RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 IDH3GP51553 393 aaPredicted RBP19.81■□□□□ 0.76
SMARCB1-201ENST00000263121 OR8B8Q15620 311 aa19.81■□□□□ 0.76
SMARCB1-201ENST00000263121 RAB11BQ15907 218 aa19.81■□□□□ 0.76
SMARCB1-201ENST00000263121 TBC1D28Q2M2D7 210 aa19.81■□□□□ 0.76
SMARCB1-201ENST00000263121 FAM131AQ6UXB0 335 aa19.81■□□□□ 0.76
SMARCB1-201ENST00000263121 NCCRP1Q6ZVX7 275 aaPredicted RBP19.81■□□□□ 0.76
SMARCB1-201ENST00000263121 OR52N4Q8NGI2 321 aa19.81■□□□□ 0.76
SMARCB1-201ENST00000263121 OR6M1Q8NGM8 313 aa19.81■□□□□ 0.76
SMARCB1-201ENST00000263121 SLC25A28Q96A46 364 aa19.81■□□□□ 0.76
SMARCB1-201ENST00000263121 DMRTA2Q96SC8 542 aa19.81■□□□□ 0.76
SMARCB1-201ENST00000263121 VKORC1Q9BQB6 163 aa19.81■□□□□ 0.76
SMARCB1-201ENST00000263121 ETV7Q9Y603 341 aa19.81■□□□□ 0.76
SMARCB1-201ENST00000263121 IGKV1-9A0A0C4DH69 117 aa19.8■□□□□ 0.76
SMARCB1-201ENST00000263121 ALX3O95076 343 aa19.8■□□□□ 0.76
SMARCB1-201ENST00000263121 PSMB1P20618 241 aaKnown RBP19.8■□□□□ 0.76
SMARCB1-201ENST00000263121 BMP5P22003 454 aa19.8■□□□□ 0.76
SMARCB1-201ENST00000263121 MAP2K3P46734 347 aa19.8■□□□□ 0.76
SMARCB1-201ENST00000263121 GSK3AP49840 483 aa19.8■□□□□ 0.76
SMARCB1-201ENST00000263121 RIPPLY1Q0D2K3 151 aa19.8■□□□□ 0.76
SMARCB1-201ENST00000263121 UBE2NLQ5JXB2 153 aa19.8■□□□□ 0.76
SMARCB1-201ENST00000263121 MRGPRGQ86SM5 289 aa19.8■□□□□ 0.76
SMARCB1-201ENST00000263121 SRRQ9GZT4 340 aa19.8■□□□□ 0.76
SMARCB1-201ENST00000263121 METTL17Q9H7H0 456 aaPredicted RBP19.8■□□□□ 0.76
SMARCB1-201ENST00000263121 AMDHD2Q9Y303 409 aa19.8■□□□□ 0.76
SMARCB1-201ENST00000263121 ICMTO60725 284 aa19.79■□□□□ 0.76
SMARCB1-201ENST00000263121 NGFP01138 241 aa19.79■□□□□ 0.76
SMARCB1-201ENST00000263121 ALDOBP05062 364 aa19.79■□□□□ 0.76
SMARCB1-201ENST00000263121 PTBP1P26599 531 aaKnown RBP eCLIP19.79■□□□□ 0.762e-9■■■■■ 39.5
SMARCB1-201ENST00000263121 HTR2CP28335 458 aa19.79■□□□□ 0.76
SMARCB1-201ENST00000263121 IFITM3Q01628 133 aa19.79■□□□□ 0.76
SMARCB1-201ENST00000263121 P2RY14Q15391 338 aa19.79■□□□□ 0.76
SMARCB1-201ENST00000263121 CDH26Q8IXH8 852 aa19.79■□□□□ 0.76
SMARCB1-201ENST00000263121 ZNF101Q8IZC7 436 aa19.79■□□□□ 0.76
SMARCB1-201ENST00000263121 JAGN1Q8N5M9 183 aa19.79■□□□□ 0.76
SMARCB1-201ENST00000263121 OR4M1Q8NGD0 313 aa19.79■□□□□ 0.76
SMARCB1-201ENST00000263121 SSC4DQ8WTU2 575 aa19.79■□□□□ 0.76
SMARCB1-201ENST00000263121 SLC25A38Q96DW6 304 aa19.79■□□□□ 0.76
SMARCB1-201ENST00000263121 NKX3-1Q99801 234 aaPredicted RBP19.79■□□□□ 0.76
SMARCB1-201ENST00000263121 REPIN1Q9BWE0 567 aaKnown RBP19.79■□□□□ 0.76
SMARCB1-201ENST00000263121 PPP1R3EQ9H7J1 279 aa19.79■□□□□ 0.76
SMARCB1-201ENST00000263121 TBCCD1Q9NVR7 557 aa19.79■□□□□ 0.76
SMARCB1-201ENST00000263121 EXTL2Q9UBQ6 330 aa19.79■□□□□ 0.76
SMARCB1-201ENST00000263121 STARD10Q9Y365 291 aa19.79■□□□□ 0.76
SMARCB1-201ENST00000263121 AGFG2O95081 481 aa19.78■□□□□ 0.76
SMARCB1-201ENST00000263121 IL32P24001 234 aa19.78■□□□□ 0.76
SMARCB1-201ENST00000263121 XKRXQ6PP77 449 aa19.78■□□□□ 0.76
SMARCB1-201ENST00000263121 SNX29P2Q8IUI4 249 aa19.78■□□□□ 0.76
SMARCB1-201ENST00000263121 UQCC2Q9BRT2 126 aa19.78■□□□□ 0.76
SMARCB1-201ENST00000263121 SLC25A15Q9Y619 301 aa19.78■□□□□ 0.76
SMARCB1-201ENST00000263121 EEF1E1-BLOC1S5C9J1V9 151 aa19.78■□□□□ 0.76
SMARCB1-201ENST00000263121 J3QW42 95 aa19.78■□□□□ 0.76
SMARCB1-201ENST00000263121 EEF1E1O43324 174 aaKnown RBP19.78■□□□□ 0.76
SMARCB1-201ENST00000263121 UPK1BO75841 260 aa19.78■□□□□ 0.76
SMARCB1-201ENST00000263121 IGLV1-44P01699 117 aa19.78■□□□□ 0.76
SMARCB1-201ENST00000263121 CA7P43166 264 aa19.78■□□□□ 0.76
SMARCB1-201ENST00000263121 PRSS12P56730 875 aa19.78■□□□□ 0.76
SMARCB1-201ENST00000263121 MALLQ13021 153 aa19.78■□□□□ 0.76
SMARCB1-201ENST00000263121 RIN1Q13671 783 aa19.78■□□□□ 0.76
SMARCB1-201ENST00000263121 GK2Q14410 553 aaPredicted RBP19.78■□□□□ 0.76
SMARCB1-201ENST00000263121 UBE2V2Q15819 145 aa19.78■□□□□ 0.76
SMARCB1-201ENST00000263121 TMEM42Q69YG0 159 aa19.78■□□□□ 0.76
SMARCB1-201ENST00000263121 TMEM211Q6ICI0 200 aa19.78■□□□□ 0.76
SMARCB1-201ENST00000263121 FAM169BQ8N8A8 192 aa19.78■□□□□ 0.76
SMARCB1-201ENST00000263121 OR51D1Q8NGF3 324 aa19.78■□□□□ 0.76
SMARCB1-201ENST00000263121 FAM3DQ96BQ1 224 aa19.78■□□□□ 0.76
SMARCB1-201ENST00000263121 SORCS2Q96PQ0 1159 aa19.78■□□□□ 0.76
SMARCB1-201ENST00000263121 CCDC32Q9BV29 185 aa19.78■□□□□ 0.76
SMARCB1-201ENST00000263121 JKAMPQ9P055 326 aa19.78■□□□□ 0.76
SMARCB1-201ENST00000263121 MEMO1Q9Y316 297 aa19.78■□□□□ 0.76
SMARCB1-201ENST00000263121 SHANK1Q9Y566 2161 aa19.77■□□□□ 0.76
SMARCB1-201ENST00000263121 PRF1P14222 555 aa19.77■□□□□ 0.76
SMARCB1-201ENST00000263121 TALDO1P37837 337 aa19.77■□□□□ 0.76
SMARCB1-201ENST00000263121 MRPL49Q13405 166 aaKnown RBP19.77■□□□□ 0.76
SMARCB1-201ENST00000263121 TIMM23BQ5SRD1 257 aa19.77■□□□□ 0.76
SMARCB1-201ENST00000263121 ZBTB37Q5TC79 503 aa19.77■□□□□ 0.76
SMARCB1-201ENST00000263121 RFPL4BQ6ZWI9 263 aa19.77■□□□□ 0.76
SMARCB1-201ENST00000263121 LIX1LQ8IVB5 337 aa19.77■□□□□ 0.76
SMARCB1-201ENST00000263121 RELL2Q8NC24 303 aaPredicted RBP19.77■□□□□ 0.76
SMARCB1-201ENST00000263121 OR4D6Q8NGJ1 314 aa19.77■□□□□ 0.76
SMARCB1-201ENST00000263121 ITFG2Q969R8 447 aa19.77■□□□□ 0.76
SMARCB1-201ENST00000263121 ABCG5Q9H222 651 aa19.77■□□□□ 0.76
SMARCB1-201ENST00000263121 POFUT1Q9H488 388 aa19.77■□□□□ 0.76
SMARCB1-201ENST00000263121 OPA3Q9H6K4 179 aa19.77■□□□□ 0.76
SMARCB1-201ENST00000263121 CNTD2Q9H8S5 307 aa19.77■□□□□ 0.76
SMARCB1-201ENST00000263121 CDH20Q9HBT6 801 aa19.77■□□□□ 0.76
SMARCB1-201ENST00000263121 MAP1BP46821 2468 aaKnown RBP19.76■□□□□ 0.75
SMARCB1-201ENST00000263121 TRGV8A0A0C4DH27 118 aa19.76■□□□□ 0.75
SMARCB1-201ENST00000263121 LOC100289279A0A1B0GTE1 492 aa19.76■□□□□ 0.75
SMARCB1-201ENST00000263121 POU3F4P49335 361 aa19.76■□□□□ 0.75
SMARCB1-201ENST00000263121 CASP6P55212 293 aa19.76■□□□□ 0.75
SMARCB1-201ENST00000263121 CMTM4Q8IZR5 234 aa19.76■□□□□ 0.75
SMARCB1-201ENST00000263121 RND1Q92730 232 aa19.76■□□□□ 0.75
SMARCB1-201ENST00000263121 S100PBPQ96BU1 408 aa19.76■□□□□ 0.75
SMARCB1-201ENST00000263121 PTTG3PQ9NZH4 202 aa19.76■□□□□ 0.75
SMARCB1-201ENST00000263121 AZGP1P25311 298 aaKnown RBP19.75■□□□□ 0.75
SMARCB1-201ENST00000263121 ZNF93P35789 620 aaPredicted RBP19.75■□□□□ 0.75
SMARCB1-201ENST00000263121 MADCAM1Q13477 382 aa19.75■□□□□ 0.75
SMARCB1-201ENST00000263121 IL18Q14116 193 aa19.75■□□□□ 0.75
SMARCB1-201ENST00000263121 ZNF181Q2M3W8 571 aa19.75■□□□□ 0.75
SMARCB1-201ENST00000263121 C2orf76Q3KRA6 126 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms