RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 CLINT1Q14677 625 aa7.53□□□□□ -1.2
PCDHB1-201ENST00000306549 HFEQ30201 348 aa7.53□□□□□ -1.2
PCDHB1-201ENST00000306549 TMEM215Q68D42 235 aa7.53□□□□□ -1.2
PCDHB1-201ENST00000306549 PTOV1Q86YD1 416 aa7.53□□□□□ -1.2
PCDHB1-201ENST00000306549 DNAJC5GQ8N7S2 189 aa7.53□□□□□ -1.2
PCDHB1-201ENST00000306549 CCL4L1Q8NHW4 92 aa7.53□□□□□ -1.2
PCDHB1-201ENST00000306549 TMEM106AQ96A25 262 aa7.53□□□□□ -1.2
PCDHB1-201ENST00000306549 TMPRSS5Q9H3S3 457 aa7.53□□□□□ -1.2
PCDHB1-201ENST00000306549 MMP25Q9NPA2 562 aa7.53□□□□□ -1.2
PCDHB1-201ENST00000306549 LRRK1Q38SD2 2015 aa7.53□□□□□ -1.2
PCDHB1-201ENST00000306549 COX7A2P2O60397 106 aa7.53□□□□□ -1.2
PCDHB1-201ENST00000306549 CEACAM3P40198 252 aa7.53□□□□□ -1.2
PCDHB1-201ENST00000306549 ADAM5Q6NVV9 412 aa7.53□□□□□ -1.2
PCDHB1-201ENST00000306549 VASH2Q86V25 355 aa7.53□□□□□ -1.2
PCDHB1-201ENST00000306549 RNF141Q8WVD5 230 aa7.53□□□□□ -1.2
PCDHB1-201ENST00000306549 MACROD1Q9BQ69 325 aa7.53□□□□□ -1.2
PCDHB1-201ENST00000306549 SLC25A21Q9BQT8 299 aaPredicted RBP7.53□□□□□ -1.2
PCDHB1-201ENST00000306549 ACER3Q9NUN7 267 aa7.53□□□□□ -1.2
PCDHB1-201ENST00000306549 ZNF17P17021 662 aa7.52□□□□□ -1.2
PCDHB1-201ENST00000306549 ADRA2CP18825 462 aa7.52□□□□□ -1.2
PCDHB1-201ENST00000306549 RAB1AP62820 205 aa7.52□□□□□ -1.2
PCDHB1-201ENST00000306549 EBPQ15125 230 aaKnown RBP7.52□□□□□ -1.2
PCDHB1-201ENST00000306549 STEAP1BQ6NZ63 245 aa7.52□□□□□ -1.2
PCDHB1-201ENST00000306549 MOB3BQ86TA1 216 aa7.52□□□□□ -1.2
PCDHB1-201ENST00000306549 PINX1Q96BK5 328 aaKnown RBP7.52□□□□□ -1.2
PCDHB1-201ENST00000306549 EMC7Q9NPA0 242 aa7.52□□□□□ -1.2
PCDHB1-201ENST00000306549 IGHV5-10-1A0A0J9YXX1 117 aa7.52□□□□□ -1.21
PCDHB1-201ENST00000306549 FAM183AA6NL82 134 aa7.52□□□□□ -1.21
PCDHB1-201ENST00000306549 CLDN24A6NM45 220 aa7.52□□□□□ -1.21
PCDHB1-201ENST00000306549 ALG1L2C9J202 215 aa7.52□□□□□ -1.21
PCDHB1-201ENST00000306549 OR2J3O76001 311 aa7.52□□□□□ -1.21
PCDHB1-201ENST00000306549 PTTG1IPP53801 180 aa7.52□□□□□ -1.21
PCDHB1-201ENST00000306549 ETFRF1Q6IPR1 90 aa7.52□□□□□ -1.21
PCDHB1-201ENST00000306549 CLDN22Q8N7P3 220 aa7.52□□□□□ -1.21
PCDHB1-201ENST00000306549 WDR31Q8NA23 367 aa7.52□□□□□ -1.21
PCDHB1-201ENST00000306549 DEFB108BQ8NET1 73 aa7.52□□□□□ -1.21
PCDHB1-201ENST00000306549 SLCO1C1Q9NYB5 712 aa7.52□□□□□ -1.21
PCDHB1-201ENST00000306549 A3GALT2U3KPV4 340 aa7.52□□□□□ -1.21
PCDHB1-201ENST00000306549 P2RY10O00398 339 aa7.52□□□□□ -1.21
PCDHB1-201ENST00000306549 FGF17O60258 216 aa7.52□□□□□ -1.21
PCDHB1-201ENST00000306549 UPK1BO75841 260 aa7.52□□□□□ -1.21
PCDHB1-201ENST00000306549 YRDCQ86U90 279 aaKnown RBP7.52□□□□□ -1.21
PCDHB1-201ENST00000306549 POM121L2Q96KW2 1035 aa7.52□□□□□ -1.21
PCDHB1-201ENST00000306549 SUCNR1Q9BXA5 334 aa7.52□□□□□ -1.21
PCDHB1-201ENST00000306549 A0A1W2PQF6 199 aa7.52□□□□□ -1.21
PCDHB1-201ENST00000306549 ACOD1A6NK06 481 aa7.52□□□□□ -1.21
PCDHB1-201ENST00000306549 OR7C2O60412 319 aa7.52□□□□□ -1.21
PCDHB1-201ENST00000306549 ADAM11O75078 769 aa7.52□□□□□ -1.21
PCDHB1-201ENST00000306549 ALKBH1Q13686 389 aaKnown RBP7.52□□□□□ -1.21
PCDHB1-201ENST00000306549 TBCEQ15813 527 aaPredicted RBP7.52□□□□□ -1.21
PCDHB1-201ENST00000306549 DGAT2L7PQ6IED9 249 aa7.52□□□□□ -1.21
PCDHB1-201ENST00000306549 FOXD3Q9UJU5 478 aaPredicted RBP7.52□□□□□ -1.21
PCDHB1-201ENST00000306549 TRAPPC4Q9Y296 219 aa7.52□□□□□ -1.21
PCDHB1-201ENST00000306549 SULT1C4O75897 302 aa7.52□□□□□ -1.21
PCDHB1-201ENST00000306549 C3orf30Q96M34 536 aa7.52□□□□□ -1.21
PCDHB1-201ENST00000306549 ACTR3CQ9C0K3 210 aaPredicted RBP7.52□□□□□ -1.21
PCDHB1-201ENST00000306549 IGHV5-51A0A0C4DH38 117 aa7.52□□□□□ -1.21
PCDHB1-201ENST00000306549 C5orf49A4QMS7 147 aa7.52□□□□□ -1.21
PCDHB1-201ENST00000306549 TMEM200CA6NKL6 621 aa7.52□□□□□ -1.21
PCDHB1-201ENST00000306549 GABRPO00591 440 aa7.52□□□□□ -1.21
PCDHB1-201ENST00000306549 FTH1P19P0C7X4 201 aa7.52□□□□□ -1.21
PCDHB1-201ENST00000306549 FGF5P12034 268 aa7.52□□□□□ -1.21
PCDHB1-201ENST00000306549 MARCH3Q86UD3 253 aa7.52□□□□□ -1.21
PCDHB1-201ENST00000306549 RND1Q92730 232 aa7.52□□□□□ -1.21
PCDHB1-201ENST00000306549 PIGTQ969N2 578 aa7.52□□□□□ -1.21
PCDHB1-201ENST00000306549 LIN28AQ9H9Z2 209 aaKnown RBP7.52□□□□□ -1.21
PCDHB1-201ENST00000306549 A0A1B0GUH1 482 aa7.52□□□□□ -1.21
PCDHB1-201ENST00000306549 MS4A18H0YCH9 400 aa7.52□□□□□ -1.21
PCDHB1-201ENST00000306549 PPIHO43447 177 aaKnown RBP7.52□□□□□ -1.21
PCDHB1-201ENST00000306549 CSRP1P21291 193 aaKnown RBP7.52□□□□□ -1.21
PCDHB1-201ENST00000306549 ARRB2P32121 409 aa7.52□□□□□ -1.21
PCDHB1-201ENST00000306549 MS4A18Q3C1V0 323 aa7.52□□□□□ -1.21
PCDHB1-201ENST00000306549 ZNF691Q5VV52 312 aa7.52□□□□□ -1.21
PCDHB1-201ENST00000306549 GDF7Q7Z4P5 450 aa7.52□□□□□ -1.21
PCDHB1-201ENST00000306549 RETREG3Q86VR2 466 aa7.52□□□□□ -1.21
PCDHB1-201ENST00000306549 OR10P1Q8NGE3 313 aa7.52□□□□□ -1.21
PCDHB1-201ENST00000306549 WDR61Q9GZS3 305 aaKnown RBP7.52□□□□□ -1.21
PCDHB1-201ENST00000306549 MED9Q9NWA0 146 aa7.52□□□□□ -1.21
PCDHB1-201ENST00000306549 MAGEB4O15481 346 aaPredicted RBP7.51□□□□□ -1.21
PCDHB1-201ENST00000306549 SCGB1C2P0DMR2 95 aa7.51□□□□□ -1.21
PCDHB1-201ENST00000306549 IAH1Q2TAA2 248 aaPredicted RBP7.51□□□□□ -1.21
PCDHB1-201ENST00000306549 PHLDA2Q53GA4 152 aa7.51□□□□□ -1.21
PCDHB1-201ENST00000306549 DCXRQ7Z4W1 244 aa7.51□□□□□ -1.21
PCDHB1-201ENST00000306549 OR51F2Q8NH61 342 aa7.51□□□□□ -1.21
PCDHB1-201ENST00000306549 APOBEC3DQ96AK3 386 aaPredicted RBP7.51□□□□□ -1.21
PCDHB1-201ENST00000306549 SERGEFQ9UGK8 458 aa7.51□□□□□ -1.21
PCDHB1-201ENST00000306549 AMDHD2Q9Y303 409 aa7.51□□□□□ -1.21
PCDHB1-201ENST00000306549 NKX2-1P43699 371 aaPredicted RBP7.51□□□□□ -1.21
PCDHB1-201ENST00000306549 HOXC5Q00444 222 aa7.51□□□□□ -1.21
PCDHB1-201ENST00000306549 HIST2H3AQ71DI3 136 aa7.51□□□□□ -1.21
PCDHB1-201ENST00000306549 OR4F15Q8NGB8 312 aa7.51□□□□□ -1.21
PCDHB1-201ENST00000306549 TMEM56Q96MV1 263 aa7.51□□□□□ -1.21
PCDHB1-201ENST00000306549 SARGQ9BW04 601 aa7.51□□□□□ -1.21
PCDHB1-201ENST00000306549 WDR1O75083 606 aa7.51□□□□□ -1.21
PCDHB1-201ENST00000306549 NKX2-2O95096 273 aa7.51□□□□□ -1.21
PCDHB1-201ENST00000306549 Q56UQ5 140 aa7.51□□□□□ -1.21
PCDHB1-201ENST00000306549 LYRM7Q5U5X0 104 aa7.51□□□□□ -1.21
PCDHB1-201ENST00000306549 LINC00346Q8IVM7 164 aa7.51□□□□□ -1.21
PCDHB1-201ENST00000306549 C1QTNF6Q9BXI9 259 aa7.51□□□□□ -1.21
PCDHB1-201ENST00000306549 TMEM231Q9H6L2 316 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms