RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 CDKN2AP42771 156 aaKnown RBP11.7□□□□□ -0.54
NUP54-201ENST00000264883 RAB38P57729 211 aa11.7□□□□□ -0.54
NUP54-201ENST00000264883 ELOBQ15370 118 aa11.7□□□□□ -0.54
NUP54-201ENST00000264883 ITPRIPL2Q3MIP1 535 aa11.7□□□□□ -0.54
NUP54-201ENST00000264883 WDR38Q5JTN6 314 aa11.7□□□□□ -0.54
NUP54-201ENST00000264883 ASPHD2Q6ICH7 369 aa11.7□□□□□ -0.54
NUP54-201ENST00000264883 OR2T2Q6IF00 324 aa11.7□□□□□ -0.54
NUP54-201ENST00000264883 FOXRED2Q8IWF2 684 aa11.7□□□□□ -0.54
NUP54-201ENST00000264883 SMRP1Q8NCR6 262 aa11.7□□□□□ -0.54
NUP54-201ENST00000264883 M1APQ8TC57 530 aa11.7□□□□□ -0.54
NUP54-201ENST00000264883 Q8WTZ3 238 aa11.7□□□□□ -0.54
NUP54-201ENST00000264883 AQP3Q92482 292 aa11.7□□□□□ -0.54
NUP54-201ENST00000264883 NKD1Q969G9 470 aa11.7□□□□□ -0.54
NUP54-201ENST00000264883 C4orf45Q96LM5 186 aa11.7□□□□□ -0.54
NUP54-201ENST00000264883 C2orf50Q96LR7 162 aa11.7□□□□□ -0.54
NUP54-201ENST00000264883 JSRP1Q96MG2 331 aaPredicted RBP11.7□□□□□ -0.54
NUP54-201ENST00000264883 PBDC1Q9BVG4 233 aa11.7□□□□□ -0.54
NUP54-201ENST00000264883 SIRT7Q9NRC8 400 aa11.7□□□□□ -0.54
NUP54-201ENST00000264883 GSKIPQ9P0R6 139 aa11.7□□□□□ -0.54
NUP54-201ENST00000264883 CGGBP1Q9UFW8 167 aaPredicted RBP11.7□□□□□ -0.54
NUP54-201ENST00000264883 MRPS18BQ9Y676 258 aaKnown RBP11.7□□□□□ -0.54
NUP54-201ENST00000264883 EREGO14944 169 aa11.69□□□□□ -0.54
NUP54-201ENST00000264883 CTSVO60911 334 aa11.69□□□□□ -0.54
NUP54-201ENST00000264883 GAPDHP04406 335 aaKnown RBP11.69□□□□□ -0.54
NUP54-201ENST00000264883 QDPRP09417 244 aa11.69□□□□□ -0.54
NUP54-201ENST00000264883 CT62P0C5K7 136 aa11.69□□□□□ -0.54
NUP54-201ENST00000264883 FGF7P21781 194 aa11.69□□□□□ -0.54
NUP54-201ENST00000264883 PSG6Q00889 435 aa11.69□□□□□ -0.54
NUP54-201ENST00000264883 ENPP2Q13822 863 aa11.69□□□□□ -0.54
NUP54-201ENST00000264883 ZNF343Q6P1L6 599 aa11.69□□□□□ -0.54
NUP54-201ENST00000264883 FDX2Q6P4F2 183 aa11.69□□□□□ -0.54
NUP54-201ENST00000264883 NUP54Q7Z3B4 507 aa11.69□□□□□ -0.54
NUP54-201ENST00000264883 CA13Q8N1Q1 262 aa11.69□□□□□ -0.54
NUP54-201ENST00000264883 DOK4Q8TEW6 326 aa11.69□□□□□ -0.54
NUP54-201ENST00000264883 SLC26A1Q9H2B4 701 aa11.69□□□□□ -0.54
NUP54-201ENST00000264883 UNKLQ9H9P5 680 aaKnown RBP11.69□□□□□ -0.54
NUP54-201ENST00000264883 FBXL17Q9UF56 701 aa11.69□□□□□ -0.54
NUP54-201ENST00000264883 PRSS38A1L453 326 aa11.69□□□□□ -0.54
NUP54-201ENST00000264883 SYT7O43581 403 aa11.69□□□□□ -0.54
NUP54-201ENST00000264883 RAMP1O60894 148 aa11.69□□□□□ -0.54
NUP54-201ENST00000264883 SFT2D2O95562 160 aa11.69□□□□□ -0.54
NUP54-201ENST00000264883 TRGC2P03986 189 aa11.69□□□□□ -0.54
NUP54-201ENST00000264883 THBS4P35443 961 aa11.69□□□□□ -0.54
NUP54-201ENST00000264883 CAMLGP49069 296 aa11.69□□□□□ -0.54
NUP54-201ENST00000264883 DHPSP49366 369 aaPredicted RBP11.69□□□□□ -0.54
NUP54-201ENST00000264883 TCEA2Q15560 299 aa11.69□□□□□ -0.54
NUP54-201ENST00000264883 SOHLH1Q5JUK2 328 aa11.69□□□□□ -0.54
NUP54-201ENST00000264883 GGNBP1Q5YKI7 109 aa11.69□□□□□ -0.54
NUP54-201ENST00000264883 TMEM225Q6GV28 225 aa11.69□□□□□ -0.54
NUP54-201ENST00000264883 RPUSD3Q6P087 351 aaKnown RBP11.69□□□□□ -0.54
NUP54-201ENST00000264883 OPN5Q6U736 354 aa11.69□□□□□ -0.54
NUP54-201ENST00000264883 MED25Q71SY5 747 aa11.69□□□□□ -0.54
NUP54-201ENST00000264883 HOGA1Q86XE5 327 aa11.69□□□□□ -0.54
NUP54-201ENST00000264883 ZNF679Q8IYX0 411 aa11.69□□□□□ -0.54
NUP54-201ENST00000264883 POC1AQ8NBT0 407 aa11.69□□□□□ -0.54
NUP54-201ENST00000264883 OR6N2Q8NGY6 317 aa11.69□□□□□ -0.54
NUP54-201ENST00000264883 SMIM3Q9BZL3 60 aa11.69□□□□□ -0.54
NUP54-201ENST00000264883 WDR76Q9H967 626 aa11.69□□□□□ -0.54
NUP54-201ENST00000264883 SRA1Q9HD15 236 aaKnown RBP11.69□□□□□ -0.54
NUP54-201ENST00000264883 CKLFQ9UBR5 152 aa11.69□□□□□ -0.54
NUP54-201ENST00000264883 EYSQ5T1H1 3165 aa11.69□□□□□ -0.54
NUP54-201ENST00000264883 A0A1W2PP55 124 aa11.68□□□□□ -0.54
NUP54-201ENST00000264883 RPL12P30050 165 aaKnown RBP11.68□□□□□ -0.54
NUP54-201ENST00000264883 RPS27P42677 84 aaKnown RBP11.68□□□□□ -0.54
NUP54-201ENST00000264883 ZNF260Q3ZCT1 412 aa11.68□□□□□ -0.54
NUP54-201ENST00000264883 ZNF776Q68DI1 518 aaPredicted RBP11.68□□□□□ -0.54
NUP54-201ENST00000264883 CLEC18BQ6UXF7 455 aa11.68□□□□□ -0.54
NUP54-201ENST00000264883 NPSR1Q6W5P4 371 aa11.68□□□□□ -0.54
NUP54-201ENST00000264883 SUMF2Q8NBJ7 301 aa11.68□□□□□ -0.54
NUP54-201ENST00000264883 CHST4Q8NCG5 386 aa11.68□□□□□ -0.54
NUP54-201ENST00000264883 OR13C9Q8NGT0 318 aa11.68□□□□□ -0.54
NUP54-201ENST00000264883 ANKRD9Q96BM1 317 aaPredicted RBP11.68□□□□□ -0.54
NUP54-201ENST00000264883 INTS14Q96SY0 518 aa11.68□□□□□ -0.54
NUP54-201ENST00000264883 DDA1Q9BW61 102 aa11.68□□□□□ -0.54
NUP54-201ENST00000264883 NELFAQ9H3P2 528 aa11.68□□□□□ -0.54
NUP54-201ENST00000264883 Q9N2J8 555 aa11.68□□□□□ -0.54
NUP54-201ENST00000264883 LUZP4Q9P127 313 aa11.68□□□□□ -0.54
NUP54-201ENST00000264883 TBC1D29Q9UFV1 150 aa11.68□□□□□ -0.54
NUP54-201ENST00000264883 HS3ST3B1Q9Y662 390 aa11.68□□□□□ -0.54
NUP54-201ENST00000264883 SLCO1B1Q9Y6L6 691 aa11.68□□□□□ -0.54
NUP54-201ENST00000264883 SNRNP200O75643 2136 aaKnown RBP11.68□□□□□ -0.54
NUP54-201ENST00000264883 SPTBP11277 2137 aa11.68□□□□□ -0.54
NUP54-201ENST00000264883 DCDC2BA2VCK2 349 aa11.68□□□□□ -0.54
NUP54-201ENST00000264883 BLACEA4D250 179 aa11.68□□□□□ -0.54
NUP54-201ENST00000264883 C9J4A7 227 aa11.68□□□□□ -0.54
NUP54-201ENST00000264883 K7EPK0 472 aa11.68□□□□□ -0.54
NUP54-201ENST00000264883 SOX1O00570 391 aaPredicted RBP11.68□□□□□ -0.54
NUP54-201ENST00000264883 LDLRAD4O15165 306 aa11.68□□□□□ -0.54
NUP54-201ENST00000264883 CYB5BO43169 146 aa11.68□□□□□ -0.54
NUP54-201ENST00000264883 NUDT21O43809 227 aaKnown RBP11.68□□□□□ -0.54
NUP54-201ENST00000264883 GMFGO60234 142 aa11.68□□□□□ -0.54
NUP54-201ENST00000264883 CSTAP01040 98 aa11.68□□□□□ -0.54
NUP54-201ENST00000264883 HEXBP07686 556 aa11.68□□□□□ -0.54
NUP54-201ENST00000264883 S1PR1P21453 382 aa11.68□□□□□ -0.54
NUP54-201ENST00000264883 FCGR2CP31995 323 aa11.68□□□□□ -0.54
NUP54-201ENST00000264883 ACY1Q03154 408 aa11.68□□□□□ -0.54
NUP54-201ENST00000264883 RNF44Q7L0R7 432 aa11.68□□□□□ -0.54
NUP54-201ENST00000264883 ZNF761Q86XN6 746 aaPredicted RBP11.68□□□□□ -0.54
NUP54-201ENST00000264883 ZNF664Q8N3J9 261 aa11.68□□□□□ -0.54
NUP54-201ENST00000264883 FAM71E2Q8N5Q1 922 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms