RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 GABARAPH6UMI1 98 aa12.78□□□□□ -0.36
PDLIM2-201ENST00000265810 TRAF3IP2O43734 574 aaPredicted RBP12.78□□□□□ -0.36
PDLIM2-201ENST00000265810 PGA4P0DJD7 388 aa12.78□□□□□ -0.36
PDLIM2-201ENST00000265810 PGA3P0DJD8 388 aa12.78□□□□□ -0.36
PDLIM2-201ENST00000265810 PRKACAP17612 351 aa12.78□□□□□ -0.36
PDLIM2-201ENST00000265810 DNASE1P24855 282 aa12.78□□□□□ -0.36
PDLIM2-201ENST00000265810 CCR6P51684 374 aa12.78□□□□□ -0.36
PDLIM2-201ENST00000265810 RBM39Q14498 530 aaKnown RBP12.78□□□□□ -0.36
PDLIM2-201ENST00000265810 FNDC7Q5VTL7 733 aa12.78□□□□□ -0.36
PDLIM2-201ENST00000265810 BEND4Q6ZU67 534 aa12.78□□□□□ -0.36
PDLIM2-201ENST00000265810 ELMOD2Q8IZ81 293 aa12.78□□□□□ -0.36
PDLIM2-201ENST00000265810 COQ8AQ8NI60 647 aa12.78□□□□□ -0.36
PDLIM2-201ENST00000265810 AMELYQ99218 206 aa12.78□□□□□ -0.36
PDLIM2-201ENST00000265810 PPA2Q9H2U2 334 aa12.78□□□□□ -0.36
PDLIM2-201ENST00000265810 CNOT4O95628 575 aaKnown RBP12.77□□□□□ -0.36
PDLIM2-201ENST00000265810 CST2P09228 141 aa12.77□□□□□ -0.36
PDLIM2-201ENST00000265810 PLEKHN1Q494U1 663 aaPredicted RBP12.77□□□□□ -0.36
PDLIM2-201ENST00000265810 HIKESHIQ53FT3 197 aa12.77□□□□□ -0.36
PDLIM2-201ENST00000265810 FBXW9Q5XUX1 488 aa12.77□□□□□ -0.36
PDLIM2-201ENST00000265810 PLXDC2Q6UX71 529 aa12.77□□□□□ -0.36
PDLIM2-201ENST00000265810 DPPA2Q7Z7J5 298 aa12.77□□□□□ -0.36
PDLIM2-201ENST00000265810 OR51J1Q9H342 316 aa12.77□□□□□ -0.36
PDLIM2-201ENST00000265810 HS3ST1O14792 307 aa12.77□□□□□ -0.37
PDLIM2-201ENST00000265810 SPRY1O43609 319 aaPredicted RBP12.77□□□□□ -0.37
PDLIM2-201ENST00000265810 CLPSP04118 112 aa12.77□□□□□ -0.37
PDLIM2-201ENST00000265810 PTBP1P26599 531 aaKnown RBP eCLIP12.77□□□□□ -0.37
PDLIM2-201ENST00000265810 MPGP29372 298 aa12.77□□□□□ -0.37
PDLIM2-201ENST00000265810 SFRP5Q5T4F7 317 aa12.77□□□□□ -0.37
PDLIM2-201ENST00000265810 CFAP77Q6ZQR2 320 aa12.77□□□□□ -0.37
PDLIM2-201ENST00000265810 DECR2Q9NUI1 292 aa12.77□□□□□ -0.37
PDLIM2-201ENST00000265810 CLDN16Q9Y5I7 305 aa12.77□□□□□ -0.37
PDLIM2-201ENST00000265810 IGLV1-36A0A0B4J1U3 117 aa12.77□□□□□ -0.37
PDLIM2-201ENST00000265810 ZNF732B4DXR9 585 aa12.77□□□□□ -0.37
PDLIM2-201ENST00000265810 SLC22A5O76082 557 aa12.77□□□□□ -0.37
PDLIM2-201ENST00000265810 IL2RGP31785 369 aa12.77□□□□□ -0.37
PDLIM2-201ENST00000265810 NANOS3P60323 173 aaKnown RBP12.77□□□□□ -0.37
PDLIM2-201ENST00000265810 OR51A4Q8NGJ6 313 aa12.77□□□□□ -0.37
PDLIM2-201ENST00000265810 GMPPAQ96IJ6 420 aaPredicted RBP12.77□□□□□ -0.37
PDLIM2-201ENST00000265810 COL4A3Q01955 1670 aa12.76□□□□□ -0.37
PDLIM2-201ENST00000265810 TK1P04183 234 aa12.76□□□□□ -0.37
PDLIM2-201ENST00000265810 RAC2P15153 192 aa12.76□□□□□ -0.37
PDLIM2-201ENST00000265810 TAS2R46P59540 309 aa12.76□□□□□ -0.37
PDLIM2-201ENST00000265810 CELF2-AS1Q8N7Q2 184 aa12.76□□□□□ -0.37
PDLIM2-201ENST00000265810 OR51A2Q8NGJ7 313 aa12.76□□□□□ -0.37
PDLIM2-201ENST00000265810 HTTP42858 3142 aa12.76□□□□□ -0.37
PDLIM2-201ENST00000265810 TMPRSS3P57727 454 aa12.76□□□□□ -0.37
PDLIM2-201ENST00000265810 C19orf57Q0VDD7 668 aa12.76□□□□□ -0.37
PDLIM2-201ENST00000265810 FAM122BQ7Z309 247 aa12.76□□□□□ -0.37
PDLIM2-201ENST00000265810 ZNF573Q86YE8 665 aa12.76□□□□□ -0.37
PDLIM2-201ENST00000265810 ZNF519Q8TB69 540 aa12.76□□□□□ -0.37
PDLIM2-201ENST00000265810 C17orf50Q8WW18 174 aa12.76□□□□□ -0.37
PDLIM2-201ENST00000265810 LSM2Q9Y333 95 aaKnown RBP12.76□□□□□ -0.37
PDLIM2-201ENST00000265810 LRRK1Q38SD2 2015 aa12.76□□□□□ -0.37
PDLIM2-201ENST00000265810 A0A1W2PNV4 684 aa12.76□□□□□ -0.37
PDLIM2-201ENST00000265810 IL13RA1P78552 427 aa12.76□□□□□ -0.37
PDLIM2-201ENST00000265810 LTC4SQ16873 150 aa12.76□□□□□ -0.37
PDLIM2-201ENST00000265810 RGS7BPQ6MZT1 257 aaPredicted RBP12.76□□□□□ -0.37
PDLIM2-201ENST00000265810 TMEM91Q6ZNR0 172 aa12.76□□□□□ -0.37
PDLIM2-201ENST00000265810 BTLAQ7Z6A9 289 aa12.76□□□□□ -0.37
PDLIM2-201ENST00000265810 SGPP2Q8IWX5 399 aa12.76□□□□□ -0.37
PDLIM2-201ENST00000265810 CMTM1Q8IZ96 169 aa12.76□□□□□ -0.37
PDLIM2-201ENST00000265810 OR2B2Q9GZK3 357 aa12.76□□□□□ -0.37
PDLIM2-201ENST00000265810 ZNF703Q9H7S9 590 aaPredicted RBP12.76□□□□□ -0.37
PDLIM2-201ENST00000265810 RTTNQ86VV8 2226 aa12.76□□□□□ -0.37
PDLIM2-201ENST00000265810 PMP2P02689 132 aa12.76□□□□□ -0.37
PDLIM2-201ENST00000265810 MGMTP16455 207 aa12.76□□□□□ -0.37
PDLIM2-201ENST00000265810 RBMS2Q15434 407 aaKnown RBP12.76□□□□□ -0.37
PDLIM2-201ENST00000265810 BAK1Q16611 211 aa12.76□□□□□ -0.37
PDLIM2-201ENST00000265810 ALKBH6Q3KRA9 238 aa12.76□□□□□ -0.37
PDLIM2-201ENST00000265810 CCDC190Q86UF4 302 aa12.76□□□□□ -0.37
PDLIM2-201ENST00000265810 CATSPERDQ86XM0 798 aa12.76□□□□□ -0.37
PDLIM2-201ENST00000265810 SUMF1Q8NBK3 374 aa12.76□□□□□ -0.37
PDLIM2-201ENST00000265810 OR56B4Q8NH76 319 aa12.76□□□□□ -0.37
PDLIM2-201ENST00000265810 NUDCD2Q8WVJ2 157 aa12.76□□□□□ -0.37
PDLIM2-201ENST00000265810 PCDHB10Q9UN67 800 aa12.76□□□□□ -0.37
PDLIM2-201ENST00000265810 PLXNB3Q9ULL4 1909 aa12.75□□□□□ -0.37
PDLIM2-201ENST00000265810 FAM90A27PA6NNH2 459 aa12.75□□□□□ -0.37
PDLIM2-201ENST00000265810 H3BMH7 237 aa12.75□□□□□ -0.37
PDLIM2-201ENST00000265810 DEGS1O15121 323 aa12.75□□□□□ -0.37
PDLIM2-201ENST00000265810 PRAF2O60831 178 aa12.75□□□□□ -0.37
PDLIM2-201ENST00000265810 TCRBP04435 133 aa12.75□□□□□ -0.37
PDLIM2-201ENST00000265810 PVALBP20472 110 aaPredicted RBP12.75□□□□□ -0.37
PDLIM2-201ENST00000265810 GPM6AP51674 278 aa12.75□□□□□ -0.37
PDLIM2-201ENST00000265810 FUT6P51993 359 aa12.75□□□□□ -0.37
PDLIM2-201ENST00000265810 OR8B8Q15620 311 aa12.75□□□□□ -0.37
PDLIM2-201ENST00000265810 KISS1Q15726 138 aa12.75□□□□□ -0.37
PDLIM2-201ENST00000265810 PAN3Q58A45 887 aaKnown RBP12.75□□□□□ -0.37
PDLIM2-201ENST00000265810 OR52N4Q8NGI2 321 aa12.75□□□□□ -0.37
PDLIM2-201ENST00000265810 RDH5Q92781 318 aa12.75□□□□□ -0.37
PDLIM2-201ENST00000265810 NPAS1Q99742 590 aa12.75□□□□□ -0.37
PDLIM2-201ENST00000265810 OR2H1Q9GZK4 316 aa12.75□□□□□ -0.37
PDLIM2-201ENST00000265810 MRPL22Q9NWU5 206 aaKnown RBP12.75□□□□□ -0.37
PDLIM2-201ENST00000265810 POLDIP2Q9Y2S7 368 aa12.75□□□□□ -0.37
PDLIM2-201ENST00000265810 OR2AT4A6NND4 320 aa12.75□□□□□ -0.37
PDLIM2-201ENST00000265810 DDOSTP39656 456 aa12.75□□□□□ -0.37
PDLIM2-201ENST00000265810 MMP16P51512 607 aa12.75□□□□□ -0.37
PDLIM2-201ENST00000265810 ZNF133P52736 654 aaPredicted RBP12.75□□□□□ -0.37
PDLIM2-201ENST00000265810 FADS6Q8N9I5 356 aa12.75□□□□□ -0.37
PDLIM2-201ENST00000265810 OR2T35Q8NGX2 323 aa12.75□□□□□ -0.37
PDLIM2-201ENST00000265810 PHB2Q99623 299 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms