RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 MRPS28Q9Y2Q9 187 aaKnown RBP9.79□□□□□ -0.84
MSH3-201ENST00000265081 MAB21L2Q9Y586 359 aa9.79□□□□□ -0.84
MSH3-201ENST00000265081 DHHO43323 396 aa9.79□□□□□ -0.84
MSH3-201ENST00000265081 S100A11P31949 105 aa9.79□□□□□ -0.84
MSH3-201ENST00000265081 NTF4P34130 210 aa9.79□□□□□ -0.84
MSH3-201ENST00000265081 OR3A4PP47883 348 aa9.79□□□□□ -0.84
MSH3-201ENST00000265081 PPA1Q15181 289 aa9.79□□□□□ -0.84
MSH3-201ENST00000265081 TMUB2Q71RG4 321 aa9.79□□□□□ -0.84
MSH3-201ENST00000265081 SULF2Q8IWU5 870 aa9.79□□□□□ -0.84
MSH3-201ENST00000265081 PSMF1Q92530 271 aa9.79□□□□□ -0.84
MSH3-201ENST00000265081 FBXO17Q96EF6 278 aa9.79□□□□□ -0.84
MSH3-201ENST00000265081 NICN1Q9BSH3 213 aa9.79□□□□□ -0.84
MSH3-201ENST00000265081 SLC39A1Q9NY26 324 aa9.79□□□□□ -0.84
MSH3-201ENST00000265081 A0A0G2JMM0 328 aa9.78□□□□□ -0.84
MSH3-201ENST00000265081 TEX51A0A1B0GUA7 166 aa9.78□□□□□ -0.84
MSH3-201ENST00000265081 A0A1W2PPB8 328 aa9.78□□□□□ -0.84
MSH3-201ENST00000265081 A0A1W2PRS3 328 aa9.78□□□□□ -0.84
MSH3-201ENST00000265081 KIR3DP1A8MWS1 328 aa9.78□□□□□ -0.84
MSH3-201ENST00000265081 GOSR2O14653 212 aa9.78□□□□□ -0.84
MSH3-201ENST00000265081 AMY2AP04746 511 aa9.78□□□□□ -0.84
MSH3-201ENST00000265081 ZNF20P17024 532 aa9.78□□□□□ -0.84
MSH3-201ENST00000265081 RTN4RL2Q86UN3 420 aa9.78□□□□□ -0.84
MSH3-201ENST00000265081 C12orf45Q8N5I9 185 aaPredicted RBP9.78□□□□□ -0.84
MSH3-201ENST00000265081 TMEM104Q8NE00 496 aa9.78□□□□□ -0.84
MSH3-201ENST00000265081 FBXW5Q969U6 566 aa9.78□□□□□ -0.84
MSH3-201ENST00000265081 CMBLQ96DG6 245 aa9.78□□□□□ -0.84
MSH3-201ENST00000265081 UCN2Q96RP3 112 aa9.78□□□□□ -0.84
MSH3-201ENST00000265081 GSX2Q9BZM3 304 aa9.78□□□□□ -0.84
MSH3-201ENST00000265081 RAD51DO75771 328 aa9.78□□□□□ -0.84
MSH3-201ENST00000265081 CLDN15P56746 228 aa9.78□□□□□ -0.84
MSH3-201ENST00000265081 FOXO1Q12778 655 aa9.78□□□□□ -0.84
MSH3-201ENST00000265081 PLA2G2CQ5R387 149 aa9.78□□□□□ -0.84
MSH3-201ENST00000265081 RIPPLY2Q5TAB7 128 aa9.78□□□□□ -0.84
MSH3-201ENST00000265081 AWAT2Q6E213 333 aa9.78□□□□□ -0.84
MSH3-201ENST00000265081 GLIPR1L1Q6UWM5 242 aa9.78□□□□□ -0.84
MSH3-201ENST00000265081 ABHD12BQ7Z5M8 362 aaPredicted RBP9.78□□□□□ -0.84
MSH3-201ENST00000265081 CLEC4MQ9H2X3 399 aaPredicted RBP9.78□□□□□ -0.84
MSH3-201ENST00000265081 DECR2Q9NUI1 292 aa9.78□□□□□ -0.84
MSH3-201ENST00000265081 A0A0B4J2A0 478 aa9.78□□□□□ -0.84
MSH3-201ENST00000265081 OR2AT4A6NND4 320 aa9.78□□□□□ -0.84
MSH3-201ENST00000265081 LYL1P12980 280 aa9.78□□□□□ -0.84
MSH3-201ENST00000265081 CBX5P45973 191 aa9.78□□□□□ -0.84
MSH3-201ENST00000265081 RAB35Q15286 201 aa9.78□□□□□ -0.84
MSH3-201ENST00000265081 OR8S1Q8NH09 359 aa9.78□□□□□ -0.84
MSH3-201ENST00000265081 CPT1CQ8TCG5 803 aa9.78□□□□□ -0.84
MSH3-201ENST00000265081 ELMOD3Q96FG2 381 aa9.78□□□□□ -0.84
MSH3-201ENST00000265081 LIN37Q96GY3 246 aaPredicted RBP9.78□□□□□ -0.84
MSH3-201ENST00000265081 HPF1Q9NWY4 346 aa9.78□□□□□ -0.84
MSH3-201ENST00000265081 SHPKQ9UHJ6 478 aa9.78□□□□□ -0.84
MSH3-201ENST00000265081 SEC16AO15027 2179 aa9.78□□□□□ -0.84
MSH3-201ENST00000265081 IGKV3D-15A0A087WSY6 115 aa9.77□□□□□ -0.84
MSH3-201ENST00000265081 TRBV6-7A0A0A0MS04 114 aa9.77□□□□□ -0.84
MSH3-201ENST00000265081 CDK2AP1O14519 115 aa9.77□□□□□ -0.84
MSH3-201ENST00000265081 EFSO43281 561 aa9.77□□□□□ -0.84
MSH3-201ENST00000265081 APOC1P02654 83 aa9.77□□□□□ -0.84
MSH3-201ENST00000265081 GNB3P16520 340 aa9.77□□□□□ -0.84
MSH3-201ENST00000265081 CD96P40200 585 aa9.77□□□□□ -0.84
MSH3-201ENST00000265081 EIF1AXP47813 144 aaKnown RBP9.77□□□□□ -0.84
MSH3-201ENST00000265081 CARD17Q5XLA6 110 aa9.77□□□□□ -0.84
MSH3-201ENST00000265081 RGS7BPQ6MZT1 257 aaPredicted RBP9.77□□□□□ -0.84
MSH3-201ENST00000265081 TIPARPQ7Z3E1 657 aaKnown RBP9.77□□□□□ -0.84
MSH3-201ENST00000265081 ARRDC1Q8N5I2 433 aa9.77□□□□□ -0.84
MSH3-201ENST00000265081 EIF4E3Q8N5X7 224 aaKnown RBP9.77□□□□□ -0.84
MSH3-201ENST00000265081 OR4S1Q8NGB4 309 aa9.77□□□□□ -0.84
MSH3-201ENST00000265081 HAS2Q92819 552 aa9.77□□□□□ -0.84
MSH3-201ENST00000265081 SEC61A2Q9H9S3 476 aa9.77□□□□□ -0.84
MSH3-201ENST00000265081 DKKL1Q9UK85 242 aa9.77□□□□□ -0.84
MSH3-201ENST00000265081 C9orf170A2RU37 121 aa9.77□□□□□ -0.85
MSH3-201ENST00000265081 MFSD2BA6NFX1 497 aa9.77□□□□□ -0.85
MSH3-201ENST00000265081 OPN1LWP04000 364 aa9.77□□□□□ -0.85
MSH3-201ENST00000265081 UBE2V2Q15819 145 aa9.77□□□□□ -0.85
MSH3-201ENST00000265081 TOR2AQ5JU69 321 aa9.77□□□□□ -0.85
MSH3-201ENST00000265081 GVQW1Q8N7I0 195 aa9.77□□□□□ -0.85
MSH3-201ENST00000265081 RELTQ969Z4 430 aa9.77□□□□□ -0.85
MSH3-201ENST00000265081 ATPIF1Q9UII2 106 aa9.77□□□□□ -0.85
MSH3-201ENST00000265081 TNFSF11O14788 317 aa9.77□□□□□ -0.85
MSH3-201ENST00000265081 RRP8O43159 456 aaKnown RBP9.77□□□□□ -0.85
MSH3-201ENST00000265081 STK17BO94768 372 aa9.77□□□□□ -0.85
MSH3-201ENST00000265081 SLC22A6Q4U2R8 563 aa9.77□□□□□ -0.85
MSH3-201ENST00000265081 DCAF12Q5T6F0 453 aa9.77□□□□□ -0.85
MSH3-201ENST00000265081 C3P1Q6ZMU1 363 aa9.77□□□□□ -0.85
MSH3-201ENST00000265081 FAM57BQ71RH2 274 aa9.77□□□□□ -0.85
MSH3-201ENST00000265081 OR56B1Q8NGI3 324 aa9.77□□□□□ -0.85
MSH3-201ENST00000265081 CT55Q8WUE5 264 aa9.77□□□□□ -0.85
MSH3-201ENST00000265081 ZNF391Q9UJN7 358 aa9.77□□□□□ -0.85
MSH3-201ENST00000265081 TNFSF18Q9UNG2 199 aa9.77□□□□□ -0.85
MSH3-201ENST00000265081 CYTIPO60759 359 aa9.77□□□□□ -0.85
MSH3-201ENST00000265081 SERPINA7P05543 415 aa9.77□□□□□ -0.85
MSH3-201ENST00000265081 GNALP38405 381 aa9.77□□□□□ -0.85
MSH3-201ENST00000265081 CHIAQ9BZP6 476 aa9.77□□□□□ -0.85
MSH3-201ENST00000265081 TMEM38BQ9NVV0 291 aa9.77□□□□□ -0.85
MSH3-201ENST00000265081 ASCC3Q8N3C0 2202 aaKnown RBP9.76□□□□□ -0.85
MSH3-201ENST00000265081 TNRC6AQ8NDV7 1962 aaKnown RBP9.76□□□□□ -0.85
MSH3-201ENST00000265081 LINC01387J3KSC0 135 aa9.76□□□□□ -0.85
MSH3-201ENST00000265081 L7N2F9 121 aa9.76□□□□□ -0.85
MSH3-201ENST00000265081 MSTNO14793 375 aa9.76□□□□□ -0.85
MSH3-201ENST00000265081 TOXO94900 526 aa9.76□□□□□ -0.85
MSH3-201ENST00000265081 DUS4LO95620 317 aaKnown RBP9.76□□□□□ -0.85
MSH3-201ENST00000265081 HRH1P35367 487 aa9.76□□□□□ -0.85
MSH3-201ENST00000265081 PTGFRP43088 359 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms