RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 OR2T2Q6IF00 324 aa18.69■□□□□ 0.58
PDLIM3-203ENST00000284771 UNQ9370/PRO34162Q6UXP9 181 aa18.69■□□□□ 0.58
PDLIM3-203ENST00000284771 MRPL21Q7Z2W9 205 aaKnown RBP18.69■□□□□ 0.58
PDLIM3-203ENST00000284771 PPP1R3EQ9H7J1 279 aa18.69■□□□□ 0.58
PDLIM3-203ENST00000284771 TUBG2Q9NRH3 451 aa18.69■□□□□ 0.58
PDLIM3-203ENST00000284771 ZNF275Q9NSD4 429 aaPredicted RBP18.69■□□□□ 0.58
PDLIM3-203ENST00000284771 MYEF2Q9P2K5 600 aaKnown RBP18.69■□□□□ 0.58
PDLIM3-203ENST00000284771 PIN1P1O15428 100 aa18.68■□□□□ 0.58
PDLIM3-203ENST00000284771 ADIPOQQ15848 244 aa18.68■□□□□ 0.58
PDLIM3-203ENST00000284771 ZNF718Q3SXZ3 478 aa18.68■□□□□ 0.58
PDLIM3-203ENST00000284771 Q499Y3 187 aa18.68■□□□□ 0.58
PDLIM3-203ENST00000284771 ASPHD2Q6ICH7 369 aa18.68■□□□□ 0.58
PDLIM3-203ENST00000284771 ADAT3Q96EY9 351 aaPredicted RBP18.68■□□□□ 0.58
PDLIM3-203ENST00000284771 MRPL37Q9BZE1 423 aaKnown RBP18.68■□□□□ 0.58
PDLIM3-203ENST00000284771 ZNF442Q9H7R0 627 aa18.68■□□□□ 0.58
PDLIM3-203ENST00000284771 ANKRD61A6NGH8 418 aa18.67■□□□□ 0.58
PDLIM3-203ENST00000284771 ZNF879B4DU55 563 aa18.67■□□□□ 0.58
PDLIM3-203ENST00000284771 GABRPO00591 440 aa18.67■□□□□ 0.58
PDLIM3-203ENST00000284771 ZNF672Q499Z4 452 aaPredicted RBP18.67■□□□□ 0.58
PDLIM3-203ENST00000284771 GPR107Q5VW38 600 aa18.67■□□□□ 0.58
PDLIM3-203ENST00000284771 SLC16A12Q6ZSM3 486 aa18.67■□□□□ 0.58
PDLIM3-203ENST00000284771 OR56B2PQ8NGI1 322 aa18.67■□□□□ 0.58
PDLIM3-203ENST00000284771 TMEM106AQ96A25 262 aa18.67■□□□□ 0.58
PDLIM3-203ENST00000284771 CISD1Q9NZ45 108 aaKnown RBP18.67■□□□□ 0.58
PDLIM3-203ENST00000284771 DUSP13Q9UII6 198 aa18.67■□□□□ 0.58
PDLIM3-203ENST00000284771 IGLV3-9A0A075B6K5 115 aa18.66■□□□□ 0.58
PDLIM3-203ENST00000284771 CD300LBA8K4G0 201 aa18.66■□□□□ 0.58
PDLIM3-203ENST00000284771 H3BSA7 217 aa18.66■□□□□ 0.58
PDLIM3-203ENST00000284771 MTRF1O75570 445 aaKnown RBP18.66■□□□□ 0.58
PDLIM3-203ENST00000284771 HLA-DPB1P04440 258 aa18.66■□□□□ 0.58
PDLIM3-203ENST00000284771 FAHP16930 419 aa18.66■□□□□ 0.58
PDLIM3-203ENST00000284771 CFL1P23528 166 aaKnown RBP18.66■□□□□ 0.58
PDLIM3-203ENST00000284771 ZMAT1Q5H9K5 638 aa18.66■□□□□ 0.58
PDLIM3-203ENST00000284771 BHLHE23Q8NDY6 225 aa18.66■□□□□ 0.58
PDLIM3-203ENST00000284771 SEMA6DQ8NFY4 1073 aa18.66■□□□□ 0.58
PDLIM3-203ENST00000284771 OR13C3Q8NGS6 347 aa18.66■□□□□ 0.58
PDLIM3-203ENST00000284771 SYNPRQ8TBG9 265 aa18.66■□□□□ 0.58
PDLIM3-203ENST00000284771 TSEN15Q8WW01 171 aaKnown RBP18.66■□□□□ 0.58
PDLIM3-203ENST00000284771 MRPL24Q96A35 216 aaKnown RBP18.66■□□□□ 0.58
PDLIM3-203ENST00000284771 FGGYQ96C11 551 aa18.66■□□□□ 0.58
PDLIM3-203ENST00000284771 DERL3Q96Q80 235 aa18.66■□□□□ 0.58
PDLIM3-203ENST00000284771 SYT3Q9BQG1 590 aa18.66■□□□□ 0.58
PDLIM3-203ENST00000284771 OPA3Q9H6K4 179 aa18.66■□□□□ 0.58
PDLIM3-203ENST00000284771 RNF167Q9H6Y7 350 aa18.66■□□□□ 0.58
PDLIM3-203ENST00000284771 STUB1Q9UNE7 303 aa18.66■□□□□ 0.58
PDLIM3-203ENST00000284771 DHDHQ9UQ10 334 aa18.66■□□□□ 0.58
PDLIM3-203ENST00000284771 PIGLQ9Y2B2 252 aa18.66■□□□□ 0.58
PDLIM3-203ENST00000284771 TRDV1A0A1B0GX56 115 aa18.66■□□□□ 0.58
PDLIM3-203ENST00000284771 OR4A8P0C604 315 aa18.66■□□□□ 0.58
PDLIM3-203ENST00000284771 GCH1P30793 250 aa18.66■□□□□ 0.58
PDLIM3-203ENST00000284771 RPS23P62266 143 aaKnown RBP18.66■□□□□ 0.58
PDLIM3-203ENST00000284771 TRAM1Q15629 374 aa18.66■□□□□ 0.58
PDLIM3-203ENST00000284771 DMRTC1Q5HYR2 192 aa18.66■□□□□ 0.58
PDLIM3-203ENST00000284771 CEACAM19Q7Z692 300 aa18.66■□□□□ 0.58
PDLIM3-203ENST00000284771 OR5AS1Q8N127 324 aa18.66■□□□□ 0.58
PDLIM3-203ENST00000284771 CHCHD6Q9BRQ6 235 aa18.66■□□□□ 0.58
PDLIM3-203ENST00000284771 PURGQ9UJV8 347 aaKnown RBP18.66■□□□□ 0.58
PDLIM3-203ENST00000284771 CMAHPQ9Y471 501 aa18.66■□□□□ 0.58
PDLIM3-203ENST00000284771 GGT3PA6NGU5 568 aa18.65■□□□□ 0.58
PDLIM3-203ENST00000284771 CTAG2O75638 210 aa18.65■□□□□ 0.58
PDLIM3-203ENST00000284771 RGS9O75916 674 aaPredicted RBP18.65■□□□□ 0.58
PDLIM3-203ENST00000284771 IGHV3-13P01766 116 aa18.65■□□□□ 0.58
PDLIM3-203ENST00000284771 KITLGP21583 273 aa18.65■□□□□ 0.58
PDLIM3-203ENST00000284771 MAP2K3P46734 347 aa18.65■□□□□ 0.58
PDLIM3-203ENST00000284771 ANKRD13BQ86YJ7 626 aa18.65■□□□□ 0.58
PDLIM3-203ENST00000284771 CENPOQ9BU64 300 aa18.65■□□□□ 0.58
PDLIM3-203ENST00000284771 NOX4Q9NPH5 578 aa18.65■□□□□ 0.58
PDLIM3-203ENST00000284771 TXNL4BQ9NX01 149 aaKnown RBP18.65■□□□□ 0.58
PDLIM3-203ENST00000284771 RHBDD3Q9Y3P4 386 aa18.65■□□□□ 0.58
PDLIM3-203ENST00000284771 TRBV5-7A0A0A0MS05 114 aa18.64■□□□□ 0.57
PDLIM3-203ENST00000284771 DPPA5A6NC42 116 aa18.64■□□□□ 0.57
PDLIM3-203ENST00000284771 DHRS7CA6NNS2 312 aa18.64■□□□□ 0.57
PDLIM3-203ENST00000284771 IQCF6A8MYZ5 107 aa18.64■□□□□ 0.57
PDLIM3-203ENST00000284771 TTKP33981 857 aa18.64■□□□□ 0.57
PDLIM3-203ENST00000284771 TGFBR1P36897 503 aa18.64■□□□□ 0.57
PDLIM3-203ENST00000284771 RIPPLY1Q0D2K3 151 aa18.64■□□□□ 0.57
PDLIM3-203ENST00000284771 KRT74Q7RTS7 529 aa18.64■□□□□ 0.57
PDLIM3-203ENST00000284771 ZNF295-AS1Q8N0V1 137 aa18.64■□□□□ 0.57
PDLIM3-203ENST00000284771 PARP16Q8N5Y8 322 aa18.64■□□□□ 0.57
PDLIM3-203ENST00000284771 SERPINA3P01011 423 aa18.63■□□□□ 0.57
PDLIM3-203ENST00000284771 COX6B1P14854 86 aa18.63■□□□□ 0.57
PDLIM3-203ENST00000284771 FGF9P31371 208 aaPredicted RBP18.63■□□□□ 0.57
PDLIM3-203ENST00000284771 APOBEC3AP31941 199 aaPredicted RBP18.63■□□□□ 0.57
PDLIM3-203ENST00000284771 CTF1Q16619 201 aa18.63■□□□□ 0.57
PDLIM3-203ENST00000284771 MST1LQ2TV78 715 aa18.63■□□□□ 0.57
PDLIM3-203ENST00000284771 C22orf42Q6IC83 251 aa18.63■□□□□ 0.57
PDLIM3-203ENST00000284771 CLVS1Q8IUQ0 354 aaPredicted RBP18.63■□□□□ 0.57
PDLIM3-203ENST00000284771 RBM38Q9H0Z9 239 aaKnown RBP18.63■□□□□ 0.57
PDLIM3-203ENST00000284771 EXOSC4Q9NPD3 245 aaKnown RBP18.63■□□□□ 0.57
PDLIM3-203ENST00000284771 PLEKHB1Q9UF11 243 aaPredicted RBP18.63■□□□□ 0.57
PDLIM3-203ENST00000284771 CEPT1Q9Y6K0 416 aa18.63■□□□□ 0.57
PDLIM3-203ENST00000284771 LOC100506127A0A0U1RQW1 187 aa18.63■□□□□ 0.57
PDLIM3-203ENST00000284771 SHISA3A0PJX4 238 aa18.63■□□□□ 0.57
PDLIM3-203ENST00000284771 AIREO43918 545 aa18.63■□□□□ 0.57
PDLIM3-203ENST00000284771 GATBO75879 557 aaKnown RBP18.63■□□□□ 0.57
PDLIM3-203ENST00000284771 UCHL1P09936 223 aa18.63■□□□□ 0.57
PDLIM3-203ENST00000284771 ZNF12P17014 697 aa18.63■□□□□ 0.57
PDLIM3-203ENST00000284771 GALP22466 123 aa18.63■□□□□ 0.57
PDLIM3-203ENST00000284771 SERPINF1P36955 418 aa18.63■□□□□ 0.57
PDLIM3-203ENST00000284771 DDOSTP39656 456 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms