RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 SLC35D3Q5M8T2 416 aa12.99□□□□□ -0.33
PTPN9-201ENST00000306726 CDC20BQ86Y33 519 aa12.99□□□□□ -0.33
PTPN9-201ENST00000306726 FAM24BQ8N5W8 94 aa12.99□□□□□ -0.33
PTPN9-201ENST00000306726 OR5M8Q8NGP6 311 aa12.99□□□□□ -0.33
PTPN9-201ENST00000306726 OR13C8Q8NGS7 320 aa12.99□□□□□ -0.33
PTPN9-201ENST00000306726 OR2A7Q96R45 310 aa12.99□□□□□ -0.33
PTPN9-201ENST00000306726 FN3KRPQ9HA64 309 aa12.99□□□□□ -0.33
PTPN9-201ENST00000306726 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.99□□□□□ -0.33
PTPN9-201ENST00000306726 PATE4P0C8F1 98 aa12.99□□□□□ -0.33
PTPN9-201ENST00000306726 FHL1Q13642 323 aa12.99□□□□□ -0.33
PTPN9-201ENST00000306726 LYSMD4Q5XG99 296 aa12.99□□□□□ -0.33
PTPN9-201ENST00000306726 OR2A2Q6IF42 318 aa12.99□□□□□ -0.33
PTPN9-201ENST00000306726 LYG2Q86SG7 212 aa12.99□□□□□ -0.33
PTPN9-201ENST00000306726 GPR84Q9NQS5 396 aa12.99□□□□□ -0.33
PTPN9-201ENST00000306726 CTSFQ9UBX1 484 aa12.99□□□□□ -0.33
PTPN9-201ENST00000306726 GLS2Q9UI32 602 aa12.99□□□□□ -0.33
PTPN9-201ENST00000306726 R4GN57 208 aa12.99□□□□□ -0.33
PTPN9-201ENST00000306726 SPTA1P02549 2419 aa12.99□□□□□ -0.33
PTPN9-201ENST00000306726 ZNF726A6NNF4 738 aa12.99□□□□□ -0.33
PTPN9-201ENST00000306726 A8MXK9 166 aa12.99□□□□□ -0.33
PTPN9-201ENST00000306726 CBX5P45973 191 aa12.99□□□□□ -0.33
PTPN9-201ENST00000306726 AVPI1Q5T686 147 aa12.99□□□□□ -0.33
PTPN9-201ENST00000306726 PNLDC1Q8NA58 520 aaKnown RBP12.99□□□□□ -0.33
PTPN9-201ENST00000306726 OR6K3Q8NGY3 331 aa12.99□□□□□ -0.33
PTPN9-201ENST00000306726 UBALD1Q8TB05 177 aa12.99□□□□□ -0.33
PTPN9-201ENST00000306726 LCORQ96JN0 433 aaPredicted RBP12.99□□□□□ -0.33
PTPN9-201ENST00000306726 CLCC1Q96S66 551 aa12.99□□□□□ -0.33
PTPN9-201ENST00000306726 TMEM59Q9BXS4 323 aa12.99□□□□□ -0.33
PTPN9-201ENST00000306726 MAGT1Q9H0U3 335 aa12.99□□□□□ -0.33
PTPN9-201ENST00000306726 ZCCHC4Q9H5U6 513 aa12.99□□□□□ -0.33
PTPN9-201ENST00000306726 SPACA1Q9HBV2 294 aa12.99□□□□□ -0.33
PTPN9-201ENST00000306726 GPR27Q9NS67 375 aa12.99□□□□□ -0.33
PTPN9-201ENST00000306726 RASL12Q9NYN1 266 aa12.99□□□□□ -0.33
PTPN9-201ENST00000306726 ZNF175Q9Y473 711 aa12.99□□□□□ -0.33
PTPN9-201ENST00000306726 PCDHGA1Q9Y5H4 931 aa12.99□□□□□ -0.33
PTPN9-201ENST00000306726 A6NLC8 198 aa12.98□□□□□ -0.33
PTPN9-201ENST00000306726 C1orf196B1AJZ1 125 aa12.98□□□□□ -0.33
PTPN9-201ENST00000306726 MASP2O00187 686 aa12.98□□□□□ -0.33
PTPN9-201ENST00000306726 NME1P15531 152 aaKnown RBP12.98□□□□□ -0.33
PTPN9-201ENST00000306726 CD38P28907 300 aa12.98□□□□□ -0.33
PTPN9-201ENST00000306726 HFEQ30201 348 aa12.98□□□□□ -0.33
PTPN9-201ENST00000306726 C9orf152Q5JTZ5 239 aa12.98□□□□□ -0.33
PTPN9-201ENST00000306726 JMJD6Q6NYC1 403 aaPredicted RBP12.98□□□□□ -0.33
PTPN9-201ENST00000306726 PPP1R3BQ86XI6 285 aa12.98□□□□□ -0.33
PTPN9-201ENST00000306726 TMEM105Q8N8V8 129 aa12.98□□□□□ -0.33
PTPN9-201ENST00000306726 OR5L1Q8NGL2 311 aa12.98□□□□□ -0.33
PTPN9-201ENST00000306726 NT5CQ8TCD5 201 aa12.98□□□□□ -0.33
PTPN9-201ENST00000306726 SLC25A21Q9BQT8 299 aaPredicted RBP12.98□□□□□ -0.33
PTPN9-201ENST00000306726 BIN3Q9NQY0 253 aa12.98□□□□□ -0.33
PTPN9-201ENST00000306726 LRRK1Q38SD2 2015 aa12.98□□□□□ -0.33
PTPN9-201ENST00000306726 RALGAPA1Q6GYQ0 2036 aa12.98□□□□□ -0.33
PTPN9-201ENST00000306726 CTDSPLO15194 276 aa12.98□□□□□ -0.33
PTPN9-201ENST00000306726 SFTA3P0C7M3 94 aa12.98□□□□□ -0.33
PTPN9-201ENST00000306726 MPGP29372 298 aa12.98□□□□□ -0.33
PTPN9-201ENST00000306726 RAB5BP61020 215 aa12.98□□□□□ -0.33
PTPN9-201ENST00000306726 TAF9Q16594 264 aa12.98□□□□□ -0.33
PTPN9-201ENST00000306726 DRAM2Q6UX65 266 aa12.98□□□□□ -0.33
PTPN9-201ENST00000306726 ATG4DQ86TL0 474 aaPredicted RBP12.98□□□□□ -0.33
PTPN9-201ENST00000306726 TAF9BQ9HBM6 251 aa12.98□□□□□ -0.33
PTPN9-201ENST00000306726 CUTCQ9NTM9 273 aa12.98□□□□□ -0.33
PTPN9-201ENST00000306726 DOCK10Q96BY6 2186 aa12.98□□□□□ -0.33
PTPN9-201ENST00000306726 PDGFBP01127 241 aaPredicted RBP12.98□□□□□ -0.33
PTPN9-201ENST00000306726 CSTBP04080 98 aaKnown RBP12.98□□□□□ -0.33
PTPN9-201ENST00000306726 TUBG1P23258 451 aa12.98□□□□□ -0.33
PTPN9-201ENST00000306726 TMEM176BQ3YBM2 270 aaPredicted RBP12.98□□□□□ -0.33
PTPN9-201ENST00000306726 PMS2CLQ68D20 193 aa12.98□□□□□ -0.33
PTPN9-201ENST00000306726 FAM213BQ8TBF2 198 aa12.98□□□□□ -0.33
PTPN9-201ENST00000306726 SLAMF6Q96DU3 332 aa12.98□□□□□ -0.33
PTPN9-201ENST00000306726 RRNAD1Q96FB5 475 aaKnown RBP12.98□□□□□ -0.33
PTPN9-201ENST00000306726 SLC25A32Q9H2D1 315 aa12.98□□□□□ -0.33
PTPN9-201ENST00000306726 PIGMQ9H3S5 423 aa12.98□□□□□ -0.33
PTPN9-201ENST00000306726 PLEKHJ1Q9NW61 149 aa12.98□□□□□ -0.33
PTPN9-201ENST00000306726 GDF2Q9UK05 429 aaPredicted RBP12.98□□□□□ -0.33
PTPN9-201ENST00000306726 ABCA1O95477 2261 aa12.97□□□□□ -0.33
PTPN9-201ENST00000306726 HMSDA8MTL9 139 aa12.97□□□□□ -0.33
PTPN9-201ENST00000306726 SIGLEC6O43699 453 aa12.97□□□□□ -0.33
PTPN9-201ENST00000306726 FCGR2AP12318 317 aa12.97□□□□□ -0.33
PTPN9-201ENST00000306726 MDKP21741 143 aaPredicted RBP12.97□□□□□ -0.33
PTPN9-201ENST00000306726 RAB13P51153 203 aa12.97□□□□□ -0.33
PTPN9-201ENST00000306726 HSD17B13Q7Z5P4 300 aaPredicted RBP12.97□□□□□ -0.33
PTPN9-201ENST00000306726 PRR18Q8N4B5 295 aa12.97□□□□□ -0.33
PTPN9-201ENST00000306726 GPX8Q8TED1 209 aa12.97□□□□□ -0.33
PTPN9-201ENST00000306726 RNF141Q8WVD5 230 aa12.97□□□□□ -0.33
PTPN9-201ENST00000306726 C14orf166Q9Y224 244 aaKnown RBP12.97□□□□□ -0.33
PTPN9-201ENST00000306726 RFNGQ9Y644 331 aa12.97□□□□□ -0.33
PTPN9-201ENST00000306726 RNF215Q9Y6U7 377 aa12.97□□□□□ -0.33
PTPN9-201ENST00000306726 GALR2O43603 387 aaPredicted RBP12.97□□□□□ -0.33
PTPN9-201ENST00000306726 OR8U9P0C7N5 309 aa12.97□□□□□ -0.33
PTPN9-201ENST00000306726 EPHA1P21709 976 aa12.97□□□□□ -0.33
PTPN9-201ENST00000306726 UNQ9370/PRO34162Q6UXP9 181 aa12.97□□□□□ -0.33
PTPN9-201ENST00000306726 FAM122BQ7Z309 247 aa12.97□□□□□ -0.33
PTPN9-201ENST00000306726 OR5D14Q8NGL3 314 aa12.97□□□□□ -0.33
PTPN9-201ENST00000306726 OR52N5Q8NH56 324 aa12.97□□□□□ -0.33
PTPN9-201ENST00000306726 MITD1Q8WV92 249 aa12.97□□□□□ -0.33
PTPN9-201ENST00000306726 ZNF285Q96NJ3 590 aa12.97□□□□□ -0.33
PTPN9-201ENST00000306726 HIF3AQ9Y2N7 669 aa12.97□□□□□ -0.33
PTPN9-201ENST00000306726 TRAV36DV7A0A075B6V5 113 aa12.97□□□□□ -0.33
PTPN9-201ENST00000306726 SNAPINO95295 136 aa12.97□□□□□ -0.33
PTPN9-201ENST00000306726 MUC1P15941 1255 aaPredicted RBP12.97□□□□□ -0.33
PTPN9-201ENST00000306726 FAHP16930 419 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms