RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 C4orf45Q96LM5 186 aa11.49□□□□□ -0.57
PTCD1-201ENST00000292478 SPACA5Q96QH8 159 aa11.49□□□□□ -0.57
PTCD1-201ENST00000292478 ING1Q9UK53 422 aaPredicted RBP11.49□□□□□ -0.57
PTCD1-201ENST00000292478 NEU3Q9UQ49 428 aa11.49□□□□□ -0.57
PTCD1-201ENST00000292478 BCL2L11O43521 198 aa11.49□□□□□ -0.57
PTCD1-201ENST00000292478 LIMS3P0CW19 117 aa11.49□□□□□ -0.57
PTCD1-201ENST00000292478 LIMS4P0CW20 117 aa11.49□□□□□ -0.57
PTCD1-201ENST00000292478 TAS2R45P59539 299 aa11.49□□□□□ -0.57
PTCD1-201ENST00000292478 SSX2Q16385 188 aa11.49□□□□□ -0.57
PTCD1-201ENST00000292478 OR4D9Q8NGE8 314 aa11.49□□□□□ -0.57
PTCD1-201ENST00000292478 OR4C3Q8NH37 302 aa11.49□□□□□ -0.57
PTCD1-201ENST00000292478 PELI1Q96FA3 418 aa11.49□□□□□ -0.57
PTCD1-201ENST00000292478 IGHV1OR15-9A0A0B4J2B8 117 aa11.49□□□□□ -0.57
PTCD1-201ENST00000292478 IGHV5-51A0A0C4DH38 117 aa11.49□□□□□ -0.57
PTCD1-201ENST00000292478 ZFP92A6NM28 416 aa11.49□□□□□ -0.57
PTCD1-201ENST00000292478 FPR2P25090 351 aa11.49□□□□□ -0.57
PTCD1-201ENST00000292478 OPRM1P35372 400 aa11.49□□□□□ -0.57
PTCD1-201ENST00000292478 PIGPP57054 158 aa11.49□□□□□ -0.57
PTCD1-201ENST00000292478 CLPPQ16740 277 aaPredicted RBP11.49□□□□□ -0.57
PTCD1-201ENST00000292478 SMIM21Q3B7S5 101 aa11.49□□□□□ -0.57
PTCD1-201ENST00000292478 ABI3BPQ7Z7G0 1075 aa11.49□□□□□ -0.57
PTCD1-201ENST00000292478 RTN4IP1Q8WWV3 396 aaPredicted RBP11.49□□□□□ -0.57
PTCD1-201ENST00000292478 EDEM2Q9BV94 578 aa11.49□□□□□ -0.57
PTCD1-201ENST00000292478 ACTR3CQ9C0K3 210 aaPredicted RBP11.49□□□□□ -0.57
PTCD1-201ENST00000292478 RNF32Q9H0A6 362 aa11.49□□□□□ -0.57
PTCD1-201ENST00000292478 C20orf141Q9NUB4 165 aa11.49□□□□□ -0.57
PTCD1-201ENST00000292478 PPP1R3CQ9UQK1 317 aa11.49□□□□□ -0.57
PTCD1-201ENST00000292478 ATP23Q9Y6H3 246 aa11.49□□□□□ -0.57
PTCD1-201ENST00000292478 A0A1W2PQD3 144 aa11.49□□□□□ -0.57
PTCD1-201ENST00000292478 ICMTO60725 284 aa11.49□□□□□ -0.57
PTCD1-201ENST00000292478 NDUFB6O95139 128 aa11.49□□□□□ -0.57
PTCD1-201ENST00000292478 METTL15P1P0C7V9 234 aa11.49□□□□□ -0.57
PTCD1-201ENST00000292478 DEFA4P12838 97 aa11.49□□□□□ -0.57
PTCD1-201ENST00000292478 PCMT1P22061 227 aa11.49□□□□□ -0.57
PTCD1-201ENST00000292478 TIAL1Q01085 375 aaKnown RBP eCLIP11.49□□□□□ -0.57
PTCD1-201ENST00000292478 ACOT6Q3I5F7 207 aaPredicted RBP11.49□□□□□ -0.57
PTCD1-201ENST00000292478 LINC00303Q3SY05 128 aa11.49□□□□□ -0.57
PTCD1-201ENST00000292478 CDONQ4KMG0 1287 aa11.49□□□□□ -0.57
PTCD1-201ENST00000292478 MRM1Q6IN84 353 aaKnown RBP11.49□□□□□ -0.57
PTCD1-201ENST00000292478 JMJD6Q6NYC1 403 aaPredicted RBP11.49□□□□□ -0.57
PTCD1-201ENST00000292478 ROBO4Q8WZ75 1007 aa11.49□□□□□ -0.57
PTCD1-201ENST00000292478 SLC23A1Q9UHI7 598 aa11.49□□□□□ -0.57
PTCD1-201ENST00000292478 TUBGCP6Q96RT7 1819 aa11.48□□□□□ -0.57
PTCD1-201ENST00000292478 ZNF724A8MTY0 619 aa11.48□□□□□ -0.57
PTCD1-201ENST00000292478 WDR38Q5JTN6 314 aa11.48□□□□□ -0.57
PTCD1-201ENST00000292478 TOR2AQ5JU69 321 aa11.48□□□□□ -0.57
PTCD1-201ENST00000292478 NLRC3Q7RTR2 1065 aa11.48□□□□□ -0.57
PTCD1-201ENST00000292478 NUMA1Q14980 2115 aa11.48□□□□□ -0.57
PTCD1-201ENST00000292478 ADAM10O14672 748 aa11.48□□□□□ -0.57
PTCD1-201ENST00000292478 ABCD4O14678 606 aa11.48□□□□□ -0.57
PTCD1-201ENST00000292478 COL9A1P20849 921 aa11.48□□□□□ -0.57
PTCD1-201ENST00000292478 FUT3P21217 361 aa11.48□□□□□ -0.57
PTCD1-201ENST00000292478 FAAP20Q6NZ36 180 aa11.48□□□□□ -0.57
PTCD1-201ENST00000292478 HIF1ANQ9NWT6 349 aa11.48□□□□□ -0.57
PTCD1-201ENST00000292478 KLK11Q9UBX7 282 aa11.48□□□□□ -0.57
PTCD1-201ENST00000292478 RPH3ALQ9UNE2 315 aa11.48□□□□□ -0.57
PTCD1-201ENST00000292478 MKRN2OSH3BPM6 223 aa11.48□□□□□ -0.57
PTCD1-201ENST00000292478 WDR1O75083 606 aa11.48□□□□□ -0.57
PTCD1-201ENST00000292478 NXPH3O95157 252 aa11.48□□□□□ -0.57
PTCD1-201ENST00000292478 RAB13P51153 203 aa11.48□□□□□ -0.57
PTCD1-201ENST00000292478 MOB1BQ7L9L4 216 aa11.48□□□□□ -0.57
PTCD1-201ENST00000292478 ZNF680Q8NEM1 530 aa11.48□□□□□ -0.57
PTCD1-201ENST00000292478 ZNF355PQ9NSJ1 428 aa11.48□□□□□ -0.57
PTCD1-201ENST00000292478 UFSP2Q9NUQ7 469 aa11.48□□□□□ -0.57
PTCD1-201ENST00000292478 CYB5R1Q9UHQ9 305 aa11.48□□□□□ -0.57
PTCD1-201ENST00000292478 PRRC2BQ5JSZ5 2229 aaKnown RBP11.48□□□□□ -0.57
PTCD1-201ENST00000292478 RFPL4AA6NLU0 287 aa11.48□□□□□ -0.57
PTCD1-201ENST00000292478 RFPL4AL1F8VTS6 287 aa11.48□□□□□ -0.57
PTCD1-201ENST00000292478 CRYABP02511 175 aaKnown RBP11.48□□□□□ -0.57
PTCD1-201ENST00000292478 GP1BAP07359 652 aa11.48□□□□□ -0.57
PTCD1-201ENST00000292478 CYC1P08574 325 aa11.48□□□□□ -0.57
PTCD1-201ENST00000292478 RPA2P15927 270 aa11.48□□□□□ -0.57
PTCD1-201ENST00000292478 FAM27D1Q5T7N8 215 aa11.48□□□□□ -0.57
PTCD1-201ENST00000292478 GPR119Q8TDV5 335 aa11.48□□□□□ -0.57
PTCD1-201ENST00000292478 TSPAN32Q96QS1 320 aa11.48□□□□□ -0.57
PTCD1-201ENST00000292478 UCK1Q9HA47 277 aa11.48□□□□□ -0.57
PTCD1-201ENST00000292478 TRBV5-3A0A0A0MS03 114 aa11.47□□□□□ -0.57
PTCD1-201ENST00000292478 LY86O95711 162 aa11.47□□□□□ -0.57
PTCD1-201ENST00000292478 EPPINO95925 133 aa11.47□□□□□ -0.57
PTCD1-201ENST00000292478 OR13C7P0DN81 318 aa11.47□□□□□ -0.57
PTCD1-201ENST00000292478 EXOSC2Q13868 293 aaKnown RBP11.47□□□□□ -0.57
PTCD1-201ENST00000292478 SSX1Q16384 188 aa11.47□□□□□ -0.57
PTCD1-201ENST00000292478 SLC25A30Q5SVS4 291 aa11.47□□□□□ -0.57
PTCD1-201ENST00000292478 TMED6Q8WW62 240 aa11.47□□□□□ -0.57
PTCD1-201ENST00000292478 YBX2Q9Y2T7 364 aaKnown RBP11.47□□□□□ -0.57
PTCD1-201ENST00000292478 CCL27Q9Y4X3 112 aa11.47□□□□□ -0.57
PTCD1-201ENST00000292478 FAHP16930 419 aa11.47□□□□□ -0.57
PTCD1-201ENST00000292478 NOVA1P51513 510 aaKnown RBP11.47□□□□□ -0.57
PTCD1-201ENST00000292478 SSPNQ14714 243 aa11.47□□□□□ -0.57
PTCD1-201ENST00000292478 OR1C1Q15619 314 aa11.47□□□□□ -0.57
PTCD1-201ENST00000292478 TMEM92Q6UXU6 159 aa11.47□□□□□ -0.57
PTCD1-201ENST00000292478 MAMSTRQ6ZN01 415 aa11.47□□□□□ -0.57
PTCD1-201ENST00000292478 NUBPLQ8TB37 319 aa11.47□□□□□ -0.57
PTCD1-201ENST00000292478 RBM38Q9H0Z9 239 aaKnown RBP11.47□□□□□ -0.57
PTCD1-201ENST00000292478 MED9Q9NWA0 146 aa11.47□□□□□ -0.57
PTCD1-201ENST00000292478 GPR31O00270 319 aa11.47□□□□□ -0.57
PTCD1-201ENST00000292478 TNFSF14O43557 240 aa11.47□□□□□ -0.57
PTCD1-201ENST00000292478 SSSCA1O60232 199 aa11.47□□□□□ -0.57
PTCD1-201ENST00000292478 SCGB1D1O95968 90 aa11.47□□□□□ -0.57
PTCD1-201ENST00000292478 ELLP55199 621 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms