RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 PTX4Q96A99 478 aa10.36□□□□□ -0.75
TRIM40-205ENST00000307859 C10orf35Q96D05 121 aa10.36□□□□□ -0.75
TRIM40-205ENST00000307859 NKX3-1Q99801 234 aaPredicted RBP10.36□□□□□ -0.75
TRIM40-205ENST00000307859 OR10A2Q9H208 303 aa10.36□□□□□ -0.75
TRIM40-205ENST00000307859 KCNK15Q9H427 330 aa10.36□□□□□ -0.75
TRIM40-205ENST00000307859 AUNIPQ9H7T9 357 aa10.36□□□□□ -0.75
TRIM40-205ENST00000307859 GLRX2Q9NS18 164 aa10.36□□□□□ -0.75
TRIM40-205ENST00000307859 UPB1Q9UBR1 384 aa10.36□□□□□ -0.75
TRIM40-205ENST00000307859 RBMX2Q9Y388 322 aaKnown RBP10.36□□□□□ -0.75
TRIM40-205ENST00000307859 CREBBPQ92793 2442 aa10.36□□□□□ -0.75
TRIM40-205ENST00000307859 CIB4A0PJX0 185 aa10.36□□□□□ -0.75
TRIM40-205ENST00000307859 DHRS7CA6NNS2 312 aa10.36□□□□□ -0.75
TRIM40-205ENST00000307859 SS18L1O75177 396 aaPredicted RBP10.36□□□□□ -0.75
TRIM40-205ENST00000307859 ALX3O95076 343 aa10.36□□□□□ -0.75
TRIM40-205ENST00000307859 ALDOBP05062 364 aa10.36□□□□□ -0.75
TRIM40-205ENST00000307859 CD3GP09693 182 aa10.36□□□□□ -0.75
TRIM40-205ENST00000307859 SFTPCP11686 197 aa10.36□□□□□ -0.75
TRIM40-205ENST00000307859 ARSBP15848 533 aa10.36□□□□□ -0.75
TRIM40-205ENST00000307859 FOXG1P55316 489 aaPredicted RBP10.36□□□□□ -0.75
TRIM40-205ENST00000307859 RIPPLY3P57055 190 aa10.36□□□□□ -0.75
TRIM40-205ENST00000307859 GPR176Q14439 515 aa10.36□□□□□ -0.75
TRIM40-205ENST00000307859 GFOD2Q3B7J2 385 aa10.36□□□□□ -0.75
TRIM40-205ENST00000307859 Q6ZS92 163 aa10.36□□□□□ -0.75
TRIM40-205ENST00000307859 FGD2Q7Z6J4 655 aa10.36□□□□□ -0.75
TRIM40-205ENST00000307859 SSC4DQ8WTU2 575 aa10.36□□□□□ -0.75
TRIM40-205ENST00000307859 ITPKCQ96DU7 683 aa10.36□□□□□ -0.75
TRIM40-205ENST00000307859 GMPPAQ96IJ6 420 aaPredicted RBP10.36□□□□□ -0.75
TRIM40-205ENST00000307859 TAAR6Q96RI8 345 aa10.36□□□□□ -0.75
TRIM40-205ENST00000307859 CNTD2Q9H8S5 307 aa10.36□□□□□ -0.75
TRIM40-205ENST00000307859 CACNG2Q9Y698 323 aa10.36□□□□□ -0.75
TRIM40-205ENST00000307859 GGT3PA6NGU5 568 aa10.35□□□□□ -0.75
TRIM40-205ENST00000307859 MTRF1O75570 445 aaKnown RBP10.35□□□□□ -0.75
TRIM40-205ENST00000307859 BPNT1O95861 308 aa10.35□□□□□ -0.75
TRIM40-205ENST00000307859 COX5BP10606 129 aa10.35□□□□□ -0.75
TRIM40-205ENST00000307859 RAB6AP20340 208 aa10.35□□□□□ -0.75
TRIM40-205ENST00000307859 SLC6A1P30531 599 aa10.35□□□□□ -0.75
TRIM40-205ENST00000307859 BTCP35070 178 aa10.35□□□□□ -0.75
TRIM40-205ENST00000307859 GDNFP39905 211 aa10.35□□□□□ -0.75
TRIM40-205ENST00000307859 OR3A2P47893 321 aa10.35□□□□□ -0.75
TRIM40-205ENST00000307859 FAPQ12884 760 aa10.35□□□□□ -0.75
TRIM40-205ENST00000307859 KLF9Q13886 244 aaPredicted RBP10.35□□□□□ -0.75
TRIM40-205ENST00000307859 GUSBP1Q15486 140 aa10.35□□□□□ -0.75
TRIM40-205ENST00000307859 PABPC1L2AQ5JQF8 200 aa10.35□□□□□ -0.75
TRIM40-205ENST00000307859 UTS2BQ765I0 119 aa10.35□□□□□ -0.75
TRIM40-205ENST00000307859 UBE2J2Q8N2K1 259 aa10.35□□□□□ -0.75
TRIM40-205ENST00000307859 TOMM5Q8N4H5 51 aa10.35□□□□□ -0.75
TRIM40-205ENST00000307859 OR52I2Q8NH67 350 aa10.35□□□□□ -0.75
TRIM40-205ENST00000307859 SGK3Q96BR1 496 aa10.35□□□□□ -0.75
TRIM40-205ENST00000307859 SARAFQ96BY9 339 aa10.35□□□□□ -0.75
TRIM40-205ENST00000307859 C7orf50Q9BRJ6 194 aaKnown RBP10.35□□□□□ -0.75
TRIM40-205ENST00000307859 MMP28Q9H239 520 aa10.35□□□□□ -0.75
TRIM40-205ENST00000307859 DIABLOQ9NR28 239 aa10.35□□□□□ -0.75
TRIM40-205ENST00000307859 FBLN5Q9UBX5 448 aa10.35□□□□□ -0.75
TRIM40-205ENST00000307859 PRSS50Q9UI38 385 aa10.35□□□□□ -0.75
TRIM40-205ENST00000307859 ZNF391Q9UJN7 358 aa10.35□□□□□ -0.75
TRIM40-205ENST00000307859 INTS1Q8N201 2190 aaKnown RBP10.35□□□□□ -0.75
TRIM40-205ENST00000307859 ATMQ13315 3056 aa10.35□□□□□ -0.75
TRIM40-205ENST00000307859 A0A0A6YYH2 397 aa10.34□□□□□ -0.75
TRIM40-205ENST00000307859 IGKV1-9A0A0C4DH69 117 aa10.34□□□□□ -0.75
TRIM40-205ENST00000307859 FAM240BA0A1B0GVZ2 78 aa10.34□□□□□ -0.75
TRIM40-205ENST00000307859 A6NJ64 397 aa10.34□□□□□ -0.75
TRIM40-205ENST00000307859 ORC5O43913 435 aa10.34□□□□□ -0.75
TRIM40-205ENST00000307859 WISP2O76076 250 aa10.34□□□□□ -0.75
TRIM40-205ENST00000307859 KDM4BO94953 1096 aa10.34□□□□□ -0.75
TRIM40-205ENST00000307859 PDGFAP04085 211 aa10.34□□□□□ -0.75
TRIM40-205ENST00000307859 PRF1P14222 555 aa10.34□□□□□ -0.75
TRIM40-205ENST00000307859 ZNF93P35789 620 aaPredicted RBP10.34□□□□□ -0.75
TRIM40-205ENST00000307859 RANBP1P43487 201 aa10.34□□□□□ -0.75
TRIM40-205ENST00000307859 SRP9P49458 86 aaKnown RBP10.34□□□□□ -0.75
TRIM40-205ENST00000307859 QRFPP83859 136 aa10.34□□□□□ -0.75
TRIM40-205ENST00000307859 DYRK1AQ13627 763 aa10.34□□□□□ -0.75
TRIM40-205ENST00000307859 RNASE12Q5GAN4 147 aaKnown RBP10.34□□□□□ -0.75
TRIM40-205ENST00000307859 FBXW9Q5XUX1 488 aa10.34□□□□□ -0.75
TRIM40-205ENST00000307859 P4HA3Q7Z4N8 544 aa10.34□□□□□ -0.75
TRIM40-205ENST00000307859 CPEB3Q8NE35 698 aaKnown RBP10.34□□□□□ -0.75
TRIM40-205ENST00000307859 FCAMRQ8WWV6 532 aa10.34□□□□□ -0.75
TRIM40-205ENST00000307859 PP6455Q8WZ26 134 aa10.34□□□□□ -0.75
TRIM40-205ENST00000307859 GCDHQ92947 438 aaPredicted RBP10.34□□□□□ -0.75
TRIM40-205ENST00000307859 PSMG3-AS1Q96PY0 264 aa10.34□□□□□ -0.75
TRIM40-205ENST00000307859 CHST5Q9GZS9 411 aa10.34□□□□□ -0.75
TRIM40-205ENST00000307859 RGCCQ9H4X1 137 aa10.34□□□□□ -0.75
TRIM40-205ENST00000307859 C12orf49Q9H741 205 aa10.34□□□□□ -0.75
TRIM40-205ENST00000307859 RNF121Q9H920 327 aa10.34□□□□□ -0.75
TRIM40-205ENST00000307859 B3GNT2Q9NY97 397 aa10.34□□□□□ -0.75
TRIM40-205ENST00000307859 OR14I1A6ND48 311 aa10.33□□□□□ -0.76
TRIM40-205ENST00000307859 IL18BPO95998 194 aa10.33□□□□□ -0.76
TRIM40-205ENST00000307859 LCATP04180 440 aa10.33□□□□□ -0.76
TRIM40-205ENST00000307859 HNRNPCP07910 306 aaKnown RBP eCLIP10.33□□□□□ -0.76
TRIM40-205ENST00000307859 MPGP29372 298 aa10.33□□□□□ -0.76
TRIM40-205ENST00000307859 PLA1AQ53H76 456 aa10.33□□□□□ -0.76
TRIM40-205ENST00000307859 C9orf135Q5VTT2 229 aa10.33□□□□□ -0.76
TRIM40-205ENST00000307859 AGAP6Q5VW22 663 aa10.33□□□□□ -0.76
TRIM40-205ENST00000307859 RPUSD3Q6P087 351 aaKnown RBP10.33□□□□□ -0.76
TRIM40-205ENST00000307859 PLET1Q6UQ28 207 aa10.33□□□□□ -0.76
TRIM40-205ENST00000307859 COLCA1Q6ZS62 124 aa10.33□□□□□ -0.76
TRIM40-205ENST00000307859 KRT74Q7RTS7 529 aa10.33□□□□□ -0.76
TRIM40-205ENST00000307859 DPPA2Q7Z7J5 298 aa10.33□□□□□ -0.76
TRIM40-205ENST00000307859 RBMXL3Q8N7X1 1067 aaKnown RBP10.33□□□□□ -0.76
TRIM40-205ENST00000307859 OR1K1Q8NGR3 316 aa10.33□□□□□ -0.76
TRIM40-205ENST00000307859 REEP6Q96HR9 211 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms