RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 PSENENQ9NZ42 101 aa11.58□□□□□ -0.56
COL3A1-201ENST00000304636 CCDC187A0A096LP49 1063 aa11.57□□□□□ -0.56
COL3A1-201ENST00000304636 NPIPB8E9PQR5 432 aa11.57□□□□□ -0.56
COL3A1-201ENST00000304636 GPR31O00270 319 aa11.57□□□□□ -0.56
COL3A1-201ENST00000304636 THBS4P35443 961 aa11.57□□□□□ -0.56
COL3A1-201ENST00000304636 CXCL12P48061 93 aa11.57□□□□□ -0.56
COL3A1-201ENST00000304636 MVB12AQ96EY5 273 aa11.57□□□□□ -0.56
COL3A1-201ENST00000304636 UTP23Q9BRU9 249 aaKnown RBP11.57□□□□□ -0.56
COL3A1-201ENST00000304636 MTCH1Q9NZJ7 389 aa11.57□□□□□ -0.56
COL3A1-201ENST00000304636 SLC17A4Q9Y2C5 497 aa11.57□□□□□ -0.56
COL3A1-201ENST00000304636 GP1BAP07359 652 aa11.57□□□□□ -0.56
COL3A1-201ENST00000304636 FZD2Q14332 565 aa11.57□□□□□ -0.56
COL3A1-201ENST00000304636 PRSS54Q6PEW0 395 aa11.57□□□□□ -0.56
COL3A1-201ENST00000304636 PATE1Q8WXA2 126 aa11.57□□□□□ -0.56
COL3A1-201ENST00000304636 KTI12Q96EK9 354 aaPredicted RBP11.57□□□□□ -0.56
COL3A1-201ENST00000304636 ZNF764Q96H86 408 aaPredicted RBP11.57□□□□□ -0.56
COL3A1-201ENST00000304636 REEP6Q96HR9 211 aa11.57□□□□□ -0.56
COL3A1-201ENST00000304636 MAGT1Q9H0U3 335 aa11.57□□□□□ -0.56
COL3A1-201ENST00000304636 SIRT3Q9NTG7 399 aaPredicted RBP11.57□□□□□ -0.56
COL3A1-201ENST00000304636 FAM221AA4D161 298 aa11.57□□□□□ -0.56
COL3A1-201ENST00000304636 FFAR1O14842 300 aa11.57□□□□□ -0.56
COL3A1-201ENST00000304636 ZIC2O95409 532 aaPredicted RBP11.57□□□□□ -0.56
COL3A1-201ENST00000304636 CT45A6P0DMU7 189 aa11.57□□□□□ -0.56
COL3A1-201ENST00000304636 CT45A5P0DMU8 189 aa11.57□□□□□ -0.56
COL3A1-201ENST00000304636 CT45A7P0DMV0 189 aa11.57□□□□□ -0.56
COL3A1-201ENST00000304636 CT45A8P0DMV1 189 aa11.57□□□□□ -0.56
COL3A1-201ENST00000304636 CT45A9P0DMV2 189 aa11.57□□□□□ -0.56
COL3A1-201ENST00000304636 OR1D5P58170 312 aa11.57□□□□□ -0.56
COL3A1-201ENST00000304636 CT45A2Q5DJT8 189 aa11.57□□□□□ -0.56
COL3A1-201ENST00000304636 CT45A1Q5HYN5 189 aa11.57□□□□□ -0.56
COL3A1-201ENST00000304636 CT45A3Q8NHU0 189 aa11.57□□□□□ -0.56
COL3A1-201ENST00000304636 GPR137Q96N19 417 aa11.57□□□□□ -0.56
COL3A1-201ENST00000304636 SLC35B3Q9H1N7 401 aa11.57□□□□□ -0.56
COL3A1-201ENST00000304636 LAMP3Q9UQV4 416 aa11.57□□□□□ -0.56
COL3A1-201ENST00000304636 KIF13BQ9NQT8 1826 aa11.57□□□□□ -0.56
COL3A1-201ENST00000304636 A0A1W2PNR3 127 aa11.57□□□□□ -0.56
COL3A1-201ENST00000304636 OGG1O15527 345 aa11.57□□□□□ -0.56
COL3A1-201ENST00000304636 PLRG1O43660 514 aaKnown RBP11.57□□□□□ -0.56
COL3A1-201ENST00000304636 OR2J2O76002 312 aa11.57□□□□□ -0.56
COL3A1-201ENST00000304636 GZMMP51124 257 aa11.57□□□□□ -0.56
COL3A1-201ENST00000304636 TBC1D28Q2M2D7 210 aa11.57□□□□□ -0.56
COL3A1-201ENST00000304636 PLA1AQ53H76 456 aa11.57□□□□□ -0.56
COL3A1-201ENST00000304636 FAHD2BQ6P2I3 314 aaPredicted RBP11.57□□□□□ -0.56
COL3A1-201ENST00000304636 ZNF687Q8N1G0 1237 aa11.57□□□□□ -0.56
COL3A1-201ENST00000304636 OR11L1Q8NGX0 322 aa11.57□□□□□ -0.56
COL3A1-201ENST00000304636 RHBDD1Q8TEB9 315 aa11.57□□□□□ -0.56
COL3A1-201ENST00000304636 PP6455Q8WZ26 134 aa11.57□□□□□ -0.56
COL3A1-201ENST00000304636 SAT2Q96F10 170 aaPredicted RBP11.57□□□□□ -0.56
COL3A1-201ENST00000304636 FAHD2AQ96GK7 314 aa11.57□□□□□ -0.56
COL3A1-201ENST00000304636 RIMS4Q9H426 269 aaPredicted RBP11.57□□□□□ -0.56
COL3A1-201ENST00000304636 PPP1R3CQ9UQK1 317 aa11.57□□□□□ -0.56
COL3A1-201ENST00000304636 A0A1W2PPQ1 181 aa11.56□□□□□ -0.56
COL3A1-201ENST00000304636 TMEM218A2RU14 115 aa11.56□□□□□ -0.56
COL3A1-201ENST00000304636 SDHBP21912 280 aa11.56□□□□□ -0.56
COL3A1-201ENST00000304636 RNF151Q2KHN1 245 aa11.56□□□□□ -0.56
COL3A1-201ENST00000304636 OR52N4Q8NGI2 321 aa11.56□□□□□ -0.56
COL3A1-201ENST00000304636 SLC39A7Q92504 469 aa11.56□□□□□ -0.56
COL3A1-201ENST00000304636 ZG16BQ96DA0 208 aa11.56□□□□□ -0.56
COL3A1-201ENST00000304636 CIB3Q96Q77 187 aaPredicted RBP11.56□□□□□ -0.56
COL3A1-201ENST00000304636 FAM234AQ9H0X4 552 aa11.56□□□□□ -0.56
COL3A1-201ENST00000304636 CRLF2Q9HC73 371 aa11.56□□□□□ -0.56
COL3A1-201ENST00000304636 DNAJB12Q9NXW2 375 aaKnown RBP11.56□□□□□ -0.56
COL3A1-201ENST00000304636 GON4LQ3T8J9 2241 aa11.56□□□□□ -0.56
COL3A1-201ENST00000304636 CDC42EP2O14613 210 aa11.56□□□□□ -0.56
COL3A1-201ENST00000304636 NOVA1P51513 510 aaKnown RBP11.56□□□□□ -0.56
COL3A1-201ENST00000304636 ZNF528Q3MIS6 628 aa11.56□□□□□ -0.56
COL3A1-201ENST00000304636 ABI3BPQ7Z7G0 1075 aa11.56□□□□□ -0.56
COL3A1-201ENST00000304636 OR10D4PQ8NGN7 298 aa11.56□□□□□ -0.56
COL3A1-201ENST00000304636 SLC35D1Q9NTN3 355 aa11.56□□□□□ -0.56
COL3A1-201ENST00000304636 PISDQ9UG56 409 aa11.56□□□□□ -0.56
COL3A1-201ENST00000304636 ELF5Q9UKW6 265 aaPredicted RBP11.56□□□□□ -0.56
COL3A1-201ENST00000304636 ZNF732B4DXR9 585 aa11.56□□□□□ -0.56
COL3A1-201ENST00000304636 EDN3P14138 238 aa11.56□□□□□ -0.56
COL3A1-201ENST00000304636 FABP4P15090 132 aa11.56□□□□□ -0.56
COL3A1-201ENST00000304636 CASP6P55212 293 aa11.56□□□□□ -0.56
COL3A1-201ENST00000304636 SUMO3P55854 103 aaPredicted RBP11.56□□□□□ -0.56
COL3A1-201ENST00000304636 NKAIN1Q4KMZ8 207 aa11.56□□□□□ -0.56
COL3A1-201ENST00000304636 Q7L0L9 218 aa11.56□□□□□ -0.56
COL3A1-201ENST00000304636 OSR2Q8N2R0 312 aa11.56□□□□□ -0.56
COL3A1-201ENST00000304636 KDF1Q8NAX2 398 aaPredicted RBP11.56□□□□□ -0.56
COL3A1-201ENST00000304636 CCL4L1Q8NHW4 92 aa11.56□□□□□ -0.56
COL3A1-201ENST00000304636 CORO2AQ92828 525 aa11.56□□□□□ -0.56
COL3A1-201ENST00000304636 ST3GAL6Q9Y274 331 aa11.56□□□□□ -0.56
COL3A1-201ENST00000304636 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.56□□□□□ -0.56
COL3A1-201ENST00000304636 HIST1H1DP16402 221 aaKnown RBP11.56□□□□□ -0.56
COL3A1-201ENST00000304636 EN2P19622 333 aaPredicted RBP11.56□□□□□ -0.56
COL3A1-201ENST00000304636 PAX6P26367 422 aa11.56□□□□□ -0.56
COL3A1-201ENST00000304636 CD27P26842 260 aa11.56□□□□□ -0.56
COL3A1-201ENST00000304636 INPP5JQ15735 1006 aaPredicted RBP11.56□□□□□ -0.56
COL3A1-201ENST00000304636 PRAMEF5Q5TYX0 476 aa11.56□□□□□ -0.56
COL3A1-201ENST00000304636 PRAMEF6Q5VXH4 476 aa11.56□□□□□ -0.56
COL3A1-201ENST00000304636 SMIM15Q7Z3B0 74 aa11.56□□□□□ -0.56
COL3A1-201ENST00000304636 BATF2Q8N1L9 274 aa11.56□□□□□ -0.56
COL3A1-201ENST00000304636 CHST6Q9GZX3 395 aa11.56□□□□□ -0.56
COL3A1-201ENST00000304636 UQCC1Q9NVA1 299 aa11.56□□□□□ -0.56
COL3A1-201ENST00000304636 PAPPAQ13219 1627 aa11.56□□□□□ -0.56
COL3A1-201ENST00000304636 YKT6O15498 198 aa11.55□□□□□ -0.56
COL3A1-201ENST00000304636 SEMG1P04279 462 aa11.55□□□□□ -0.56
COL3A1-201ENST00000304636 SPP1P10451 314 aa11.55□□□□□ -0.56
COL3A1-201ENST00000304636 IAPPP10997 89 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms