RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 EGR1P18146 543 aa12.18□□□□□ -0.46
PPP1CA-201ENST00000312989 FASP25445 335 aa12.18□□□□□ -0.46
PPP1CA-201ENST00000312989 HSD11B1P28845 292 aa12.18□□□□□ -0.46
PPP1CA-201ENST00000312989 GSK3AP49840 483 aa12.18□□□□□ -0.46
PPP1CA-201ENST00000312989 ROM1Q03395 351 aa12.18□□□□□ -0.46
PPP1CA-201ENST00000312989 ZNF826PQ6ZT77 177 aa12.18□□□□□ -0.46
PPP1CA-201ENST00000312989 PLPP7Q8NBV4 271 aa12.18□□□□□ -0.46
PPP1CA-201ENST00000312989 OR8B12Q8NGG6 310 aa12.18□□□□□ -0.46
PPP1CA-201ENST00000312989 OR52H1Q8NGJ2 320 aa12.18□□□□□ -0.46
PPP1CA-201ENST00000312989 CIB1Q99828 191 aa12.18□□□□□ -0.46
PPP1CA-201ENST00000312989 C19orf24Q9BVV8 132 aa12.18□□□□□ -0.46
PPP1CA-201ENST00000312989 GABARAPL3Q9BY60 117 aa12.18□□□□□ -0.46
PPP1CA-201ENST00000312989 YIPF3Q9GZM5 350 aa12.18□□□□□ -0.46
PPP1CA-201ENST00000312989 KRT84Q9NSB2 600 aa12.18□□□□□ -0.46
PPP1CA-201ENST00000312989 FAM206AQ9NX38 181 aa12.18□□□□□ -0.46
PPP1CA-201ENST00000312989 KIF17Q9P2E2 1029 aa12.18□□□□□ -0.46
PPP1CA-201ENST00000312989 OAZ3Q9UMX2 235 aa12.18□□□□□ -0.46
PPP1CA-201ENST00000312989 N6AMT1Q9Y5N5 214 aa12.18□□□□□ -0.46
PPP1CA-201ENST00000312989 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.18□□□□□ -0.46
PPP1CA-201ENST00000312989 TBX1O43435 398 aa12.18□□□□□ -0.46
PPP1CA-201ENST00000312989 MRPL3P09001 348 aaKnown RBP12.18□□□□□ -0.46
PPP1CA-201ENST00000312989 H2BFMP0C1H6 154 aa12.18□□□□□ -0.46
PPP1CA-201ENST00000312989 CPT2P23786 658 aa12.18□□□□□ -0.46
PPP1CA-201ENST00000312989 DDOSTP39656 456 aa12.18□□□□□ -0.46
PPP1CA-201ENST00000312989 ACTR3P61158 418 aa12.18□□□□□ -0.46
PPP1CA-201ENST00000312989 ZNF154Q13106 437 aa12.18□□□□□ -0.46
PPP1CA-201ENST00000312989 THEM6Q8WUY1 208 aa12.18□□□□□ -0.46
PPP1CA-201ENST00000312989 HPSE2Q8WWQ2 592 aa12.18□□□□□ -0.46
PPP1CA-201ENST00000312989 ITPKCQ96DU7 683 aa12.18□□□□□ -0.46
PPP1CA-201ENST00000312989 TLNRD1Q9H1K6 362 aa12.18□□□□□ -0.46
PPP1CA-201ENST00000312989 SEMA6AQ9H2E6 1030 aa12.18□□□□□ -0.46
PPP1CA-201ENST00000312989 C7orf69Q9H7B7 122 aa12.18□□□□□ -0.46
PPP1CA-201ENST00000312989 ADGRL4Q9HBW9 690 aa12.18□□□□□ -0.46
PPP1CA-201ENST00000312989 METRNQ9UJH8 293 aa12.18□□□□□ -0.46
PPP1CA-201ENST00000312989 LRCH1Q9Y2L9 728 aa12.18□□□□□ -0.46
PPP1CA-201ENST00000312989 RHBDD3Q9Y3P4 386 aa12.18□□□□□ -0.46
PPP1CA-201ENST00000312989 PPIAL4AQ9Y536 164 aa12.18□□□□□ -0.46
PPP1CA-201ENST00000312989 TCF21O43680 179 aa12.17□□□□□ -0.46
PPP1CA-201ENST00000312989 APOC1P02654 83 aa12.17□□□□□ -0.46
PPP1CA-201ENST00000312989 RPS2P15880 293 aaKnown RBP12.17□□□□□ -0.46
PPP1CA-201ENST00000312989 EPHA1P21709 976 aa12.17□□□□□ -0.46
PPP1CA-201ENST00000312989 CD80P33681 288 aa12.17□□□□□ -0.46
PPP1CA-201ENST00000312989 PAX8Q06710 450 aa12.17□□□□□ -0.46
PPP1CA-201ENST00000312989 TIGD6Q17RP2 521 aa12.17□□□□□ -0.46
PPP1CA-201ENST00000312989 NXNL2Q5VZ03 156 aa12.17□□□□□ -0.46
PPP1CA-201ENST00000312989 ZDHHC13Q8IUH4 622 aa12.17□□□□□ -0.46
PPP1CA-201ENST00000312989 TCEANCQ8N8B7 351 aa12.17□□□□□ -0.46
PPP1CA-201ENST00000312989 TMEM163Q8TC26 289 aa12.17□□□□□ -0.46
PPP1CA-201ENST00000312989 PYDC1Q8WXC3 89 aa12.17□□□□□ -0.46
PPP1CA-201ENST00000312989 CENPNQ96H22 339 aaPredicted RBP12.17□□□□□ -0.46
PPP1CA-201ENST00000312989 PLEKHA8Q96JA3 519 aa12.17□□□□□ -0.46
PPP1CA-201ENST00000312989 OR8B4Q96RC9 309 aa12.17□□□□□ -0.46
PPP1CA-201ENST00000312989 OSBPL10Q9BXB5 764 aa12.17□□□□□ -0.46
PPP1CA-201ENST00000312989 OR10A2Q9H208 303 aa12.17□□□□□ -0.46
PPP1CA-201ENST00000312989 RGCCQ9H4X1 137 aa12.17□□□□□ -0.46
PPP1CA-201ENST00000312989 BRD7Q9NPI1 651 aa12.17□□□□□ -0.46
PPP1CA-201ENST00000312989 ARHGAP32A7KAX9 2087 aa12.16□□□□□ -0.46
PPP1CA-201ENST00000312989 LRRC30A6NM36 301 aa12.16□□□□□ -0.46
PPP1CA-201ENST00000312989 C22orf46C9J442 243 aa12.16□□□□□ -0.46
PPP1CA-201ENST00000312989 C3orf80F5H4A9 247 aa12.16□□□□□ -0.46
PPP1CA-201ENST00000312989 PSMD9O00233 223 aa12.16□□□□□ -0.46
PPP1CA-201ENST00000312989 FCGR1AP12314 374 aa12.16□□□□□ -0.46
PPP1CA-201ENST00000312989 RPS7P62081 194 aaKnown RBP12.16□□□□□ -0.46
PPP1CA-201ENST00000312989 CSNK2BP67870 215 aa12.16□□□□□ -0.46
PPP1CA-201ENST00000312989 ELF3P78545 371 aaPredicted RBP12.16□□□□□ -0.46
PPP1CA-201ENST00000312989 MFGE8Q08431 387 aaPredicted RBP12.16□□□□□ -0.46
PPP1CA-201ENST00000312989 TEX36Q5VZQ5 186 aa12.16□□□□□ -0.46
PPP1CA-201ENST00000312989 DEGS2Q6QHC5 323 aa12.16□□□□□ -0.46
PPP1CA-201ENST00000312989 DCDC5Q6ZRR9 648 aa12.16□□□□□ -0.46
PPP1CA-201ENST00000312989 MEPCEQ7L2J0 689 aaKnown RBP12.16□□□□□ -0.46
PPP1CA-201ENST00000312989 C1orf87Q8N0U7 546 aa12.16□□□□□ -0.46
PPP1CA-201ENST00000312989 SPERTQ8NA61 448 aa12.16□□□□□ -0.46
PPP1CA-201ENST00000312989 OR1M1Q8NGA1 313 aa12.16□□□□□ -0.46
PPP1CA-201ENST00000312989 NEIL1Q96FI4 390 aaPredicted RBP12.16□□□□□ -0.46
PPP1CA-201ENST00000312989 PGAM5Q96HS1 289 aa12.16□□□□□ -0.46
PPP1CA-201ENST00000312989 PKP2Q99959 881 aa12.16□□□□□ -0.46
PPP1CA-201ENST00000312989 SSBP3Q9BWW4 388 aaPredicted RBP12.16□□□□□ -0.46
PPP1CA-201ENST00000312989 NIPAL2Q9H841 368 aa12.16□□□□□ -0.46
PPP1CA-201ENST00000312989 FN3KRPQ9HA64 309 aa12.16□□□□□ -0.46
PPP1CA-201ENST00000312989 SMURF1Q9HCE7 757 aa12.16□□□□□ -0.46
PPP1CA-201ENST00000312989 ESM1Q9NQ30 184 aa12.16□□□□□ -0.46
PPP1CA-201ENST00000312989 C1orf123Q9NWV4 160 aa12.16□□□□□ -0.46
PPP1CA-201ENST00000312989 HAO2Q9NYQ3 351 aa12.16□□□□□ -0.46
PPP1CA-201ENST00000312989 RNF7Q9UBF6 113 aa12.16□□□□□ -0.46
PPP1CA-201ENST00000312989 MIOXQ9UGB7 285 aa12.16□□□□□ -0.46
PPP1CA-201ENST00000312989 LAMP5Q9UJQ1 280 aa12.16□□□□□ -0.46
PPP1CA-201ENST00000312989 PCDHB10Q9UN67 800 aa12.16□□□□□ -0.46
PPP1CA-201ENST00000312989 NOP16Q9Y3C1 178 aaKnown RBP12.16□□□□□ -0.46
PPP1CA-201ENST00000312989 IGHV2-70DA0A0C4DH43 119 aa12.15□□□□□ -0.46
PPP1CA-201ENST00000312989 LGALS8O00214 317 aa12.15□□□□□ -0.46
PPP1CA-201ENST00000312989 MAGEB4O15481 346 aaPredicted RBP12.15□□□□□ -0.46
PPP1CA-201ENST00000312989 CST4P01036 141 aa12.15□□□□□ -0.46
PPP1CA-201ENST00000312989 AMY2BP19961 511 aa12.15□□□□□ -0.46
PPP1CA-201ENST00000312989 DCTDP32321 178 aa12.15□□□□□ -0.46
PPP1CA-201ENST00000312989 HILS1P60008 231 aa12.15□□□□□ -0.46
PPP1CA-201ENST00000312989 KPNB1Q14974 876 aaKnown RBP12.15□□□□□ -0.46
PPP1CA-201ENST00000312989 GFOD2Q3B7J2 385 aa12.15□□□□□ -0.46
PPP1CA-201ENST00000312989 ESCO2Q56NI9 601 aa12.15□□□□□ -0.46
PPP1CA-201ENST00000312989 WDR25Q64LD2 544 aaPredicted RBP12.15□□□□□ -0.46
PPP1CA-201ENST00000312989 WDR82Q6UXN9 313 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms