RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 ZNF574Q6ZN55 896 aaPredicted RBP6.92□□□□□ -1.3
SF3B3-201ENST00000302516 PTOV1Q86YD1 416 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 RPUSD4Q96CM3 377 aaKnown RBP6.92□□□□□ -1.3
SF3B3-201ENST00000302516 WDR89Q96FK6 387 aaPredicted RBP6.92□□□□□ -1.3
SF3B3-201ENST00000302516 CTDSP1Q9GZU7 261 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 ZNF385DQ9H6B1 395 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 CALHM2Q9HA72 323 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 UBR3Q6ZT12 1888 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 A0A0A6YYD5 115 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 A0A1W2PPQ1 181 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 GSTZ1O43708 216 aaPredicted RBP6.92□□□□□ -1.3
SF3B3-201ENST00000302516 TBX19O60806 448 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 AKR7A3O95154 331 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 OR5H8P0DN80 308 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 GALR1P47211 349 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 PNLIPRP2P54317 469 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 LGALS4P56470 323 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 TCTN3Q6NUS6 607 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 HSD17B13Q7Z5P4 300 aaPredicted RBP6.92□□□□□ -1.3
SF3B3-201ENST00000302516 PELI1Q96FA3 418 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 TEX101Q9BY14 249 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 TPSD1Q9BZJ3 242 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 PLA2G12AQ9BZM1 189 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 HS3ST1O14792 307 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 ARPC3O15145 178 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 F2RP25116 425 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 CDKN3Q16667 212 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 MARVELD1Q9BSK0 173 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 NMES1Q9C002 83 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 AUNIPQ9H7T9 357 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 GNB4Q9HAV0 340 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 ARL2-SNX15V9GYD0 113 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 PMS2P1A4D2B8 440 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 PLPP2O43688 288 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 TXNDC12O95881 172 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 FABP9Q0Z7S8 132 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 ERV3-1Q14264 604 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 ZNF355PQ9NSJ1 428 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 IL20Q9NYY1 176 aa6.92□□□□□ -1.3
SF3B3-201ENST00000302516 GDF2Q9UK05 429 aaPredicted RBP6.92□□□□□ -1.3
SF3B3-201ENST00000302516 ZNF346Q9UL40 294 aaKnown RBP6.92□□□□□ -1.3
SF3B3-201ENST00000302516 DCTDP32321 178 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 CAPZBP47756 277 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 EDDM3BP56851 147 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 FAM53BQ14153 422 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 SPANXN5Q5MJ07 72 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 FBXO46Q6PJ61 603 aaPredicted RBP6.91□□□□□ -1.3
SF3B3-201ENST00000302516 TAS1R1Q7RTX1 841 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 TMEM130Q8N3G9 435 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 NOXO1Q8NFA2 376 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 NUDCD2Q8WVJ2 157 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 PTDSS2Q9BVG9 487 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 RCL1Q9Y2P8 373 aaKnown RBP6.91□□□□□ -1.3
SF3B3-201ENST00000302516 A0A0B4J203 849 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 AKR7A2O43488 359 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 OR7C2O60412 319 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 PRKRAO75569 313 aaKnown RBP6.91□□□□□ -1.3
SF3B3-201ENST00000302516 NTF3P20783 257 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 SULT1A2P50226 295 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 MIDNQ504T8 468 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 UBE2FQ969M7 185 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 GALMQ96C23 342 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 ANAPC16Q96DE5 110 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 NOL4LQ96MY1 436 aaPredicted RBP6.91□□□□□ -1.3
SF3B3-201ENST00000302516 TRIB1Q96RU8 372 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 FAM103A1Q9BTL3 118 aaKnown RBP6.91□□□□□ -1.3
SF3B3-201ENST00000302516 COMMD5Q9GZQ3 224 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 FKBP11Q9NYL4 201 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 CLEC18AA5D8T8 446 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 M0R143 59 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 COX7A2P2O60397 106 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 CA3P07451 260 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 PCBP4P57723 403 aaKnown RBP6.91□□□□□ -1.3
SF3B3-201ENST00000302516 ERVFC1-1P60608 527 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 TMEM88Q6PEY1 159 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 CLEC18CQ8NCF0 446 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 BCL7CQ8WUZ0 217 aaPredicted RBP6.91□□□□□ -1.3
SF3B3-201ENST00000302516 SPSB1Q96BD6 273 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 GPR173Q9NS66 373 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 EXOGQ9Y2C4 368 aaKnown RBP6.91□□□□□ -1.3
SF3B3-201ENST00000302516 FITM1A5D6W6 292 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 ANKUB1A6NFN9 424 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 CD27P26842 260 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 CRYBB2P43320 205 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 ADPRHP54922 357 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 FUT7Q11130 342 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 SHBQ15464 509 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 DPPA3Q6W0C5 159 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 NECAP1Q8NC96 275 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 RTN4IP1Q8WWV3 396 aaPredicted RBP6.91□□□□□ -1.3
SF3B3-201ENST00000302516 ERGIC1Q969X5 290 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 ASH2LQ9UBL3 628 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 UBE2L5PA0A1B0GUS4 154 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 QDPRP09417 244 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 MEOX2P50222 304 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 NTHL1P78549 312 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 MARCH1Q8TCQ1 289 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 RXFP4Q8TDU9 374 aa6.91□□□□□ -1.3
SF3B3-201ENST00000302516 ZC3HAV1LQ96H79 300 aaKnown RBP6.91□□□□□ -1.3
SF3B3-201ENST00000302516 FAM234AQ9H0X4 552 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms