RNA–Protein interactions for RNA: ENST00000263398.10

CD44-201, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 4,589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-201ENST00000263398 ADAM19Q9H013 955 aa9.68□□□□□ -0.86
CD44-201ENST00000263398 NIT2Q9NQR4 276 aa9.68□□□□□ -0.86
CD44-201ENST00000263398 MED9Q9NWA0 146 aa9.68□□□□□ -0.86
CD44-201ENST00000263398 SSUH2Q9Y2M2 353 aa9.68□□□□□ -0.86
CD44-201ENST00000263398 DOCK3Q8IZD9 2030 aa9.68□□□□□ -0.86
CD44-201ENST00000263398 hCG_1809904A0A1W2PP81 198 aa9.68□□□□□ -0.86
CD44-201ENST00000263398 A0A1W2PPE2 198 aa9.68□□□□□ -0.86
CD44-201ENST00000263398 A0A1W2PR64 198 aa9.68□□□□□ -0.86
CD44-201ENST00000263398 A0A1W2PRV1 198 aa9.68□□□□□ -0.86
CD44-201ENST00000263398 C5orf49A4QMS7 147 aa9.68□□□□□ -0.86
CD44-201ENST00000263398 NKX6-3A6NJ46 265 aa9.68□□□□□ -0.86
CD44-201ENST00000263398 WNT1P04628 370 aa9.68□□□□□ -0.86
CD44-201ENST00000263398 ABCD3P28288 659 aa9.68□□□□□ -0.86
CD44-201ENST00000263398 CCL11P51671 97 aa9.68□□□□□ -0.86
CD44-201ENST00000263398 SMAD4Q13485 552 aaKnown RBP9.68□□□□□ -0.86
CD44-201ENST00000263398 INSL4Q14641 139 aa9.68□□□□□ -0.86
CD44-201ENST00000263398 SLC10A1Q14973 349 aa9.68□□□□□ -0.86
CD44-201ENST00000263398 PRICKLE4Q2TBC4 344 aa9.68□□□□□ -0.86
CD44-201ENST00000263398 ZNF626Q68DY1 528 aa9.68□□□□□ -0.86
CD44-201ENST00000263398 FAM185AQ8N0U4 392 aa9.68□□□□□ -0.86
CD44-201ENST00000263398 ZNF439Q8NDP4 499 aa9.68□□□□□ -0.86
CD44-201ENST00000263398 OR8D4Q8NGM9 314 aa9.68□□□□□ -0.86
CD44-201ENST00000263398 LHX4Q969G2 390 aa9.68□□□□□ -0.86
CD44-201ENST00000263398 FOXQ1Q9C009 403 aa9.68□□□□□ -0.86
CD44-201ENST00000263398 GNG13Q9P2W3 67 aa9.68□□□□□ -0.86
CD44-201ENST00000263398 MEIKINA0A087WXM9 373 aa9.68□□□□□ -0.86
CD44-201ENST00000263398 LRRC30A6NM36 301 aa9.68□□□□□ -0.86
CD44-201ENST00000263398 DCTN6O00399 190 aa9.68□□□□□ -0.86
CD44-201ENST00000263398 FAHP16930 419 aa9.68□□□□□ -0.86
CD44-201ENST00000263398 IL3RAP26951 378 aa9.68□□□□□ -0.86
CD44-201ENST00000263398 C11orf87Q6NUJ2 197 aa9.68□□□□□ -0.86
CD44-201ENST00000263398 ZDHHC22Q8N966 263 aa9.68□□□□□ -0.86
CD44-201ENST00000263398 NOXO1Q8NFA2 376 aa9.68□□□□□ -0.86
CD44-201ENST00000263398 DLL4Q9NR61 685 aa9.68□□□□□ -0.86
CD44-201ENST00000263398 SLC23A1Q9UHI7 598 aa9.68□□□□□ -0.86
CD44-201ENST00000263398 NME1P15531 152 aaKnown RBP9.67□□□□□ -0.86
CD44-201ENST00000263398 AVPR2P30518 371 aa9.67□□□□□ -0.86
CD44-201ENST00000263398 P2RX3P56373 397 aa9.67□□□□□ -0.86
CD44-201ENST00000263398 RAB1AP62820 205 aa9.67□□□□□ -0.86
CD44-201ENST00000263398 HAGHQ16775 308 aa9.67□□□□□ -0.86
CD44-201ENST00000263398 ZNF468Q5VIY5 522 aaPredicted RBP9.67□□□□□ -0.86
CD44-201ENST00000263398 LCN15Q6UWW0 184 aa9.67□□□□□ -0.86
CD44-201ENST00000263398 ZBTB44Q8NCP5 570 aa9.67□□□□□ -0.86
CD44-201ENST00000263398 OR4S1Q8NGB4 309 aa9.67□□□□□ -0.86
CD44-201ENST00000263398 RPH3ALQ9UNE2 315 aa9.67□□□□□ -0.86
CD44-201ENST00000263398 TRIP11Q15643 1979 aa9.67□□□□□ -0.86
CD44-201ENST00000263398 ZNF816-ZNF321PA0A0X1KG74 233 aa9.67□□□□□ -0.86
CD44-201ENST00000263398 BHLHE40O14503 412 aa9.67□□□□□ -0.86
CD44-201ENST00000263398 CDC42EP2O14613 210 aa9.67□□□□□ -0.86
CD44-201ENST00000263398 CLDN15P56746 228 aa9.67□□□□□ -0.86
CD44-201ENST00000263398 ZNF425Q6IV72 752 aa9.67□□□□□ -0.86
CD44-201ENST00000263398 ANKRD16Q6P6B7 361 aa9.67□□□□□ -0.86
CD44-201ENST00000263398 OSR2Q8N2R0 312 aa9.67□□□□□ -0.86
CD44-201ENST00000263398 ZNF485Q8NCK3 441 aa9.67□□□□□ -0.86
CD44-201ENST00000263398 C17orf47Q8NEP4 570 aa9.67□□□□□ -0.86
CD44-201ENST00000263398 SPSB1Q96BD6 273 aa9.67□□□□□ -0.86
CD44-201ENST00000263398 PCED1AQ9H1Q7 454 aa9.67□□□□□ -0.86
CD44-201ENST00000263398 ZNF727A8MUV8 499 aa9.67□□□□□ -0.86
CD44-201ENST00000263398 SSSCA1O60232 199 aa9.67□□□□□ -0.86
CD44-201ENST00000263398 PTHLHP12272 177 aa9.67□□□□□ -0.86
CD44-201ENST00000263398 B4GALT1P15291 398 aa9.67□□□□□ -0.86
CD44-201ENST00000263398 DRD3P35462 400 aa9.67□□□□□ -0.86
CD44-201ENST00000263398 RPS23P62266 143 aaKnown RBP9.67□□□□□ -0.86
CD44-201ENST00000263398 DHODHQ02127 395 aa9.67□□□□□ -0.86
CD44-201ENST00000263398 ZNF117Q03924 483 aa9.67□□□□□ -0.86
CD44-201ENST00000263398 PLA1AQ53H76 456 aa9.67□□□□□ -0.86
CD44-201ENST00000263398 PRSS41Q7RTY9 318 aa9.67□□□□□ -0.86
CD44-201ENST00000263398 ZDHHC23Q8IYP9 409 aa9.67□□□□□ -0.86
CD44-201ENST00000263398 DUSP18Q8NEJ0 188 aa9.67□□□□□ -0.86
CD44-201ENST00000263398 OR10P1Q8NGE3 313 aa9.67□□□□□ -0.86
CD44-201ENST00000263398 UQCC2Q9BRT2 126 aa9.67□□□□□ -0.86
CD44-201ENST00000263398 SUCNR1Q9BXA5 334 aa9.67□□□□□ -0.86
CD44-201ENST00000263398 LIN7CQ9NUP9 197 aaKnown RBP9.67□□□□□ -0.86
CD44-201ENST00000263398 UFSP2Q9NUQ7 469 aa9.67□□□□□ -0.86
CD44-201ENST00000263398 OR5V1Q9UGF6 321 aa9.67□□□□□ -0.86
CD44-201ENST00000263398 A0A096LPE4 126 aa9.66□□□□□ -0.86
CD44-201ENST00000263398 A0A1W2PPZ6 126 aa9.66□□□□□ -0.86
CD44-201ENST00000263398 AQP8O94778 261 aa9.66□□□□□ -0.86
CD44-201ENST00000263398 HOXC4P09017 264 aaPredicted RBP9.66□□□□□ -0.86
CD44-201ENST00000263398 HABP2Q14520 560 aaPredicted RBP9.66□□□□□ -0.86
CD44-201ENST00000263398 ZIC1Q15915 447 aa9.66□□□□□ -0.86
CD44-201ENST00000263398 ST3GAL2Q16842 350 aa9.66□□□□□ -0.86
CD44-201ENST00000263398 ZADH2Q8N4Q0 377 aa9.66□□□□□ -0.86
CD44-201ENST00000263398 CISD2Q8N5K1 135 aaKnown RBP9.66□□□□□ -0.86
CD44-201ENST00000263398 H1FXQ92522 213 aaKnown RBP9.66□□□□□ -0.86
CD44-201ENST00000263398 ABHD1Q96SE0 405 aa9.66□□□□□ -0.86
CD44-201ENST00000263398 SHARPINQ9H0F6 387 aa9.66□□□□□ -0.86
CD44-201ENST00000263398 FN3KRPQ9HA64 309 aa9.66□□□□□ -0.86
CD44-201ENST00000263398 FBXO34Q9NWN3 711 aa9.66□□□□□ -0.86
CD44-201ENST00000263398 NEU3Q9UQ49 428 aa9.66□□□□□ -0.86
CD44-201ENST00000263398 ALG1L2C9J202 215 aa9.66□□□□□ -0.86
CD44-201ENST00000263398 GP1BAP07359 652 aa9.66□□□□□ -0.86
CD44-201ENST00000263398 HAAOP46952 286 aa9.66□□□□□ -0.86
CD44-201ENST00000263398 FUT6P51993 359 aa9.66□□□□□ -0.86
CD44-201ENST00000263398 TCTN1Q2MV58 587 aa9.66□□□□□ -0.86
CD44-201ENST00000263398 CDONQ4KMG0 1287 aa9.66□□□□□ -0.86
CD44-201ENST00000263398 TDHQ8IZJ6 230 aa9.66□□□□□ -0.86
CD44-201ENST00000263398 TMEM123Q8N131 208 aa9.66□□□□□ -0.86
CD44-201ENST00000263398 OR5AP2Q8NGF4 316 aa9.66□□□□□ -0.86
CD44-201ENST00000263398 CHST6Q9GZX3 395 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms