RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 TMEM176BQ3YBM2 270 aaPredicted RBP21.55■■□□□ 1.04
SPTSSA-201ENST00000298130 NKAIN1Q4KMZ8 207 aa21.55■■□□□ 1.04
SPTSSA-201ENST00000298130 C5orf46Q6UWT4 87 aa21.55■■□□□ 1.04
SPTSSA-201ENST00000298130 TMEM59Q9BXS4 323 aa21.55■■□□□ 1.04
SPTSSA-201ENST00000298130 GLS2Q9UI32 602 aa21.55■■□□□ 1.04
SPTSSA-201ENST00000298130 QDPRP09417 244 aa21.54■■□□□ 1.04
SPTSSA-201ENST00000298130 GABREP78334 506 aa21.54■■□□□ 1.04
SPTSSA-201ENST00000298130 SGCAQ16586 387 aa21.54■■□□□ 1.04
SPTSSA-201ENST00000298130 TMEM71Q6P5X7 295 aa21.54■■□□□ 1.04
SPTSSA-201ENST00000298130 HOGA1Q86XE5 327 aa21.54■■□□□ 1.04
SPTSSA-201ENST00000298130 UQCC2Q9BRT2 126 aa21.54■■□□□ 1.04
SPTSSA-201ENST00000298130 OR5AC2Q9NZP5 309 aa21.54■■□□□ 1.04
SPTSSA-201ENST00000298130 GSKIPQ9P0R6 139 aa21.54■■□□□ 1.04
SPTSSA-201ENST00000298130 IGKV1-9A0A0C4DH69 117 aa21.54■■□□□ 1.04
SPTSSA-201ENST00000298130 PGA4P0DJD7 388 aa21.54■■□□□ 1.04
SPTSSA-201ENST00000298130 PGA3P0DJD8 388 aa21.54■■□□□ 1.04
SPTSSA-201ENST00000298130 GLB1P16278 677 aa21.54■■□□□ 1.04
SPTSSA-201ENST00000298130 CX3CR1P49238 355 aa21.54■■□□□ 1.04
SPTSSA-201ENST00000298130 PLPPR5Q32ZL2 321 aa21.54■■□□□ 1.04
SPTSSA-201ENST00000298130 PLEKHN1Q494U1 663 aaPredicted RBP21.54■■□□□ 1.04
SPTSSA-201ENST00000298130 TMEM17Q86X19 198 aa21.54■■□□□ 1.04
SPTSSA-201ENST00000298130 GTPBP8Q8N3Z3 284 aaPredicted RBP21.54■■□□□ 1.04
SPTSSA-201ENST00000298130 OR51F2Q8NH61 342 aa21.54■■□□□ 1.04
SPTSSA-201ENST00000298130 TERB2Q8NHR7 220 aa21.54■■□□□ 1.04
SPTSSA-201ENST00000298130 ZNF107Q9UII5 783 aaPredicted RBP21.54■■□□□ 1.04
SPTSSA-201ENST00000298130 NCOA6Q14686 2063 aaPredicted RBP21.54■■□□□ 1.04
SPTSSA-201ENST00000298130 IGHV3-15A0A0B4J1V0 119 aa21.53■■□□□ 1.04
SPTSSA-201ENST00000298130 ZNF878C9JN71 531 aa21.53■■□□□ 1.04
SPTSSA-201ENST00000298130 ACTL6AO96019 429 aa21.53■■□□□ 1.04
SPTSSA-201ENST00000298130 GLRA1P23415 457 aa21.53■■□□□ 1.04
SPTSSA-201ENST00000298130 CLEC18BQ6UXF7 455 aa21.53■■□□□ 1.04
SPTSSA-201ENST00000298130 MISPQ8IVT2 679 aa21.53■■□□□ 1.04
SPTSSA-201ENST00000298130 MARC2Q969Z3 335 aa21.53■■□□□ 1.04
SPTSSA-201ENST00000298130 FSCN3Q9NQT6 498 aa21.53■■□□□ 1.04
SPTSSA-201ENST00000298130 F5H5K5 113 aa21.53■■□□□ 1.04
SPTSSA-201ENST00000298130 ADCYAP1P18509 176 aa21.53■■□□□ 1.04
SPTSSA-201ENST00000298130 NOXO1Q8NFA2 376 aa21.53■■□□□ 1.04
SPTSSA-201ENST00000298130 ZNF775Q96BV0 537 aaPredicted RBP21.53■■□□□ 1.04
SPTSSA-201ENST00000298130 WDR77Q9BQA1 342 aaPredicted RBP21.53■■□□□ 1.04
SPTSSA-201ENST00000298130 ELL3Q9HB65 397 aaPredicted RBP21.53■■□□□ 1.04
SPTSSA-201ENST00000298130 SDHAF3Q9NRP4 125 aa21.53■■□□□ 1.04
SPTSSA-201ENST00000298130 PCP4L1A6NKN8 68 aa21.53■■□□□ 1.04
SPTSSA-201ENST00000298130 ABCD4O14678 606 aa21.53■■□□□ 1.04
SPTSSA-201ENST00000298130 TRAF3IP2O43734 574 aaPredicted RBP21.53■■□□□ 1.04
SPTSSA-201ENST00000298130 IGHG1P01857 330 aa21.53■■□□□ 1.04
SPTSSA-201ENST00000298130 HIST1H1DP16402 221 aaKnown RBP21.53■■□□□ 1.04
SPTSSA-201ENST00000298130 ANKRD55Q3KP44 614 aa21.53■■□□□ 1.04
SPTSSA-201ENST00000298130 PIK3IP1Q96FE7 263 aa21.53■■□□□ 1.04
SPTSSA-201ENST00000298130 TSNAXQ99598 290 aaKnown RBP21.53■■□□□ 1.04
SPTSSA-201ENST00000298130 A0A1B0GW55 424 aa21.52■■□□□ 1.04
SPTSSA-201ENST00000298130 G3V3Y1 287 aa21.52■■□□□ 1.04
SPTSSA-201ENST00000298130 ZNF205O95201 554 aa21.52■■□□□ 1.04
SPTSSA-201ENST00000298130 CELA2AP08217 269 aa21.52■■□□□ 1.04
SPTSSA-201ENST00000298130 DUX4L2P0CJ85 424 aa21.52■■□□□ 1.04
SPTSSA-201ENST00000298130 DUX4L3P0CJ86 424 aa21.52■■□□□ 1.04
SPTSSA-201ENST00000298130 DUX4L4P0CJ87 422 aa21.52■■□□□ 1.04
SPTSSA-201ENST00000298130 DUX4L5P0CJ88 424 aa21.52■■□□□ 1.04
SPTSSA-201ENST00000298130 DUX4L6P0CJ89 424 aa21.52■■□□□ 1.04
SPTSSA-201ENST00000298130 DUX4L7P0CJ90 424 aa21.52■■□□□ 1.04
SPTSSA-201ENST00000298130 THEM4Q5T1C6 240 aa21.52■■□□□ 1.04
SPTSSA-201ENST00000298130 LRRC18Q8N456 261 aa21.52■■□□□ 1.04
SPTSSA-201ENST00000298130 OR10C1Q96KK4 312 aa21.52■■□□□ 1.04
SPTSSA-201ENST00000298130 AIFM2Q9BRQ8 373 aa21.52■■□□□ 1.04
SPTSSA-201ENST00000298130 DUX4Q9UBX2 424 aa21.52■■□□□ 1.04
SPTSSA-201ENST00000298130 KNG1P01042 644 aa21.52■■□□□ 1.03
SPTSSA-201ENST00000298130 HOXB5P09067 269 aa21.52■■□□□ 1.03
SPTSSA-201ENST00000298130 PTGDSP41222 190 aa21.52■■□□□ 1.03
SPTSSA-201ENST00000298130 SLC6A9P48067 706 aa21.52■■□□□ 1.03
SPTSSA-201ENST00000298130 PDSS1Q5T2R2 415 aa21.52■■□□□ 1.03
SPTSSA-201ENST00000298130 ZNF576Q9H609 170 aa21.52■■□□□ 1.03
SPTSSA-201ENST00000298130 ACKR4Q9NPB9 350 aa21.52■■□□□ 1.03
SPTSSA-201ENST00000298130 HLA-GP17693 338 aa21.51■■□□□ 1.03
SPTSSA-201ENST00000298130 SERPINA2P20848 420 aa21.51■■□□□ 1.03
SPTSSA-201ENST00000298130 ZNF529Q6P280 563 aa21.51■■□□□ 1.03
SPTSSA-201ENST00000298130 CBLN2Q8IUK8 224 aa21.51■■□□□ 1.03
SPTSSA-201ENST00000298130 PUSL1Q8N0Z8 303 aaKnown RBP21.51■■□□□ 1.03
SPTSSA-201ENST00000298130 DTWD2Q8NBA8 298 aa21.51■■□□□ 1.03
SPTSSA-201ENST00000298130 OR51T1Q8NGJ9 327 aa21.51■■□□□ 1.03
SPTSSA-201ENST00000298130 AMY2BP19961 511 aa21.51■■□□□ 1.03
SPTSSA-201ENST00000298130 P2RY4P51582 365 aa21.51■■□□□ 1.03
SPTSSA-201ENST00000298130 SUPT4H1P63272 117 aaKnown RBP21.51■■□□□ 1.03
SPTSSA-201ENST00000298130 DRAM2Q6UX65 266 aa21.51■■□□□ 1.03
SPTSSA-201ENST00000298130 NAXEQ8NCW5 288 aa21.51■■□□□ 1.03
SPTSSA-201ENST00000298130 CPNE2Q96FN4 548 aaPredicted RBP21.51■■□□□ 1.03
SPTSSA-201ENST00000298130 METTL8Q9H825 291 aaKnown RBP21.51■■□□□ 1.03
SPTSSA-201ENST00000298130 DBX1A6NMT0 343 aa21.5■■□□□ 1.03
SPTSSA-201ENST00000298130 SCRG1O75711 98 aa21.5■■□□□ 1.03
SPTSSA-201ENST00000298130 GLULP15104 373 aa21.5■■□□□ 1.03
SPTSSA-201ENST00000298130 ZNF43P17038 809 aa21.5■■□□□ 1.03
SPTSSA-201ENST00000298130 NKAPLQ5M9Q1 402 aa21.5■■□□□ 1.03
SPTSSA-201ENST00000298130 RHBDD2Q6NTF9 364 aa21.5■■□□□ 1.03
SPTSSA-201ENST00000298130 PGAP1Q75T13 922 aa21.5■■□□□ 1.03
SPTSSA-201ENST00000298130 SAV1Q9H4B6 383 aaPredicted RBP21.5■■□□□ 1.03
SPTSSA-201ENST00000298130 GPR132Q9UNW8 380 aa21.5■■□□□ 1.03
SPTSSA-201ENST00000298130 EML6Q6ZMW3 1958 aa21.5■■□□□ 1.03
SPTSSA-201ENST00000298130 CLDN17P56750 224 aa21.5■■□□□ 1.03
SPTSSA-201ENST00000298130 TMEM128Q5BJH2 165 aa21.5■■□□□ 1.03
SPTSSA-201ENST00000298130 OR13G1Q8NGZ3 307 aa21.5■■□□□ 1.03
SPTSSA-201ENST00000298130 ZNF416Q9BWM5 594 aa21.5■■□□□ 1.03
SPTSSA-201ENST00000298130 PNRC2Q9NPJ4 139 aaKnown RBP21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms