RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 PRRG3Q9BZD7 231 aa10.14□□□□□ -0.79
SCFD1-201ENST00000311943 HAO2Q9NYQ3 351 aa10.14□□□□□ -0.79
SCFD1-201ENST00000311943 C2CD3Q4AC94 2353 aa10.13□□□□□ -0.79
SCFD1-201ENST00000311943 ZNF850A8MQ14 1090 aa10.13□□□□□ -0.79
SCFD1-201ENST00000311943 H3BSA7 217 aa10.13□□□□□ -0.79
SCFD1-201ENST00000311943 P2RY10O00398 339 aa10.13□□□□□ -0.79
SCFD1-201ENST00000311943 MT-ND5P03915 603 aa10.13□□□□□ -0.79
SCFD1-201ENST00000311943 DBTP11182 482 aaKnown RBP10.13□□□□□ -0.79
SCFD1-201ENST00000311943 THBS2P35442 1172 aa10.13□□□□□ -0.79
SCFD1-201ENST00000311943 ATP6V1E1P36543 226 aa10.13□□□□□ -0.79
SCFD1-201ENST00000311943 MTNR1AP48039 350 aa10.13□□□□□ -0.79
SCFD1-201ENST00000311943 NANOS3P60323 173 aaKnown RBP10.13□□□□□ -0.79
SCFD1-201ENST00000311943 SNRPGP62308 76 aaKnown RBP10.13□□□□□ -0.79
SCFD1-201ENST00000311943 CEP78Q5JTW2 689 aa10.13□□□□□ -0.79
SCFD1-201ENST00000311943 OGFRL1Q5TC84 451 aaPredicted RBP10.13□□□□□ -0.79
SCFD1-201ENST00000311943 C11orf53Q8IXP5 236 aa10.13□□□□□ -0.79
SCFD1-201ENST00000311943 C10orf67Q8IYJ2 551 aa10.13□□□□□ -0.79
SCFD1-201ENST00000311943 PRSS35Q8N3Z0 413 aa10.13□□□□□ -0.79
SCFD1-201ENST00000311943 FGFRL1Q8N441 504 aa10.13□□□□□ -0.79
SCFD1-201ENST00000311943 DEFB108BQ8NET1 73 aa10.13□□□□□ -0.79
SCFD1-201ENST00000311943 GPR84Q9NQS5 396 aa10.13□□□□□ -0.79
SCFD1-201ENST00000311943 WARS2Q9UGM6 360 aaKnown RBP10.13□□□□□ -0.79
SCFD1-201ENST00000311943 IL19Q9UHD0 177 aa10.13□□□□□ -0.79
SCFD1-201ENST00000311943 A0A1B0GW55 424 aa10.12□□□□□ -0.79
SCFD1-201ENST00000311943 E9PI62 339 aa10.12□□□□□ -0.79
SCFD1-201ENST00000311943 ZNF670-ZNF695F2Z2N8 137 aa10.12□□□□□ -0.79
SCFD1-201ENST00000311943 J3QW42 95 aa10.12□□□□□ -0.79
SCFD1-201ENST00000311943 CD5LO43866 347 aa10.12□□□□□ -0.79
SCFD1-201ENST00000311943 FAM20BO75063 409 aa10.12□□□□□ -0.79
SCFD1-201ENST00000311943 CSF3P09919 207 aa10.12□□□□□ -0.79
SCFD1-201ENST00000311943 DUX4L2P0CJ85 424 aa10.12□□□□□ -0.79
SCFD1-201ENST00000311943 DUX4L3P0CJ86 424 aa10.12□□□□□ -0.79
SCFD1-201ENST00000311943 DUX4L4P0CJ87 422 aa10.12□□□□□ -0.79
SCFD1-201ENST00000311943 DUX4L5P0CJ88 424 aa10.12□□□□□ -0.79
SCFD1-201ENST00000311943 DUX4L6P0CJ89 424 aa10.12□□□□□ -0.79
SCFD1-201ENST00000311943 DUX4L7P0CJ90 424 aa10.12□□□□□ -0.79
SCFD1-201ENST00000311943 FAHP16930 419 aa10.12□□□□□ -0.79
SCFD1-201ENST00000311943 EGR1P18146 543 aa10.12□□□□□ -0.79
SCFD1-201ENST00000311943 ADARB1P78563 741 aaKnown RBP10.12□□□□□ -0.79
SCFD1-201ENST00000311943 IL5RAQ01344 420 aa10.12□□□□□ -0.79
SCFD1-201ENST00000311943 OR8G1Q15617 311 aa10.12□□□□□ -0.79
SCFD1-201ENST00000311943 OCLNQ16625 522 aa10.12□□□□□ -0.79
SCFD1-201ENST00000311943 MOGQ16653 247 aa10.12□□□□□ -0.79
SCFD1-201ENST00000311943 DUX4L9Q6RFH8 374 aaPredicted RBP10.12□□□□□ -0.79
SCFD1-201ENST00000311943 LYPD2Q6UXB3 125 aa10.12□□□□□ -0.79
SCFD1-201ENST00000311943 YIPF7Q8N8F6 280 aa10.12□□□□□ -0.79
SCFD1-201ENST00000311943 OR10AC1Q8NH08 325 aa10.12□□□□□ -0.79
SCFD1-201ENST00000311943 HPSE2Q8WWQ2 592 aa10.12□□□□□ -0.79
SCFD1-201ENST00000311943 PIGCQ92535 297 aa10.12□□□□□ -0.79
SCFD1-201ENST00000311943 COG8Q96MW5 612 aa10.12□□□□□ -0.79
SCFD1-201ENST00000311943 PAPOLGQ9BWT3 736 aaKnown RBP10.12□□□□□ -0.79
SCFD1-201ENST00000311943 CYSLTR2Q9NS75 346 aa10.12□□□□□ -0.79
SCFD1-201ENST00000311943 DUX4Q9UBX2 424 aa10.12□□□□□ -0.79
SCFD1-201ENST00000311943 ENOPH1Q9UHY7 261 aa10.12□□□□□ -0.79
SCFD1-201ENST00000311943 PCDHGB5Q9Y5G0 923 aa10.12□□□□□ -0.79
SCFD1-201ENST00000311943 NAV3Q8IVL0 2385 aa10.12□□□□□ -0.79
SCFD1-201ENST00000311943 JMJD1CQ15652 2540 aa10.12□□□□□ -0.79
SCFD1-201ENST00000311943 A0A1B0GTI1 187 aa10.12□□□□□ -0.79
SCFD1-201ENST00000311943 A0A1B0GWJ7 208 aa10.12□□□□□ -0.79
SCFD1-201ENST00000311943 TMEM178BH3BS89 294 aa10.12□□□□□ -0.79
SCFD1-201ENST00000311943 SLC16A6O15403 523 aa10.12□□□□□ -0.79
SCFD1-201ENST00000311943 FCN3O75636 299 aa10.12□□□□□ -0.79
SCFD1-201ENST00000311943 ZFP36P26651 326 aaKnown RBP10.12□□□□□ -0.79
SCFD1-201ENST00000311943 KIR3DL2P43630 455 aa10.12□□□□□ -0.79
SCFD1-201ENST00000311943 RIDAP52758 137 aaKnown RBP10.12□□□□□ -0.79
SCFD1-201ENST00000311943 TMEM33P57088 247 aa10.12□□□□□ -0.79
SCFD1-201ENST00000311943 WDR38Q5JTN6 314 aa10.12□□□□□ -0.79
SCFD1-201ENST00000311943 XAF1Q6GPH4 301 aa10.12□□□□□ -0.79
SCFD1-201ENST00000311943 KCTD18Q6PI47 426 aaPredicted RBP10.12□□□□□ -0.79
SCFD1-201ENST00000311943 RNF144BQ7Z419 303 aa10.12□□□□□ -0.79
SCFD1-201ENST00000311943 COMMD2Q86X83 199 aa10.12□□□□□ -0.79
SCFD1-201ENST00000311943 PRIMA1Q86XR5 153 aa10.12□□□□□ -0.79
SCFD1-201ENST00000311943 C1orf174Q8IYL3 243 aa10.12□□□□□ -0.79
SCFD1-201ENST00000311943 SGCDQ92629 289 aa10.12□□□□□ -0.79
SCFD1-201ENST00000311943 OR10A2Q9H208 303 aa10.12□□□□□ -0.79
SCFD1-201ENST00000311943 NIPAL2Q9H841 368 aa10.12□□□□□ -0.79
SCFD1-201ENST00000311943 MYOZ1Q9NP98 299 aaPredicted RBP10.12□□□□□ -0.79
SCFD1-201ENST00000311943 GNG8Q9UK08 70 aa10.12□□□□□ -0.79
SCFD1-201ENST00000311943 MXRA5Q9NR99 2828 aa10.11□□□□□ -0.79
SCFD1-201ENST00000311943 IGHV3OR15-7A0A075B7D8 119 aa10.11□□□□□ -0.79
SCFD1-201ENST00000311943 CLDN25C9JDP6 229 aa10.11□□□□□ -0.79
SCFD1-201ENST00000311943 CASQ2O14958 399 aaPredicted RBP10.11□□□□□ -0.79
SCFD1-201ENST00000311943 PHF1O43189 567 aaPredicted RBP10.11□□□□□ -0.79
SCFD1-201ENST00000311943 XRCC2O43543 280 aa10.11□□□□□ -0.79
SCFD1-201ENST00000311943 AVPP01185 164 aa10.11□□□□□ -0.79
SCFD1-201ENST00000311943 IGHV2-70P01814 119 aa10.11□□□□□ -0.79
SCFD1-201ENST00000311943 OR2T7P0C7T2 308 aa10.11□□□□□ -0.79
SCFD1-201ENST00000311943 CD80P33681 288 aa10.11□□□□□ -0.79
SCFD1-201ENST00000311943 LIPAP38571 399 aa10.11□□□□□ -0.79
SCFD1-201ENST00000311943 GTF2A1P52655 376 aaPredicted RBP10.11□□□□□ -0.79
SCFD1-201ENST00000311943 ZNF691Q5VV52 312 aa10.11□□□□□ -0.79
SCFD1-201ENST00000311943 RHOUQ7L0Q8 258 aa10.11□□□□□ -0.79
SCFD1-201ENST00000311943 OR2T27Q8NH04 317 aa10.11□□□□□ -0.79
SCFD1-201ENST00000311943 TRUB1Q8WWH5 349 aaKnown RBP10.11□□□□□ -0.79
SCFD1-201ENST00000311943 EGLN1Q9GZT9 426 aa10.11□□□□□ -0.79
SCFD1-201ENST00000311943 RASSF4Q9H2L5 321 aa10.11□□□□□ -0.79
SCFD1-201ENST00000311943 OR52A1Q9UKL2 312 aa10.11□□□□□ -0.79
SCFD1-201ENST00000311943 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.11□□□□□ -0.799e-7■■■■■ 35.8
SCFD1-201ENST00000311943 LOC110117498-PIK3R3F6TDL0 507 aa10.11□□□□□ -0.79
SCFD1-201ENST00000311943 XPNPEP2O43895 674 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms