RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 PPIAL4DF5H284 164 aa8.19□□□□□ -1.1
CCDC58-201ENST00000291458 PRKYO43930 277 aa8.19□□□□□ -1.1
CCDC58-201ENST00000291458 PPIAL4FP0DN26 164 aa8.19□□□□□ -1.1
CCDC58-201ENST00000291458 OPRL1P41146 370 aa8.19□□□□□ -1.1
CCDC58-201ENST00000291458 RASSF2P50749 326 aa8.19□□□□□ -1.1
CCDC58-201ENST00000291458 CRISP1P54107 249 aa8.19□□□□□ -1.1
CCDC58-201ENST00000291458 GNB2P62879 340 aa8.19□□□□□ -1.1
CCDC58-201ENST00000291458 CDK5Q00535 292 aa8.19□□□□□ -1.1
CCDC58-201ENST00000291458 ATP6AP1Q15904 470 aa8.19□□□□□ -1.1
CCDC58-201ENST00000291458 TMEM155Q4W5P6 130 aa8.19□□□□□ -1.1
CCDC58-201ENST00000291458 TEX30Q5JUR7 227 aa8.19□□□□□ -1.1
CCDC58-201ENST00000291458 LYPD2Q6UXB3 125 aa8.19□□□□□ -1.1
CCDC58-201ENST00000291458 SHFQ7M4L6 423 aa8.19□□□□□ -1.1
CCDC58-201ENST00000291458 SLC16A9Q7RTY1 509 aa8.19□□□□□ -1.1
CCDC58-201ENST00000291458 C1QL2Q7Z5L3 287 aa8.19□□□□□ -1.1
CCDC58-201ENST00000291458 LRRC28Q86X40 367 aaPredicted RBP8.19□□□□□ -1.1
CCDC58-201ENST00000291458 KLBQ86Z14 1044 aa8.19□□□□□ -1.1
CCDC58-201ENST00000291458 C1orf87Q8N0U7 546 aa8.19□□□□□ -1.1
CCDC58-201ENST00000291458 RFLNBQ8N5W9 214 aa8.19□□□□□ -1.1
CCDC58-201ENST00000291458 PAPD5Q8NDF8 572 aaKnown RBP8.19□□□□□ -1.1
CCDC58-201ENST00000291458 OR8B3Q8NGG8 313 aa8.19□□□□□ -1.1
CCDC58-201ENST00000291458 RNF133Q8WVZ7 376 aa8.19□□□□□ -1.1
CCDC58-201ENST00000291458 LRTOMTQ8WZ04 291 aa8.19□□□□□ -1.1
CCDC58-201ENST00000291458 UTP4Q969X6 686 aaKnown RBP8.19□□□□□ -1.1
CCDC58-201ENST00000291458 TECTBQ96PL2 329 aa8.19□□□□□ -1.1
CCDC58-201ENST00000291458 OR8B2Q96RD0 313 aa8.19□□□□□ -1.1
CCDC58-201ENST00000291458 TMEM246Q9BRR3 403 aa8.19□□□□□ -1.1
CCDC58-201ENST00000291458 OR10A2Q9H208 303 aa8.19□□□□□ -1.1
CCDC58-201ENST00000291458 RIBC2Q9H4K1 309 aa8.19□□□□□ -1.1
CCDC58-201ENST00000291458 FN3KRPQ9HA64 309 aa8.19□□□□□ -1.1
CCDC58-201ENST00000291458 SLC25A19Q9HC21 320 aa8.19□□□□□ -1.1
CCDC58-201ENST00000291458 LAMP5Q9UJQ1 280 aa8.19□□□□□ -1.1
CCDC58-201ENST00000291458 PPIAL4AQ9Y536 164 aa8.19□□□□□ -1.1
CCDC58-201ENST00000291458 LRP12Q9Y561 859 aa8.19□□□□□ -1.1
CCDC58-201ENST00000291458 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.18□□□□□ -1.1
CCDC58-201ENST00000291458 hCG_38984A0A1B0GV85 526 aa8.18□□□□□ -1.1
CCDC58-201ENST00000291458 CCDC182A6NF36 153 aa8.18□□□□□ -1.1
CCDC58-201ENST00000291458 ANKRD30BLA7E2S9 258 aa8.18□□□□□ -1.1
CCDC58-201ENST00000291458 F5H0A9 414 aaPredicted RBP8.18□□□□□ -1.1
CCDC58-201ENST00000291458 TRAPPC2LH3BP13 241 aa8.18□□□□□ -1.1
CCDC58-201ENST00000291458 PRODHO43272 600 aa8.18□□□□□ -1.1
CCDC58-201ENST00000291458 VENTXO95231 258 aa8.18□□□□□ -1.1
CCDC58-201ENST00000291458 APOL3O95236 402 aa8.18□□□□□ -1.1
CCDC58-201ENST00000291458 HOXB6P17509 224 aaKnown RBP8.18□□□□□ -1.1
CCDC58-201ENST00000291458 EGR1P18146 543 aa8.18□□□□□ -1.1
CCDC58-201ENST00000291458 SLC2A5P22732 501 aa8.18□□□□□ -1.1
CCDC58-201ENST00000291458 FASP25445 335 aa8.18□□□□□ -1.1
CCDC58-201ENST00000291458 EPHA2P29317 976 aa8.18□□□□□ -1.1
CCDC58-201ENST00000291458 GNALP38405 381 aa8.18□□□□□ -1.1
CCDC58-201ENST00000291458 CD200P41217 278 aa8.18□□□□□ -1.1
CCDC58-201ENST00000291458 PITPNBP48739 271 aa8.18□□□□□ -1.1
CCDC58-201ENST00000291458 CSNK2BP67870 215 aa8.18□□□□□ -1.1
CCDC58-201ENST00000291458 PCK2Q16822 640 aa8.18□□□□□ -1.1
CCDC58-201ENST00000291458 DMRTC1Q5HYR2 192 aa8.18□□□□□ -1.1
CCDC58-201ENST00000291458 LCN1P1Q5VSP4 162 aa8.18□□□□□ -1.1
CCDC58-201ENST00000291458 LIPNQ5VXI9 398 aa8.18□□□□□ -1.1
CCDC58-201ENST00000291458 FAHD1Q6P587 224 aa8.18□□□□□ -1.1
CCDC58-201ENST00000291458 PLEKHG7Q6ZR37 379 aa8.18□□□□□ -1.1
CCDC58-201ENST00000291458 KCTD8Q6ZWB6 473 aa8.18□□□□□ -1.1
CCDC58-201ENST00000291458 NLRC3Q7RTR2 1065 aa8.18□□□□□ -1.1
CCDC58-201ENST00000291458 KRT77Q7Z794 578 aa8.18□□□□□ -1.1
CCDC58-201ENST00000291458 BPIFB2Q8N4F0 458 aa8.18□□□□□ -1.1
CCDC58-201ENST00000291458 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.18□□□□□ -1.1
CCDC58-201ENST00000291458 TCEANCQ8N8B7 351 aa8.18□□□□□ -1.1
CCDC58-201ENST00000291458 OTOSQ8NHW6 89 aa8.18□□□□□ -1.1
CCDC58-201ENST00000291458 FAM81AQ8TBF8 368 aa8.18□□□□□ -1.1
CCDC58-201ENST00000291458 PYDC1Q8WXC3 89 aa8.18□□□□□ -1.1
CCDC58-201ENST00000291458 IL4I1Q96RQ9 567 aa8.18□□□□□ -1.1
CCDC58-201ENST00000291458 SSBP3Q9BWW4 388 aaPredicted RBP8.18□□□□□ -1.1
CCDC58-201ENST00000291458 TOR3AQ9H497 397 aa8.18□□□□□ -1.1
CCDC58-201ENST00000291458 ZNF319Q9P2F9 582 aa8.18□□□□□ -1.1
CCDC58-201ENST00000291458 IKZF2Q9UKS7 526 aa8.18□□□□□ -1.1
CCDC58-201ENST00000291458 COPS3Q9UNS2 423 aa8.18□□□□□ -1.1
CCDC58-201ENST00000291458 AP4S1Q9Y587 144 aa8.18□□□□□ -1.1
CCDC58-201ENST00000291458 TRAV40A0A0B4J280 105 aa8.17□□□□□ -1.1
CCDC58-201ENST00000291458 PRR32B1ATL7 298 aa8.17□□□□□ -1.1
CCDC58-201ENST00000291458 G3V2T6 193 aa8.17□□□□□ -1.1
CCDC58-201ENST00000291458 IFNL4K9M1U5 179 aa8.17□□□□□ -1.1
CCDC58-201ENST00000291458 MAGEB4O15481 346 aaPredicted RBP8.17□□□□□ -1.1
CCDC58-201ENST00000291458 ATP5HO75947 161 aa8.17□□□□□ -1.1
CCDC58-201ENST00000291458 GYPAP02724 150 aa8.17□□□□□ -1.1
CCDC58-201ENST00000291458 ACTG1P63261 375 aa8.17□□□□□ -1.1
CCDC58-201ENST00000291458 ELF3P78545 371 aaPredicted RBP8.17□□□□□ -1.1
CCDC58-201ENST00000291458 FAM3AP98173 230 aa8.17□□□□□ -1.1
CCDC58-201ENST00000291458 ZNF154Q13106 437 aa8.17□□□□□ -1.1
CCDC58-201ENST00000291458 PTGES3Q15185 160 aaKnown RBP8.17□□□□□ -1.1
CCDC58-201ENST00000291458 ZNF404Q494X3 552 aa8.17□□□□□ -1.1
CCDC58-201ENST00000291458 SLC35D3Q5M8T2 416 aa8.17□□□□□ -1.1
CCDC58-201ENST00000291458 CCDC121Q6ZUS5 278 aa8.17□□□□□ -1.1
CCDC58-201ENST00000291458 OR8B12Q8NGG6 310 aa8.17□□□□□ -1.1
CCDC58-201ENST00000291458 SPATA3Q8NHX4 192 aa8.17□□□□□ -1.1
CCDC58-201ENST00000291458 NANPQ8TBE9 248 aa8.17□□□□□ -1.1
CCDC58-201ENST00000291458 ZNF418Q8TF45 676 aaPredicted RBP8.17□□□□□ -1.1
CCDC58-201ENST00000291458 LRRC29Q8WV35 223 aa8.17□□□□□ -1.1
CCDC58-201ENST00000291458 DNAJC9Q8WXX5 260 aa8.17□□□□□ -1.1
CCDC58-201ENST00000291458 SGK3Q96BR1 496 aa8.17□□□□□ -1.1
CCDC58-201ENST00000291458 NEIL1Q96FI4 390 aaPredicted RBP8.17□□□□□ -1.1
CCDC58-201ENST00000291458 DUX5Q96PT3 197 aa8.17□□□□□ -1.1
CCDC58-201ENST00000291458 CNN2Q99439 309 aaKnown RBP8.17□□□□□ -1.1
CCDC58-201ENST00000291458 TBX5Q99593 518 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms