RNA–Protein interactions for RNA: ENST00000296098.4

TRIM54-201, Transcript of tripartite motif containing 54, humanhuman

TSL 1 (best) BASIC

Gene TRIM54, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-201ENST00000296098 OC90Q02509 493 aaPredicted RBP21.05■□□□□ 0.96
TRIM54-201ENST00000296098 ECH1Q13011 328 aa21.05■□□□□ 0.96
TRIM54-201ENST00000296098 GRK1Q15835 563 aa21.05■□□□□ 0.96
TRIM54-201ENST00000296098 FAM27BQ5VT28 67 aa21.05■□□□□ 0.96
TRIM54-201ENST00000296098 C11orf88Q6PI97 169 aa21.05■□□□□ 0.96
TRIM54-201ENST00000296098 ZNF775Q96BV0 537 aaPredicted RBP21.05■□□□□ 0.96
TRIM54-201ENST00000296098 FBXO17Q96EF6 278 aa21.05■□□□□ 0.96
TRIM54-201ENST00000296098 ZNF837Q96EG3 531 aaPredicted RBP21.05■□□□□ 0.96
TRIM54-201ENST00000296098 ZNF799Q96GE5 643 aa21.05■□□□□ 0.96
TRIM54-201ENST00000296098 LIN37Q96GY3 246 aaPredicted RBP21.05■□□□□ 0.96
TRIM54-201ENST00000296098 TMEM59Q9BXS4 323 aa21.05■□□□□ 0.96
TRIM54-201ENST00000296098 SPRY4Q9C004 299 aa21.05■□□□□ 0.96
TRIM54-201ENST00000296098 IRF2BPLQ9H1B7 796 aa21.05■□□□□ 0.96
TRIM54-201ENST00000296098 V9GYS6 101 aa21.05■□□□□ 0.96
TRIM54-201ENST00000296098 DMDP11532 3685 aa21.04■□□□□ 0.96
TRIM54-201ENST00000296098 A0A0A6YYD4 124 aa21.04■□□□□ 0.96
TRIM54-201ENST00000296098 CXCL13O43927 109 aa21.04■□□□□ 0.96
TRIM54-201ENST00000296098 NOS1APO75052 506 aaPredicted RBP21.04■□□□□ 0.96
TRIM54-201ENST00000296098 TRAPPC6AO75865 159 aa21.04■□□□□ 0.96
TRIM54-201ENST00000296098 SNAPC5O75971 98 aa21.04■□□□□ 0.96
TRIM54-201ENST00000296098 CASRP41180 1078 aa21.04■□□□□ 0.96
TRIM54-201ENST00000296098 WIPI1Q5MNZ9 446 aaPredicted RBP21.04■□□□□ 0.96
TRIM54-201ENST00000296098 SPTSSAQ969W0 71 aa21.04■□□□□ 0.96
TRIM54-201ENST00000296098 PLEKHA6Q9Y2H5 1048 aa21.04■□□□□ 0.96
TRIM54-201ENST00000296098 OR14I1A6ND48 311 aa21.04■□□□□ 0.96
TRIM54-201ENST00000296098 ZNF716A6NP11 495 aa21.04■□□□□ 0.96
TRIM54-201ENST00000296098 RGS11O94810 467 aa21.04■□□□□ 0.96
TRIM54-201ENST00000296098 GDF1P27539 372 aa21.04■□□□□ 0.96
TRIM54-201ENST00000296098 RSPO1Q2MKA7 263 aaPredicted RBP21.04■□□□□ 0.96
TRIM54-201ENST00000296098 SLC22A6Q4U2R8 563 aa21.04■□□□□ 0.96
TRIM54-201ENST00000296098 ABLIM2Q6H8Q1 611 aa21.04■□□□□ 0.96
TRIM54-201ENST00000296098 OR52W1Q6IF63 320 aa21.04■□□□□ 0.96
TRIM54-201ENST00000296098 RTN4RL2Q86UN3 420 aa21.04■□□□□ 0.96
TRIM54-201ENST00000296098 CD163Q86VB7 1156 aa21.04■□□□□ 0.96
TRIM54-201ENST00000296098 OR8H3Q8N146 312 aa21.04■□□□□ 0.96
TRIM54-201ENST00000296098 PNLDC1Q8NA58 520 aaKnown RBP21.04■□□□□ 0.96
TRIM54-201ENST00000296098 OR2V1Q8NHB1 315 aa21.04■□□□□ 0.96
TRIM54-201ENST00000296098 SLC39A7Q92504 469 aa21.04■□□□□ 0.96
TRIM54-201ENST00000296098 PSMF1Q92530 271 aa21.04■□□□□ 0.96
TRIM54-201ENST00000296098 ADGRG7Q96K78 797 aa21.04■□□□□ 0.96
TRIM54-201ENST00000296098 L7N2F9 121 aa21.03■□□□□ 0.96
TRIM54-201ENST00000296098 SSX5O60225 188 aa21.03■□□□□ 0.96
TRIM54-201ENST00000296098 PRF1P14222 555 aa21.03■□□□□ 0.96
TRIM54-201ENST00000296098 CXCL2P19875 107 aa21.03■□□□□ 0.96
TRIM54-201ENST00000296098 POU3F2P20265 443 aaPredicted RBP21.03■□□□□ 0.96
TRIM54-201ENST00000296098 CXADRP78310 365 aa21.03■□□□□ 0.96
TRIM54-201ENST00000296098 EXOSC2Q13868 293 aaKnown RBP21.03■□□□□ 0.96
TRIM54-201ENST00000296098 FAM189A2Q15884 450 aa21.03■□□□□ 0.96
TRIM54-201ENST00000296098 DCAF12L2Q5VW00 463 aa21.03■□□□□ 0.96
TRIM54-201ENST00000296098 GPR137CQ8N3F9 429 aa21.03■□□□□ 0.96
TRIM54-201ENST00000296098 C12orf45Q8N5I9 185 aaPredicted RBP21.03■□□□□ 0.96
TRIM54-201ENST00000296098 ASB13Q8WXK3 278 aa21.03■□□□□ 0.96
TRIM54-201ENST00000296098 BANF2Q9H503 90 aa21.03■□□□□ 0.96
TRIM54-201ENST00000296098 FOXJ2Q9P0K8 574 aa21.03■□□□□ 0.96
TRIM54-201ENST00000296098 MRPS18CQ9Y3D5 142 aaKnown RBP21.03■□□□□ 0.96
TRIM54-201ENST00000296098 CRTAPO75718 401 aaPredicted RBP21.02■□□□□ 0.96
TRIM54-201ENST00000296098 DBHP09172 617 aa21.02■□□□□ 0.96
TRIM54-201ENST00000296098 GSTP1P09211 210 aaKnown RBP21.02■□□□□ 0.96
TRIM54-201ENST00000296098 TBPP20226 339 aa21.02■□□□□ 0.96
TRIM54-201ENST00000296098 NFYAP23511 347 aaPredicted RBP21.02■□□□□ 0.96
TRIM54-201ENST00000296098 RAB35Q15286 201 aa21.02■□□□□ 0.96
TRIM54-201ENST00000296098 OR10D3Q8NH80 312 aa21.02■□□□□ 0.96
TRIM54-201ENST00000296098 PP6455Q8WZ26 134 aa21.02■□□□□ 0.96
TRIM54-201ENST00000296098 ROBO4Q8WZ75 1007 aa21.02■□□□□ 0.96
TRIM54-201ENST00000296098 RAB3CQ96E17 227 aa21.02■□□□□ 0.96
TRIM54-201ENST00000296098 THOC3Q96J01 351 aaKnown RBP21.02■□□□□ 0.96
TRIM54-201ENST00000296098 KCNK7Q9Y2U2 307 aa21.02■□□□□ 0.96
TRIM54-201ENST00000296098 CCDC187A0A096LP49 1063 aa21.02■□□□□ 0.96
TRIM54-201ENST00000296098 HIST1H1DP16402 221 aaKnown RBP21.02■□□□□ 0.96
TRIM54-201ENST00000296098 FAHP16930 419 aa21.02■□□□□ 0.96
TRIM54-201ENST00000296098 HRH1P35367 487 aa21.02■□□□□ 0.96
TRIM54-201ENST00000296098 STARP49675 285 aa21.02■□□□□ 0.96
TRIM54-201ENST00000296098 IKZF1Q13422 519 aa21.02■□□□□ 0.96
TRIM54-201ENST00000296098 OPCMLQ14982 345 aa21.02■□□□□ 0.96
TRIM54-201ENST00000296098 Q6ZSR3 168 aa21.02■□□□□ 0.96
TRIM54-201ENST00000296098 CCDC54Q8NEL0 328 aa21.02■□□□□ 0.96
TRIM54-201ENST00000296098 CITED4Q96RK1 184 aa21.02■□□□□ 0.96
TRIM54-201ENST00000296098 CHST5Q9GZS9 411 aa21.02■□□□□ 0.96
TRIM54-201ENST00000296098 CRLF2Q9HC73 371 aa21.02■□□□□ 0.96
TRIM54-201ENST00000296098 UBQLN2Q9UHD9 624 aa21.02■□□□□ 0.96
TRIM54-201ENST00000296098 VSIG4Q9Y279 399 aa21.02■□□□□ 0.96
TRIM54-201ENST00000296098 PINLYPA6NC86 204 aa21.01■□□□□ 0.95
TRIM54-201ENST00000296098 F10P00742 488 aa21.01■□□□□ 0.95
TRIM54-201ENST00000296098 KISS1Q15726 138 aa21.01■□□□□ 0.95
TRIM54-201ENST00000296098 AAED1Q7RTV5 226 aa21.01■□□□□ 0.95
TRIM54-201ENST00000296098 OR56B1Q8NGI3 324 aa21.01■□□□□ 0.95
TRIM54-201ENST00000296098 NPRL2Q8WTW4 380 aa21.01■□□□□ 0.95
TRIM54-201ENST00000296098 LOXL4Q96JB6 756 aa21.01■□□□□ 0.95
TRIM54-201ENST00000296098 URM1Q9BTM9 101 aaKnown RBP21.01■□□□□ 0.95
TRIM54-201ENST00000296098 OR10A2Q9H208 303 aa21.01■□□□□ 0.95
TRIM54-201ENST00000296098 A0A1W2PP11 408 aa21■□□□□ 0.95
TRIM54-201ENST00000296098 SOCS1O15524 211 aa21■□□□□ 0.95
TRIM54-201ENST00000296098 SGCEO43556 437 aa21■□□□□ 0.95
TRIM54-201ENST00000296098 CST2P09228 141 aa21■□□□□ 0.95
TRIM54-201ENST00000296098 CD59P13987 128 aa21■□□□□ 0.95
TRIM54-201ENST00000296098 CNR1P21554 472 aa21■□□□□ 0.95
TRIM54-201ENST00000296098 DHRS2Q13268 280 aa21■□□□□ 0.95
TRIM54-201ENST00000296098 PLAC9Q5JTB6 97 aa21■□□□□ 0.95
TRIM54-201ENST00000296098 C17orf107Q6ZR85 190 aa21■□□□□ 0.95
TRIM54-201ENST00000296098 NAXDQ8IW45 347 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms