RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 BEST3Q8N1M1 668 aa10.34□□□□□ -0.75
RHO-201ENST00000296271 PADI1Q9ULC6 663 aa10.34□□□□□ -0.75
RHO-201ENST00000296271 LNP1A1A4G5 178 aa10.33□□□□□ -0.76
RHO-201ENST00000296271 METTL21EPA6NDL7 271 aa10.33□□□□□ -0.76
RHO-201ENST00000296271 L7N2F9 121 aa10.33□□□□□ -0.76
RHO-201ENST00000296271 B4GALT1P15291 398 aa10.33□□□□□ -0.76
RHO-201ENST00000296271 ZNF24P17028 368 aa10.33□□□□□ -0.76
RHO-201ENST00000296271 AVPR2P30518 371 aa10.33□□□□□ -0.76
RHO-201ENST00000296271 DUSP3P51452 185 aaPredicted RBP10.33□□□□□ -0.76
RHO-201ENST00000296271 GGNQ86UU5 652 aa10.33□□□□□ -0.76
RHO-201ENST00000296271 OR10R2Q8NGX6 335 aa10.33□□□□□ -0.76
RHO-201ENST00000296271 TMEM54Q969K7 222 aa10.33□□□□□ -0.76
RHO-201ENST00000296271 PNPLA2Q96AD5 504 aa10.33□□□□□ -0.76
RHO-201ENST00000296271 ARHGAP5-AS1Q96IT6 56 aa10.33□□□□□ -0.76
RHO-201ENST00000296271 RADILQ96JH8 1075 aa10.33□□□□□ -0.76
RHO-201ENST00000296271 ULBP2Q9BZM5 246 aa10.33□□□□□ -0.76
RHO-201ENST00000296271 NELFAQ9H3P2 528 aa10.33□□□□□ -0.76
RHO-201ENST00000296271 CRLF2Q9HC73 371 aa10.33□□□□□ -0.76
RHO-201ENST00000296271 PLEK2Q9NYT0 353 aa10.33□□□□□ -0.76
RHO-201ENST00000296271 TRAV14DV4A0A0A6YYC5 116 aa10.33□□□□□ -0.76
RHO-201ENST00000296271 F5H5P2 479 aa10.33□□□□□ -0.76
RHO-201ENST00000296271 CDC14BO60729 498 aa10.33□□□□□ -0.76
RHO-201ENST00000296271 BPNT1O95861 308 aa10.33□□□□□ -0.76
RHO-201ENST00000296271 CD74P04233 296 aa10.33□□□□□ -0.76
RHO-201ENST00000296271 RAP2BP61225 183 aa10.33□□□□□ -0.76
RHO-201ENST00000296271 SIGLEC14Q08ET2 396 aa10.33□□□□□ -0.76
RHO-201ENST00000296271 PPP1R1AQ13522 171 aa10.33□□□□□ -0.76
RHO-201ENST00000296271 TRA2AQ13595 282 aaKnown RBP eCLIP10.33□□□□□ -0.76
RHO-201ENST00000296271 KCNMB1Q16558 191 aa10.33□□□□□ -0.76
RHO-201ENST00000296271 ZNF239Q16600 458 aaKnown RBP10.33□□□□□ -0.76
RHO-201ENST00000296271 BEX5Q5H9J7 111 aa10.33□□□□□ -0.76
RHO-201ENST00000296271 DCAF12Q5T6F0 453 aa10.33□□□□□ -0.76
RHO-201ENST00000296271 ZNF774Q6NX45 483 aa10.33□□□□□ -0.76
RHO-201ENST00000296271 BATF2Q8N1L9 274 aa10.33□□□□□ -0.76
RHO-201ENST00000296271 AKR7LQ8NHP1 331 aa10.33□□□□□ -0.76
RHO-201ENST00000296271 CASTOR1Q8WTX7 329 aa10.33□□□□□ -0.76
RHO-201ENST00000296271 ABHD3Q8WU67 409 aa10.33□□□□□ -0.76
RHO-201ENST00000296271 ST8SIA4Q92187 359 aa10.33□□□□□ -0.76
RHO-201ENST00000296271 PSMF1Q92530 271 aa10.33□□□□□ -0.76
RHO-201ENST00000296271 NTNG2Q96CW9 530 aa10.33□□□□□ -0.76
RHO-201ENST00000296271 SLX1AQ9BQ83 275 aa10.33□□□□□ -0.76
RHO-201ENST00000296271 CLEC4MQ9H2X3 399 aaPredicted RBP10.33□□□□□ -0.76
RHO-201ENST00000296271 P4HTMQ9NXG6 502 aa10.33□□□□□ -0.76
RHO-201ENST00000296271 FOXD3Q9UJU5 478 aaPredicted RBP10.33□□□□□ -0.76
RHO-201ENST00000296271 C9orf172C9J069 976 aa10.32□□□□□ -0.76
RHO-201ENST00000296271 STMND1H3BQB6 276 aa10.32□□□□□ -0.76
RHO-201ENST00000296271 YKT6O15498 198 aa10.32□□□□□ -0.76
RHO-201ENST00000296271 CBR3O75828 277 aa10.32□□□□□ -0.76
RHO-201ENST00000296271 HLA-AP01891 365 aaKnown RBP10.32□□□□□ -0.76
RHO-201ENST00000296271 PPP3CBP16298 524 aa10.32□□□□□ -0.76
RHO-201ENST00000296271 AKR1C4P17516 323 aa10.32□□□□□ -0.76
RHO-201ENST00000296271 RAB6AP20340 208 aa10.32□□□□□ -0.76
RHO-201ENST00000296271 ACKR3P25106 362 aa10.32□□□□□ -0.76
RHO-201ENST00000296271 MPLP40238 635 aa10.32□□□□□ -0.76
RHO-201ENST00000296271 P2RX3P56373 397 aa10.32□□□□□ -0.76
RHO-201ENST00000296271 SEC61A1P61619 476 aaKnown RBP10.32□□□□□ -0.76
RHO-201ENST00000296271 RAC1P63000 192 aa10.32□□□□□ -0.76
RHO-201ENST00000296271 BAMBIQ13145 260 aa10.32□□□□□ -0.76
RHO-201ENST00000296271 ATXN7L3Q14CW9 347 aaPredicted RBP10.32□□□□□ -0.76
RHO-201ENST00000296271 RNASE10Q5GAN6 216 aaKnown RBP10.32□□□□□ -0.76
RHO-201ENST00000296271 ACER2Q5QJU3 275 aa10.32□□□□□ -0.76
RHO-201ENST00000296271 C9orf135Q5VTT2 229 aa10.32□□□□□ -0.76
RHO-201ENST00000296271 RAB11FIP2Q7L804 512 aa10.32□□□□□ -0.76
RHO-201ENST00000296271 C12orf45Q8N5I9 185 aaPredicted RBP10.32□□□□□ -0.76
RHO-201ENST00000296271 STEAP2Q8NFT2 490 aa10.32□□□□□ -0.76
RHO-201ENST00000296271 FOXRED1Q96CU9 486 aaPredicted RBP10.32□□□□□ -0.76
RHO-201ENST00000296271 B3GNT2Q9NY97 397 aa10.32□□□□□ -0.76
RHO-201ENST00000296271 LOC102725191A0A1B0GVB3 256 aa10.32□□□□□ -0.76
RHO-201ENST00000296271 SULT1C2O00338 296 aa10.32□□□□□ -0.76
RHO-201ENST00000296271 SDCBPO00560 298 aaPredicted RBP10.32□□□□□ -0.76
RHO-201ENST00000296271 TLX3O43711 291 aaPredicted RBP10.32□□□□□ -0.76
RHO-201ENST00000296271 TPPPO94811 219 aa10.32□□□□□ -0.76
RHO-201ENST00000296271 ZNF205O95201 554 aa10.32□□□□□ -0.76
RHO-201ENST00000296271 SPINK2P20155 84 aa10.32□□□□□ -0.76
RHO-201ENST00000296271 SERPINA2P20848 420 aa10.32□□□□□ -0.76
RHO-201ENST00000296271 SRYQ05066 204 aa10.32□□□□□ -0.76
RHO-201ENST00000296271 HLXQ14774 488 aaPredicted RBP10.32□□□□□ -0.76
RHO-201ENST00000296271 KISS1Q15726 138 aa10.32□□□□□ -0.76
RHO-201ENST00000296271 MICBQ29980 383 aa10.32□□□□□ -0.76
RHO-201ENST00000296271 FAM109AQ8N4B1 249 aa10.32□□□□□ -0.76
RHO-201ENST00000296271 MARCH1Q8TCQ1 289 aa10.32□□□□□ -0.76
RHO-201ENST00000296271 SCPEP1Q9HB40 452 aa10.32□□□□□ -0.76
RHO-201ENST00000296271 PIGLQ9Y2B2 252 aa10.32□□□□□ -0.76
RHO-201ENST00000296271 A0A087WZY1 265 aa10.31□□□□□ -0.76
RHO-201ENST00000296271 ANGPTL7O43827 346 aa10.31□□□□□ -0.76
RHO-201ENST00000296271 P04436 131 aa10.31□□□□□ -0.76
RHO-201ENST00000296271 CASRP41180 1078 aa10.31□□□□□ -0.76
RHO-201ENST00000296271 RGS19P49795 217 aa10.31□□□□□ -0.76
RHO-201ENST00000296271 TOR2AQ5JU69 321 aa10.31□□□□□ -0.76
RHO-201ENST00000296271 CXorf58Q96LI9 332 aa10.31□□□□□ -0.76
RHO-201ENST00000296271 SIGLEC12Q96PQ1 595 aa10.31□□□□□ -0.76
RHO-201ENST00000296271 UQCC2Q9BRT2 126 aa10.31□□□□□ -0.76
RHO-201ENST00000296271 HDHD3Q9BSH5 251 aaPredicted RBP10.31□□□□□ -0.76
RHO-201ENST00000296271 ARL6Q9H0F7 186 aa10.31□□□□□ -0.76
RHO-201ENST00000296271 ELL3Q9HB65 397 aaPredicted RBP10.31□□□□□ -0.76
RHO-201ENST00000296271 IFT46Q9NQC8 304 aa10.31□□□□□ -0.76
RHO-201ENST00000296271 GPR173Q9NS66 373 aa10.31□□□□□ -0.76
RHO-201ENST00000296271 PLA2G3Q9NZ20 509 aa10.31□□□□□ -0.76
RHO-201ENST00000296271 PTTG3PQ9NZH4 202 aa10.31□□□□□ -0.76
RHO-201ENST00000296271 COQ3Q9NZJ6 369 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms