RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 NPIPA2E9PIF3 369 aa7.54□□□□□ -1.2
LDB3-201ENST00000263066 NPIPA5E9PKD4 350 aa7.54□□□□□ -1.2
LDB3-201ENST00000263066 NPIPA3F8WFD2 350 aa7.54□□□□□ -1.2
LDB3-201ENST00000263066 PRAMEF26H0Y7S4 382 aa7.54□□□□□ -1.2
LDB3-201ENST00000263066 GCGP01275 180 aa7.54□□□□□ -1.2
LDB3-201ENST00000263066 GSTP1P09211 210 aaKnown RBP7.54□□□□□ -1.2
LDB3-201ENST00000263066 OR4A8P0C604 315 aa7.54□□□□□ -1.2
LDB3-201ENST00000263066 HSD3B2P26439 372 aa7.54□□□□□ -1.2
LDB3-201ENST00000263066 DLK1P80370 383 aa7.54□□□□□ -1.2
LDB3-201ENST00000263066 LSM11P83369 360 aaKnown RBP eCLIP7.54□□□□□ -1.2
LDB3-201ENST00000263066 EFNB1P98172 346 aa7.54□□□□□ -1.2
LDB3-201ENST00000263066 ZNF345Q14585 488 aa7.54□□□□□ -1.2
LDB3-201ENST00000263066 KLHL24Q6TFL4 600 aa7.54□□□□□ -1.2
LDB3-201ENST00000263066 OR13C3Q8NGS6 347 aa7.54□□□□□ -1.2
LDB3-201ENST00000263066 OR6N1Q8NGY5 312 aa7.54□□□□□ -1.2
LDB3-201ENST00000263066 BCL2L2Q92843 193 aaPredicted RBP7.54□□□□□ -1.2
LDB3-201ENST00000263066 MALSU1Q96EH3 234 aa7.54□□□□□ -1.2
LDB3-201ENST00000263066 OR7D2Q96RA2 312 aa7.54□□□□□ -1.2
LDB3-201ENST00000263066 CMKLR1Q99788 373 aa7.54□□□□□ -1.2
LDB3-201ENST00000263066 BARX1Q9HBU1 254 aaPredicted RBP7.54□□□□□ -1.2
LDB3-201ENST00000263066 NPIPA1Q9UND3 350 aa7.54□□□□□ -1.2
LDB3-201ENST00000263066 SPACA6W5XKT8 324 aa7.54□□□□□ -1.2
LDB3-201ENST00000263066 RALGAPA2Q2PPJ7 1873 aa7.54□□□□□ -1.2
LDB3-201ENST00000263066 CHD3Q12873 2000 aaKnown RBP7.54□□□□□ -1.2
LDB3-201ENST00000263066 THSD7BQ9C0I4 1608 aa7.54□□□□□ -1.2
LDB3-201ENST00000263066 A0A0U1RQK1 487 aa7.54□□□□□ -1.2
LDB3-201ENST00000263066 RNF212BA8MTL3 300 aa7.54□□□□□ -1.2
LDB3-201ENST00000263066 HPRT1P00492 218 aa7.54□□□□□ -1.2
LDB3-201ENST00000263066 CISD3P0C7P0 127 aa7.54□□□□□ -1.2
LDB3-201ENST00000263066 HTR1FP30939 366 aa7.54□□□□□ -1.2
LDB3-201ENST00000263066 CD96P40200 585 aa7.54□□□□□ -1.2
LDB3-201ENST00000263066 HINT1P49773 126 aaPredicted RBP7.54□□□□□ -1.2
LDB3-201ENST00000263066 RAB28P51157 221 aa7.54□□□□□ -1.2
LDB3-201ENST00000263066 PRRX1P54821 245 aa7.54□□□□□ -1.2
LDB3-201ENST00000263066 KLF3P57682 345 aaPredicted RBP7.54□□□□□ -1.2
LDB3-201ENST00000263066 RPS23P62266 143 aaKnown RBP7.54□□□□□ -1.2
LDB3-201ENST00000263066 MRPS11P82912 194 aaKnown RBP7.54□□□□□ -1.2
LDB3-201ENST00000263066 ADIRFQ15847 76 aa7.54□□□□□ -1.2
LDB3-201ENST00000263066 PGGHGQ32M88 737 aa7.54□□□□□ -1.2
LDB3-201ENST00000263066 SLC22A6Q4U2R8 563 aa7.54□□□□□ -1.2
LDB3-201ENST00000263066 ZNF880Q6PDB4 577 aa7.54□□□□□ -1.2
LDB3-201ENST00000263066 TMEM182Q6ZP80 229 aaPredicted RBP7.54□□□□□ -1.2
LDB3-201ENST00000263066 FAM83HQ6ZRV2 1179 aaPredicted RBP7.54□□□□□ -1.2
LDB3-201ENST00000263066 TMEM123Q8N131 208 aa7.54□□□□□ -1.2
LDB3-201ENST00000263066 ST6GALNAC3Q8NDV1 305 aa7.54□□□□□ -1.2
LDB3-201ENST00000263066 GPR150Q8NGU9 434 aa7.54□□□□□ -1.2
LDB3-201ENST00000263066 SNIP1Q8TAD8 396 aaKnown RBP7.54□□□□□ -1.2
LDB3-201ENST00000263066 OR8B4Q96RC9 309 aa7.54□□□□□ -1.2
LDB3-201ENST00000263066 HCAR1Q9BXC0 346 aa7.54□□□□□ -1.2
LDB3-201ENST00000263066 ADAP2Q9NPF8 381 aa7.54□□□□□ -1.2
LDB3-201ENST00000263066 P2RX2Q9UBL9 471 aa7.54□□□□□ -1.2
LDB3-201ENST00000263066 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.54□□□□□ -1.2
LDB3-201ENST00000263066 PTPRQQ9UMZ3 2332 aa7.54□□□□□ -1.2
LDB3-201ENST00000263066 NOTCH4Q99466 2003 aa7.54□□□□□ -1.2
LDB3-201ENST00000263066 TRAV14DV4A0A0A6YYC5 116 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 A0A1W2PNV4 684 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 MKRN2OSH3BPM6 223 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 H3BQ15 152 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 SLC16A5O15375 505 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 TTRP02766 147 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 GZMBP10144 247 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 DPP4P27487 766 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 RBMXP38159 391 aaKnown RBP7.53□□□□□ -1.2
LDB3-201ENST00000263066 RPL34P49207 117 aaKnown RBP7.53□□□□□ -1.2
LDB3-201ENST00000263066 BIDP55957 195 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 RPL23AP62750 156 aaKnown RBP7.53□□□□□ -1.2
LDB3-201ENST00000263066 ZP2Q05996 745 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 TMEM183BQ1AE95 376 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 GKN2Q86XP6 184 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 C1orf210Q8IVY1 113 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 GCNT2Q8N0V5 402 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 ASB13Q8WXK3 278 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 CLUHP3Q96NS8 147 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 CLEC5AQ9NY25 188 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 CKLFQ9UBR5 152 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 OR5V1Q9UGF6 321 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 TESQ9UGI8 421 aaKnown RBP7.53□□□□□ -1.2
LDB3-201ENST00000263066 FITM1A5D6W6 292 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 ZNF264O43296 627 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 GSTZ1O43708 216 aaPredicted RBP7.53□□□□□ -1.2
LDB3-201ENST00000263066 GLSO94925 669 aaPredicted RBP7.53□□□□□ -1.2
LDB3-201ENST00000263066 CD74P04233 296 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 PI3P19957 117 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 NT5EP21589 574 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 CMPK1P30085 196 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 HOXC12P31275 282 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 TNFRSF4P43489 277 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 SCGB2A2Q13296 93 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 KIAA0895LQ68EN5 471 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 DPPA3Q6W0C5 159 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 MEPCEQ7L2J0 689 aaKnown RBP7.53□□□□□ -1.2
LDB3-201ENST00000263066 CATSPERDQ86XM0 798 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 SPEM1Q8N4L4 309 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 EID2BQ96D98 161 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 MMABQ96EY8 250 aaPredicted RBP7.53□□□□□ -1.2
LDB3-201ENST00000263066 ALG14Q96F25 216 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 LCORQ96JN0 433 aaPredicted RBP7.53□□□□□ -1.2
LDB3-201ENST00000263066 SLC35G5Q96KT7 338 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 KCNE5Q9UJ90 142 aa7.53□□□□□ -1.2
LDB3-201ENST00000263066 SLC7A7Q9UM01 511 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms