 166 aa10.93□□□□□ -0.66
RNF4-201ENST00000314289 ZNF813Q6ZN06 617 aa10.93□□□□□ -0.66
RNF4-201ENST00000314289 OVCH2Q7RTZ1 564 aa10.93□□□□□ -0.66
RNF4-201ENST00000314289 IL22RA1Q8N6P7 574 aa10.93□□□□□ -0.66
RNF4-201ENST00000314289 RELL2Q8NC24 303 aaPredicted RBP10.93□□□□□ -0.66
RNF4-201ENST00000314289 OR4C16Q8NGL9 310 aa10.93□□□□□ -0.66
RNF4-201ENST00000314289 SCARB1Q8WTV0 552 aa10.93□□□□□ -0.66
RNF4-201ENST00000314289 CRLF2Q9HC73 371 aa10.93□□□□□ -0.66
RNF4-201ENST00000314289 IFT46Q9NQC8 304 aa10.93□□□□□ -0.66
RNF4-201ENST00000314289 CACNA1GO43497 2377 aa10.93□□□□□ -0.66
RNF4-201ENST00000314289 CCDC187A0A096LP49 1063 aa10.93□□□□□ -0.66
RNF4-201ENST00000314289 PYCARD-AS1I3L0S3 204 aa10.93□□□□□ -0.66
RNF4-201ENST00000314289 EIF1BO60739 113 aaKnown RBP10.93□□□□□ -0.66
RNF4-201ENST00000314289 CD3DP04234 171 aa10.93□□□□□ -0.66
RNF4-201ENST00000314289 ZNF20P17024 532 aa10.93□□□□□ -0.66
RNF4-201ENST00000314289 BDKRB2P30411 391 aa10.93□□□□□ -0.66
RNF4-201ENST00000314289 SRD5A2P31213 254 aa10.93□□□□□ -0.66
RNF4-201ENST00000314289 MNDAP41218 407 aa10.93□□□□□ -0.66
RNF4-201ENST00000314289 C9orf135Q5VTT2 229 aa10.93□□□□□ -0.66
RNF4-201ENST00000314289 C11orf88Q6PI97 169 aa10.93□□□□□ -0.66
RNF4-201ENST00000314289 TMEM123Q8N131 208 aa10.93□□□□□ -0.66
RNF4-201ENST00000314289 SPICQ8N5J4 248 aa10.93□□□□□ -0.66
RNF4-201ENST00000314289 OR1M1Q8NGA1 313 aa10.93□□□□□ -0.66
RNF4-201ENST00000314289 NAA11Q9BSU3 229 aaPredicted RBP10.93□□□□□ -0.66
RNF4-201ENST00000314289 MRI1Q9BV20 369 aa10.93□□□□□ -0.66
RNF4-201ENST00000314289 DDA1Q9BW61 102 aa10.93□□□□□ -0.66
RNF4-201ENST00000314289 TMEM9BQ9NQ34 198 aa10.93□□□□□ -0.66
RNF4-201ENST00000314289 ZNF292O60281 2723 aa10.93□□□□□ -0.66
RNF4-201ENST00000314289 KIAA1549Q9HCM3 1950 aa10.93□□□□□ -0.66
RNF4-201ENST00000314289 A0A1W2PP11 408 aa10.93□□□□□ -0.66
RNF4-201ENST00000314289 M0QYG6 137 aa10.93□□□□□ -0.66
RNF4-201ENST00000314289 GOSR2O14653 212 aa10.93□□□□□ -0.66
RNF4-201ENST00000314289 DHHO43323 396 aa10.93□□□□□ -0.66
RNF4-201ENST00000314289 B4GALT1P15291 398 aa10.93□□□□□ -0.66
RNF4-201ENST00000314289 MSR1P21757 451 aa10.93□□□□□ -0.66
RNF4-201ENST00000314289 DEFA5Q01523 94 aa10.93□□□□□ -0.66
RNF4-201ENST00000314289 PMPCAQ10713 525 aa10.93□□□□□ -0.66
RNF4-201ENST00000314289 ENDOGQ14249 297 aaKnown RBP10.93□□□□□ -0.66
RNF4-201ENST00000314289 GK2Q14410 553 aaPredicted RBP10.93□□□□□ -0.66
RNF4-201ENST00000314289 SLC22A6Q4U2R8 563 aa10.93□□□□□ -0.66
RNF4-201ENST00000314289 ZNF626Q68DY1 528 aa10.93□□□□□ -0.66
RNF4-201ENST00000314289 GSG1LQ6UXU4 331 aa10.93□□□□□ -0.66
RNF4-201ENST00000314289 TFAP2EQ6VUC0 442 aa10.93□□□□□ -0.66
RNF4-201ENST00000314289 CHST4Q8NCG5 386 aa10.93□□□□□ -0.66
RNF4-201ENST00000314289 BVESQ8NE79 360 aa10.93□□□□□ -0.66
RNF4-201ENST00000314289 FBXO17Q96EF6 278 aa10.93□□□□□ -0.66
RNF4-201ENST00000314289 ZPBPQ9BS86 351 aa10.93□□□□□ -0.66
RNF4-201ENST00000314289 PLEKHA1Q9HB21 404 aa10.93□□□□□ -0.66
RNF4-201ENST00000314289 TMEM138Q9NPI0 162 aa10.93□□□□□ -0.66
RNF4-201ENST00000314289 PLEK2Q9NYT0 353 aa10.93□□□□□ -0.66
RNF4-201ENST00000314289 A8MXK9 166 aa10.92□□□□□ -0.66
RNF4-201ENST00000314289 NEURL1O76050 574 aa10.92□□□□□ -0.66
RNF4-201ENST00000314289 ZNF17P17021 662 aa10.92□□□□□ -0.66
RNF4-201ENST00000314289 FSTP19883 344 aa10.92□□□□□ -0.66
RNF4-201ENST00000314289 PRSS3P35030 304 aa10.92□□□□□ -0.66
RNF4-201ENST00000314289 H2BFSP57053 126 aa10.92□□□□□ -0.66
RNF4-201ENST00000314289 C3AR1Q16581 482 aa10.92□□□□□ -0.66
RNF4-201ENST00000314289 DCAF10Q5QP82 559 aa10.92□□□□□ -0.66
RNF4-201ENST00000314289 ABHD17BQ5VST6 288 aa10.92□□□□□ -0.66
RNF4-201ENST00000314289 OR4S1Q8NGB4 309 aa10.92□□□□□ -0.66
RNF4-201ENST00000314289 OR51S1Q8NGJ8 323 aa10.92□□□□□ -0.66
RNF4-201ENST00000314289 LOC100509620A0A075B734 347 aa10.92□□□□□ -0.66
RNF4-201ENST00000314289 UBE2QL1A1L167 161 aa10.92□□□□□ -0.66
RNF4-201ENST00000314289 NAP1L6A6NFF2 107 aa10.92□□□□□ -0.66
RNF4-201ENST00000314289 H7C417 338 aa10.92□□□□□ -0.66
RNF4-201ENST00000314289 SULT1B1O43704 296 aa10.92□□□□□ -0.66
RNF4-201ENST00000314289 ITGB2P05107 769 aa10.92□□□□□ -0.66
RNF4-201ENST00000314289 VSIG10L2P0DP72 767 aa10.92□□□□□ -0.66
RNF4-201ENST00000314289 FOXO1Q12778 655 aa10.92□□□□□ -0.66
RNF4-201ENST00000314289 UNC119Q13432 240 aa10.92□□□□□ -0.66
RNF4-201ENST00000314289 ELFN2Q5R3F8 820 aa10.92□□□□□ -0.66
RNF4-201ENST00000314289 ADGRE4PQ86SQ3 457 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms