RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 FOXF2Q12947 444 aa13.65□□□□□ -0.22
HERPUD1-201ENST00000300302 HACD4Q5VWC8 232 aa13.65□□□□□ -0.22
HERPUD1-201ENST00000300302 COLCA1Q6ZS62 124 aa13.65□□□□□ -0.22
HERPUD1-201ENST00000300302 OR5AS1Q8N127 324 aa13.65□□□□□ -0.22
HERPUD1-201ENST00000300302 CISD2Q8N5K1 135 aaKnown RBP13.65□□□□□ -0.22
HERPUD1-201ENST00000300302 C1orf162Q8NEQ5 155 aaPredicted RBP13.65□□□□□ -0.22
HERPUD1-201ENST00000300302 DIABLOQ9NR28 239 aa13.65□□□□□ -0.22
HERPUD1-201ENST00000300302 MGAQ8IWI9 3026 aa13.65□□□□□ -0.22
HERPUD1-201ENST00000300302 ANKRD11Q6UB99 2663 aaPredicted RBP13.65□□□□□ -0.22
HERPUD1-201ENST00000300302 TMEM272A0A1B0GTI8 110 aa13.65□□□□□ -0.22
HERPUD1-201ENST00000300302 RAD51DO75771 328 aa13.65□□□□□ -0.22
HERPUD1-201ENST00000300302 TNFSF13O75888 250 aa13.65□□□□□ -0.22
HERPUD1-201ENST00000300302 TMIGD3P0DMS9 266 aaPredicted RBP13.65□□□□□ -0.22
HERPUD1-201ENST00000300302 CDK2P24941 298 aa13.65□□□□□ -0.22
HERPUD1-201ENST00000300302 HOXC12P31275 282 aa13.65□□□□□ -0.22
HERPUD1-201ENST00000300302 TIMP3P35625 211 aa13.65□□□□□ -0.22
HERPUD1-201ENST00000300302 RTL6Q6ICC9 239 aa13.65□□□□□ -0.22
HERPUD1-201ENST00000300302 SEM1Q6ZVN7 128 aa13.65□□□□□ -0.22
HERPUD1-201ENST00000300302 OR4D6Q8NGJ1 314 aa13.65□□□□□ -0.22
HERPUD1-201ENST00000300302 SPSB4Q96A44 273 aa13.65□□□□□ -0.22
HERPUD1-201ENST00000300302 PTX4Q96A99 478 aa13.65□□□□□ -0.22
HERPUD1-201ENST00000300302 APOBEC3DQ96AK3 386 aaPredicted RBP13.65□□□□□ -0.22
HERPUD1-201ENST00000300302 POM121L2Q96KW2 1035 aa13.65□□□□□ -0.22
HERPUD1-201ENST00000300302 DOCK7Q96N67 2140 aa13.65□□□□□ -0.22
HERPUD1-201ENST00000300302 NEK6Q9HC98 313 aa13.65□□□□□ -0.22
HERPUD1-201ENST00000300302 LINC00854A0A1B0GVQ3 168 aa13.64□□□□□ -0.23
HERPUD1-201ENST00000300302 LYZL6O75951 148 aa13.64□□□□□ -0.23
HERPUD1-201ENST00000300302 BPNT1O95861 308 aa13.64□□□□□ -0.23
HERPUD1-201ENST00000300302 SERPINA5P05154 406 aa13.64□□□□□ -0.23
HERPUD1-201ENST00000300302 COX5AP20674 150 aa13.64□□□□□ -0.23
HERPUD1-201ENST00000300302 MNDAP41218 407 aa13.64□□□□□ -0.23
HERPUD1-201ENST00000300302 MALLQ13021 153 aa13.64□□□□□ -0.23
HERPUD1-201ENST00000300302 GABRA6Q16445 453 aa13.64□□□□□ -0.23
HERPUD1-201ENST00000300302 LINC00303Q3SY05 128 aa13.64□□□□□ -0.23
HERPUD1-201ENST00000300302 MDP1Q86V88 176 aa13.64□□□□□ -0.23
HERPUD1-201ENST00000300302 IZUMO1Q8IYV9 350 aa13.64□□□□□ -0.23
HERPUD1-201ENST00000300302 PNLDC1Q8NA58 520 aaKnown RBP13.64□□□□□ -0.23
HERPUD1-201ENST00000300302 STARD4Q96DR4 205 aa13.64□□□□□ -0.23
HERPUD1-201ENST00000300302 BOD1Q96IK1 185 aa13.64□□□□□ -0.23
HERPUD1-201ENST00000300302 NKX3-1Q99801 234 aaPredicted RBP13.64□□□□□ -0.23
HERPUD1-201ENST00000300302 SLC22A4Q9H015 551 aa13.64□□□□□ -0.23
HERPUD1-201ENST00000300302 FAM215AQ9Y5M1 114 aa13.64□□□□□ -0.23
HERPUD1-201ENST00000300302 SPENQ96T58 3664 aaKnown RBP13.64□□□□□ -0.23
HERPUD1-201ENST00000300302 hCG_38984A0A1B0GV85 526 aa13.63□□□□□ -0.23
HERPUD1-201ENST00000300302 PRRG2O14669 202 aa13.63□□□□□ -0.23
HERPUD1-201ENST00000300302 EEF1E1O43324 174 aaKnown RBP13.63□□□□□ -0.23
HERPUD1-201ENST00000300302 XRCC3O43542 346 aa13.63□□□□□ -0.23
HERPUD1-201ENST00000300302 GSTZ1O43708 216 aaPredicted RBP13.63□□□□□ -0.23
HERPUD1-201ENST00000300302 CTAG2O75638 210 aa13.63□□□□□ -0.23
HERPUD1-201ENST00000300302 EDN3P14138 238 aa13.63□□□□□ -0.23
HERPUD1-201ENST00000300302 GSK3AP49840 483 aa13.63□□□□□ -0.23
HERPUD1-201ENST00000300302 TDGF1P3P51864 188 aa13.63□□□□□ -0.23
HERPUD1-201ENST00000300302 MRPS10P82664 201 aaKnown RBP13.63□□□□□ -0.23
HERPUD1-201ENST00000300302 FAM3AP98173 230 aa13.63□□□□□ -0.23
HERPUD1-201ENST00000300302 ZNF92Q03936 586 aa13.63□□□□□ -0.23
HERPUD1-201ENST00000300302 ZNF57Q68EA5 555 aaPredicted RBP13.63□□□□□ -0.23
HERPUD1-201ENST00000300302 AWAT2Q6E213 333 aa13.63□□□□□ -0.23
HERPUD1-201ENST00000300302 MZT2BQ6NZ67 158 aa13.63□□□□□ -0.23
HERPUD1-201ENST00000300302 BEND4Q6ZU67 534 aa13.63□□□□□ -0.23
HERPUD1-201ENST00000300302 GDPD3Q7L5L3 318 aa13.63□□□□□ -0.23
HERPUD1-201ENST00000300302 ZNF584Q8IVC4 421 aa13.63□□□□□ -0.23
HERPUD1-201ENST00000300302 GABRG1Q8N1C3 465 aa13.63□□□□□ -0.23
HERPUD1-201ENST00000300302 ITFG2Q969R8 447 aa13.63□□□□□ -0.23
HERPUD1-201ENST00000300302 GPER1Q99527 375 aa13.63□□□□□ -0.23
HERPUD1-201ENST00000300302 ATG5Q9H1Y0 275 aa13.63□□□□□ -0.23
HERPUD1-201ENST00000300302 RHBDD3Q9Y3P4 386 aa13.63□□□□□ -0.23
HERPUD1-201ENST00000300302 PRRC2CQ9Y520 2896 aaKnown RBP13.63□□□□□ -0.23
HERPUD1-201ENST00000300302 IGKV1-9A0A0C4DH69 117 aa13.63□□□□□ -0.23
HERPUD1-201ENST00000300302 PFDN1O60925 122 aa13.63□□□□□ -0.23
HERPUD1-201ENST00000300302 CCL2P13500 99 aa13.63□□□□□ -0.23
HERPUD1-201ENST00000300302 PRF1P14222 555 aa13.63□□□□□ -0.23
HERPUD1-201ENST00000300302 RAB6AP20340 208 aa13.63□□□□□ -0.23
HERPUD1-201ENST00000300302 ACKR3P25106 362 aa13.63□□□□□ -0.23
HERPUD1-201ENST00000300302 EFNB2P52799 333 aa13.63□□□□□ -0.23
HERPUD1-201ENST00000300302 PLA2G7Q13093 441 aa13.63□□□□□ -0.23
HERPUD1-201ENST00000300302 P2RY6Q15077 328 aa13.63□□□□□ -0.23
HERPUD1-201ENST00000300302 OR8B8Q15620 311 aa13.63□□□□□ -0.23
HERPUD1-201ENST00000300302 UBE2V2Q15819 145 aa13.63□□□□□ -0.23
HERPUD1-201ENST00000300302 ZBTB37Q5TC79 503 aa13.63□□□□□ -0.23
HERPUD1-201ENST00000300302 ANGPTL5Q86XS5 388 aa13.63□□□□□ -0.23
HERPUD1-201ENST00000300302 SLC30A7Q8NEW0 376 aa13.63□□□□□ -0.23
HERPUD1-201ENST00000300302 SMIM4Q8WVI0 70 aa13.63□□□□□ -0.23
HERPUD1-201ENST00000300302 TRIM63Q969Q1 353 aa13.63□□□□□ -0.23
HERPUD1-201ENST00000300302 CPNE2Q96FN4 548 aaPredicted RBP13.63□□□□□ -0.23
HERPUD1-201ENST00000300302 TP63Q9H3D4 680 aaPredicted RBP13.63□□□□□ -0.23
HERPUD1-201ENST00000300302 RAB22AQ9UL26 194 aa13.63□□□□□ -0.23
HERPUD1-201ENST00000300302 GTF3C1Q12789 2109 aa13.62□□□□□ -0.23
HERPUD1-201ENST00000300302 GGT3PA6NGU5 568 aa13.62□□□□□ -0.23
HERPUD1-201ENST00000300302 LDLRAD4O15165 306 aa13.62□□□□□ -0.23
HERPUD1-201ENST00000300302 TOXO94900 526 aa13.62□□□□□ -0.23
HERPUD1-201ENST00000300302 CGAP01215 116 aa13.62□□□□□ -0.23
HERPUD1-201ENST00000300302 PTH2RP49190 550 aa13.62□□□□□ -0.23
HERPUD1-201ENST00000300302 TAS2R20P59543 309 aa13.62□□□□□ -0.23
HERPUD1-201ENST00000300302 MRPL49Q13405 166 aaKnown RBP13.62□□□□□ -0.23
HERPUD1-201ENST00000300302 CNN3Q15417 329 aaKnown RBP13.62□□□□□ -0.23
HERPUD1-201ENST00000300302 KISS1Q15726 138 aa13.62□□□□□ -0.23
HERPUD1-201ENST00000300302 TBC1D28Q2M2D7 210 aa13.62□□□□□ -0.23
HERPUD1-201ENST00000300302 CLVS2Q5SYC1 327 aa13.62□□□□□ -0.23
HERPUD1-201ENST00000300302 ZNF610Q8N9Z0 462 aa13.62□□□□□ -0.23
HERPUD1-201ENST00000300302 SPSB1Q96BD6 273 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms