RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 RNASE1P07998 156 aaKnown RBP11.43□□□□□ -0.58
USP38-201ENST00000307017 PPIAP62937 165 aaKnown RBP11.43□□□□□ -0.58
USP38-201ENST00000307017 ST3GAL2Q16842 350 aa11.43□□□□□ -0.58
USP38-201ENST00000307017 OPN5Q6U736 354 aa11.43□□□□□ -0.58
USP38-201ENST00000307017 OR1L4Q8NGR5 311 aa11.43□□□□□ -0.58
USP38-201ENST00000307017 MZB1Q8WU39 189 aa11.43□□□□□ -0.58
USP38-201ENST00000307017 ALKBH3Q96Q83 286 aaPredicted RBP11.43□□□□□ -0.58
USP38-201ENST00000307017 SLC25A22Q9H936 323 aa11.43□□□□□ -0.58
USP38-201ENST00000307017 CHRNA9Q9UGM1 479 aa11.43□□□□□ -0.58
USP38-201ENST00000307017 LHX6Q9UPM6 363 aa11.43□□□□□ -0.58
USP38-201ENST00000307017 CSN1S1P47710 185 aa11.43□□□□□ -0.58
USP38-201ENST00000307017 TSPO2Q5TGU0 170 aa11.43□□□□□ -0.58
USP38-201ENST00000307017 AFMIDQ63HM1 303 aa11.43□□□□□ -0.58
USP38-201ENST00000307017 FAM71E1Q6IPT2 247 aa11.43□□□□□ -0.58
USP38-201ENST00000307017 ABHD17CQ6PCB6 329 aa11.43□□□□□ -0.58
USP38-201ENST00000307017 RSPO2Q6UXX9 243 aaPredicted RBP11.43□□□□□ -0.58
USP38-201ENST00000307017 ZNF66Q6ZN08 573 aa11.43□□□□□ -0.58
USP38-201ENST00000307017 SLC25A26Q70HW3 274 aa11.43□□□□□ -0.58
USP38-201ENST00000307017 GJC3Q8NFK1 279 aa11.43□□□□□ -0.58
USP38-201ENST00000307017 APH1AQ96BI3 265 aa11.43□□□□□ -0.58
USP38-201ENST00000307017 ADAM29Q9UKF5 820 aa11.43□□□□□ -0.58
USP38-201ENST00000307017 TRAPPC2P0DI81 140 aa11.43□□□□□ -0.58
USP38-201ENST00000307017 TRAPPC2BP0DI82 140 aa11.43□□□□□ -0.58
USP38-201ENST00000307017 RBP2P50120 134 aa11.43□□□□□ -0.58
USP38-201ENST00000307017 GPNMBQ14956 572 aa11.43□□□□□ -0.58
USP38-201ENST00000307017 TFAP2EQ6VUC0 442 aa11.43□□□□□ -0.58
USP38-201ENST00000307017 OR10P1Q8NGE3 313 aa11.43□□□□□ -0.58
USP38-201ENST00000307017 RTN4IP1Q8WWV3 396 aaPredicted RBP11.43□□□□□ -0.58
USP38-201ENST00000307017 SUSD2Q9UGT4 822 aa11.43□□□□□ -0.58
USP38-201ENST00000307017 FAM157AC9JC47 383 aa11.43□□□□□ -0.58
USP38-201ENST00000307017 SLC38A9Q8NBW4 561 aa11.43□□□□□ -0.58
USP38-201ENST00000307017 RFESDQ8TAC1 157 aa11.43□□□□□ -0.58
USP38-201ENST00000307017 GAR1Q9NY12 217 aaKnown RBP11.43□□□□□ -0.58
USP38-201ENST00000307017 SCN2AQ99250 2005 aa11.43□□□□□ -0.58
USP38-201ENST00000307017 ACSM4P0C7M7 580 aa11.43□□□□□ -0.58
USP38-201ENST00000307017 NPY1RP25929 384 aa11.43□□□□□ -0.58
USP38-201ENST00000307017 FMODQ06828 376 aa11.43□□□□□ -0.58
USP38-201ENST00000307017 PRSS35Q8N3Z0 413 aa11.43□□□□□ -0.58
USP38-201ENST00000307017 ANKLE1Q8NAG6 615 aa11.43□□□□□ -0.58
USP38-201ENST00000307017 SPNS1Q9H2V7 528 aa11.43□□□□□ -0.58
USP38-201ENST00000307017 CLEC18AA5D8T8 446 aa11.42□□□□□ -0.58
USP38-201ENST00000307017 ST8SIA3O43173 380 aa11.42□□□□□ -0.58
USP38-201ENST00000307017 FFAR4Q5NUL3 377 aa11.42□□□□□ -0.58
USP38-201ENST00000307017 STUMQ69YW2 141 aa11.42□□□□□ -0.58
USP38-201ENST00000307017 TEX261Q6UWH6 196 aa11.42□□□□□ -0.58
USP38-201ENST00000307017 CLEC18CQ8NCF0 446 aa11.42□□□□□ -0.58
USP38-201ENST00000307017 KIAA1456Q9P272 454 aa11.42□□□□□ -0.58
USP38-201ENST00000307017 U3KQ87 197 aa11.42□□□□□ -0.58
USP38-201ENST00000307017 SRP14P37108 136 aaKnown RBP11.42□□□□□ -0.58
USP38-201ENST00000307017 ZNF133P52736 654 aaPredicted RBP11.42□□□□□ -0.58
USP38-201ENST00000307017 NHLH1Q02575 133 aa11.42□□□□□ -0.58
USP38-201ENST00000307017 NHLH2Q02577 135 aa11.42□□□□□ -0.58
USP38-201ENST00000307017 ZNF77Q15935 545 aa11.42□□□□□ -0.58
USP38-201ENST00000307017 CYB5R2Q6BCY4 276 aa11.42□□□□□ -0.58
USP38-201ENST00000307017 OR2AE1Q8NHA4 323 aa11.42□□□□□ -0.58
USP38-201ENST00000307017 ACTR3CQ9C0K3 210 aaPredicted RBP11.42□□□□□ -0.58
USP38-201ENST00000307017 ST3GAL6Q9Y274 331 aa11.42□□□□□ -0.58
USP38-201ENST00000307017 MYO5AQ9Y4I1 1855 aaKnown RBP11.42□□□□□ -0.58
USP38-201ENST00000307017 SH2D1BO14796 132 aa11.42□□□□□ -0.58
USP38-201ENST00000307017 EIF3GO75821 320 aaKnown RBP eCLIP11.42□□□□□ -0.58
USP38-201ENST00000307017 CT45A10P0DMU9 189 aa11.42□□□□□ -0.58
USP38-201ENST00000307017 CYB561P49447 251 aa11.42□□□□□ -0.58
USP38-201ENST00000307017 IHHQ14623 411 aa11.42□□□□□ -0.58
USP38-201ENST00000307017 ZNF683Q8IZ20 524 aa11.42□□□□□ -0.58
USP38-201ENST00000307017 C19orf43Q9BQ61 176 aa11.42□□□□□ -0.58
USP38-201ENST00000307017 NDUFB11Q9NX14 153 aa11.42□□□□□ -0.58
USP38-201ENST00000307017 MARCH5Q9NX47 278 aa11.42□□□□□ -0.58
USP38-201ENST00000307017 ADAM20O43506 726 aa11.42□□□□□ -0.58
USP38-201ENST00000307017 RAB13P51153 203 aa11.42□□□□□ -0.58
USP38-201ENST00000307017 TRA2BP62995 288 aaKnown RBP11.42□□□□□ -0.58
USP38-201ENST00000307017 CDK5Q00535 292 aa11.42□□□□□ -0.58
USP38-201ENST00000307017 ZNF574Q6ZN55 896 aaPredicted RBP11.42□□□□□ -0.58
USP38-201ENST00000307017 ARHGEF39Q8N4T4 335 aa11.42□□□□□ -0.58
USP38-201ENST00000307017 MS4A6EQ96DS6 147 aa11.42□□□□□ -0.58
USP38-201ENST00000307017 TOLLIPQ9H0E2 274 aa11.42□□□□□ -0.58
USP38-201ENST00000307017 CBR3O75828 277 aa11.42□□□□□ -0.58
USP38-201ENST00000307017 RRADP55042 308 aa11.42□□□□□ -0.58
USP38-201ENST00000307017 ICAM5Q9UMF0 924 aa11.42□□□□□ -0.58
USP38-201ENST00000307017 KIF13AQ9H1H9 1805 aa11.41□□□□□ -0.58
USP38-201ENST00000307017 LOC389332A0A1B0GUA5 103 aa11.41□□□□□ -0.58
USP38-201ENST00000307017 RNASEK-C17orf49H0YIS7 233 aa11.41□□□□□ -0.58
USP38-201ENST00000307017 GIPP09681 153 aaPredicted RBP11.41□□□□□ -0.58
USP38-201ENST00000307017 TBPP20226 339 aa11.41□□□□□ -0.58
USP38-201ENST00000307017 GFERP55789 205 aa11.41□□□□□ -0.58
USP38-201ENST00000307017 CLDN20P56880 219 aa11.41□□□□□ -0.58
USP38-201ENST00000307017 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.41□□□□□ -0.58
USP38-201ENST00000307017 ETV3LQ6ZN32 361 aa11.41□□□□□ -0.58
USP38-201ENST00000307017 ZNF586Q9NXT0 402 aa11.41□□□□□ -0.58
USP38-201ENST00000307017 TECRQ9NZ01 308 aaKnown RBP11.41□□□□□ -0.58
USP38-201ENST00000307017 CD40P25942 277 aa11.41□□□□□ -0.58
USP38-201ENST00000307017 ADGRG7Q96K78 797 aa11.41□□□□□ -0.58
USP38-201ENST00000307017 LINC01565O15544 149 aa11.41□□□□□ -0.58
USP38-201ENST00000307017 ABHD3Q8WU67 409 aa11.41□□□□□ -0.58
USP38-201ENST00000307017 FGF22Q9HCT0 170 aa11.41□□□□□ -0.58
USP38-201ENST00000307017 PCDHGA9Q9Y5G4 932 aaKnown RBP11.41□□□□□ -0.58
USP38-201ENST00000307017 SPAG17Q6Q759 2223 aa11.41□□□□□ -0.58
USP38-201ENST00000307017 PRRT4C9JH25 899 aa11.41□□□□□ -0.58
USP38-201ENST00000307017 H7C2G1 150 aa11.41□□□□□ -0.58
USP38-201ENST00000307017 RAB29O14966 203 aa11.41□□□□□ -0.58
USP38-201ENST00000307017 NEURL1O76050 574 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms