RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 TNK1Q13470 666 aa14.2□□□□□ -0.14
TPM1-201ENST00000267996 GSG1Q2KHT4 349 aa14.2□□□□□ -0.14
TPM1-201ENST00000267996 MDP1Q86V88 176 aa14.2□□□□□ -0.14
TPM1-201ENST00000267996 JAGN1Q8N5M9 183 aa14.2□□□□□ -0.14
TPM1-201ENST00000267996 OR4D6Q8NGJ1 314 aa14.2□□□□□ -0.14
TPM1-201ENST00000267996 S100A16Q96FQ6 103 aaKnown RBP14.2□□□□□ -0.14
TPM1-201ENST00000267996 CNTD2Q9H8S5 307 aa14.2□□□□□ -0.14
TPM1-201ENST00000267996 PIGLQ9Y2B2 252 aa14.2□□□□□ -0.14
TPM1-201ENST00000267996 ATMQ13315 3056 aa14.2□□□□□ -0.14
TPM1-201ENST00000267996 TMEM272A0A1B0GTI8 110 aa14.2□□□□□ -0.14
TPM1-201ENST00000267996 hCG_38984A0A1B0GV85 526 aa14.2□□□□□ -0.14
TPM1-201ENST00000267996 C1QTNF9BB2RNN3 333 aa14.2□□□□□ -0.14
TPM1-201ENST00000267996 SERPINA5P05154 406 aa14.2□□□□□ -0.14
TPM1-201ENST00000267996 C1QTNF9P0C862 333 aa14.2□□□□□ -0.14
TPM1-201ENST00000267996 TMIGD3P0DMS9 266 aaPredicted RBP14.2□□□□□ -0.14
TPM1-201ENST00000267996 FAHP16930 419 aa14.2□□□□□ -0.14
TPM1-201ENST00000267996 ACKR3P25106 362 aa14.2□□□□□ -0.14
TPM1-201ENST00000267996 MMP15P51511 669 aa14.2□□□□□ -0.14
TPM1-201ENST00000267996 PER3P56645 1201 aa14.2□□□□□ -0.14
TPM1-201ENST00000267996 PITPNAQ00169 270 aa14.2□□□□□ -0.14
TPM1-201ENST00000267996 ASAH1Q13510 395 aa14.2□□□□□ -0.14
TPM1-201ENST00000267996 SEMA6DQ8NFY4 1073 aa14.2□□□□□ -0.14
TPM1-201ENST00000267996 AKAP1Q92667 903 aaKnown RBP eCLIP14.2□□□□□ -0.14
TPM1-201ENST00000267996 PTX4Q96A99 478 aa14.2□□□□□ -0.14
TPM1-201ENST00000267996 NKX3-1Q99801 234 aaPredicted RBP14.2□□□□□ -0.14
TPM1-201ENST00000267996 PROCRQ9UNN8 238 aa14.2□□□□□ -0.14
TPM1-201ENST00000267996 PIEZO2Q9H5I5 2752 aa14.19□□□□□ -0.14
TPM1-201ENST00000267996 CACNA1AO00555 2505 aa14.19□□□□□ -0.14
TPM1-201ENST00000267996 C5orf49A4QMS7 147 aa14.19□□□□□ -0.14
TPM1-201ENST00000267996 OCMP0CE72 109 aaPredicted RBP14.19□□□□□ -0.14
TPM1-201ENST00000267996 ARSBP15848 533 aa14.19□□□□□ -0.14
TPM1-201ENST00000267996 CEACAM8P31997 349 aaPredicted RBP14.19□□□□□ -0.14
TPM1-201ENST00000267996 MAP2K3P46734 347 aa14.19□□□□□ -0.14
TPM1-201ENST00000267996 PTH2RP49190 550 aa14.19□□□□□ -0.14
TPM1-201ENST00000267996 EFNB2P52799 333 aa14.19□□□□□ -0.14
TPM1-201ENST00000267996 FAM3AP98173 230 aa14.19□□□□□ -0.14
TPM1-201ENST00000267996 ZNF92Q03936 586 aa14.19□□□□□ -0.14
TPM1-201ENST00000267996 RIPPLY1Q0D2K3 151 aa14.19□□□□□ -0.14
TPM1-201ENST00000267996 OR8B8Q15620 311 aa14.19□□□□□ -0.14
TPM1-201ENST00000267996 UBE2V2Q15819 145 aa14.19□□□□□ -0.14
TPM1-201ENST00000267996 TRIQKQ629K1 86 aa14.19□□□□□ -0.14
TPM1-201ENST00000267996 TMEM42Q69YG0 159 aa14.19□□□□□ -0.14
TPM1-201ENST00000267996 BIVMQ86UB2 503 aa14.19□□□□□ -0.14
TPM1-201ENST00000267996 ZNF610Q8N9Z0 462 aa14.19□□□□□ -0.14
TPM1-201ENST00000267996 TRIM63Q969Q1 353 aa14.19□□□□□ -0.14
TPM1-201ENST00000267996 ITFG2Q969R8 447 aa14.19□□□□□ -0.14
TPM1-201ENST00000267996 FBLN5Q9UBX5 448 aa14.19□□□□□ -0.14
TPM1-201ENST00000267996 TLN1Q9Y490 2541 aaKnown RBP14.18□□□□□ -0.14
TPM1-201ENST00000267996 PLA2G10O15496 165 aa14.18□□□□□ -0.14
TPM1-201ENST00000267996 GSTZ1O43708 216 aaPredicted RBP14.18□□□□□ -0.14
TPM1-201ENST00000267996 RAD51DO75771 328 aa14.18□□□□□ -0.14
TPM1-201ENST00000267996 LYZL6O75951 148 aa14.18□□□□□ -0.14
TPM1-201ENST00000267996 CDK2P24941 298 aa14.18□□□□□ -0.14
TPM1-201ENST00000267996 ZNF93P35789 620 aaPredicted RBP14.18□□□□□ -0.14
TPM1-201ENST00000267996 GSK3AP49840 483 aa14.18□□□□□ -0.14
TPM1-201ENST00000267996 GDPD3Q7L5L3 318 aa14.18□□□□□ -0.14
TPM1-201ENST00000267996 RPRMLQ8N4K4 120 aa14.18□□□□□ -0.14
TPM1-201ENST00000267996 NAXEQ8NCW5 288 aa14.18□□□□□ -0.14
TPM1-201ENST00000267996 APOBEC3DQ96AK3 386 aaPredicted RBP14.18□□□□□ -0.14
TPM1-201ENST00000267996 SNRNP40Q96DI7 357 aaKnown RBP14.18□□□□□ -0.14
TPM1-201ENST00000267996 KCNK15Q9H427 330 aa14.18□□□□□ -0.14
TPM1-201ENST00000267996 ZNF835Q9Y2P0 537 aa14.18□□□□□ -0.14
TPM1-201ENST00000267996 CIB4A0PJX0 185 aa14.17□□□□□ -0.14
TPM1-201ENST00000267996 XRCC3O43542 346 aa14.17□□□□□ -0.14
TPM1-201ENST00000267996 CTAG2O75638 210 aa14.17□□□□□ -0.14
TPM1-201ENST00000267996 BPNT1O95861 308 aa14.17□□□□□ -0.14
TPM1-201ENST00000267996 IL2RAP01589 272 aa14.17□□□□□ -0.14
TPM1-201ENST00000267996 ZNF14P17017 642 aaPredicted RBP14.17□□□□□ -0.14
TPM1-201ENST00000267996 RAB6AP20340 208 aa14.17□□□□□ -0.14
TPM1-201ENST00000267996 APLNRP35414 380 aa14.17□□□□□ -0.14
TPM1-201ENST00000267996 RANBP1P43487 201 aa14.17□□□□□ -0.14
TPM1-201ENST00000267996 UBE2NP61088 152 aaKnown RBP14.17□□□□□ -0.14
TPM1-201ENST00000267996 QRFPP83859 136 aa14.17□□□□□ -0.14
TPM1-201ENST00000267996 P2RY6Q15077 328 aa14.17□□□□□ -0.14
TPM1-201ENST00000267996 TAB1Q15750 504 aa14.17□□□□□ -0.14
TPM1-201ENST00000267996 ZBTB37Q5TC79 503 aa14.17□□□□□ -0.14
TPM1-201ENST00000267996 CRIP3Q6Q6R5 217 aa14.17□□□□□ -0.14
TPM1-201ENST00000267996 KRT74Q7RTS7 529 aa14.17□□□□□ -0.14
TPM1-201ENST00000267996 RNF144BQ7Z419 303 aa14.17□□□□□ -0.14
TPM1-201ENST00000267996 DOLPP1Q86YN1 238 aa14.17□□□□□ -0.14
TPM1-201ENST00000267996 IZUMO1Q8IYV9 350 aa14.17□□□□□ -0.14
TPM1-201ENST00000267996 THAP7Q9BT49 309 aaPredicted RBP14.17□□□□□ -0.14
TPM1-201ENST00000267996 REPIN1Q9BWE0 567 aaKnown RBP14.17□□□□□ -0.14
TPM1-201ENST00000267996 TP63Q9H3D4 680 aaPredicted RBP14.17□□□□□ -0.14
TPM1-201ENST00000267996 MAGEB3O15480 346 aa14.17□□□□□ -0.14
TPM1-201ENST00000267996 LANCL1O43813 399 aa14.17□□□□□ -0.14
TPM1-201ENST00000267996 GLI4P10075 376 aa14.17□□□□□ -0.14
TPM1-201ENST00000267996 CCL2P13500 99 aa14.17□□□□□ -0.14
TPM1-201ENST00000267996 RFX2P48378 723 aa14.17□□□□□ -0.14
TPM1-201ENST00000267996 TMEM69Q5SWH9 247 aa14.17□□□□□ -0.14
TPM1-201ENST00000267996 HACD4Q5VWC8 232 aa14.17□□□□□ -0.14
TPM1-201ENST00000267996 UNQ6494/PRO21346Q6UXR6 183 aa14.17□□□□□ -0.14
TPM1-201ENST00000267996 WDR31Q8NA23 367 aa14.17□□□□□ -0.14
TPM1-201ENST00000267996 C19orf18Q8NEA5 215 aa14.17□□□□□ -0.14
TPM1-201ENST00000267996 C15orf40Q8WUR7 153 aa14.17□□□□□ -0.14
TPM1-201ENST00000267996 SMIM4Q8WVI0 70 aa14.17□□□□□ -0.14
TPM1-201ENST00000267996 YIPF5Q969M3 257 aa14.17□□□□□ -0.14
TPM1-201ENST00000267996 RFT1Q96AA3 541 aa14.17□□□□□ -0.14
TPM1-201ENST00000267996 MS4A3Q96HJ5 214 aa14.17□□□□□ -0.14
TPM1-201ENST00000267996 OPN3Q9H1Y3 402 aaPredicted RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms