RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 CTXN2P0C2S0 81 aa11.66□□□□□ -0.54
TTC39A-202ENST00000262676 TGFBR1P36897 503 aa11.66□□□□□ -0.54
TTC39A-202ENST00000262676 CAMKMTQ7Z624 323 aa11.66□□□□□ -0.54
TTC39A-202ENST00000262676 ZNF583Q96ND8 569 aa11.66□□□□□ -0.54
TTC39A-202ENST00000262676 GLIPR2Q9H4G4 154 aa11.66□□□□□ -0.54
TTC39A-202ENST00000262676 MTCH2Q9Y6C9 303 aa11.66□□□□□ -0.54
TTC39A-202ENST00000262676 TRPM3Q9HCF6 1732 aaPredicted RBP11.66□□□□□ -0.54
TTC39A-202ENST00000262676 A0A1W2PPC4 97 aa11.65□□□□□ -0.54
TTC39A-202ENST00000262676 TEAD1P28347 426 aa11.65□□□□□ -0.54
TTC39A-202ENST00000262676 PIGPP57054 158 aa11.65□□□□□ -0.54
TTC39A-202ENST00000262676 B2MP61769 119 aa11.65□□□□□ -0.54
TTC39A-202ENST00000262676 CSNK1G2P78368 415 aa11.65□□□□□ -0.54
TTC39A-202ENST00000262676 PRDX1Q06830 199 aaKnown RBP11.65□□□□□ -0.54
TTC39A-202ENST00000262676 TMEM267Q0VDI3 215 aaPredicted RBP11.65□□□□□ -0.54
TTC39A-202ENST00000262676 C1orf140Q5VVS0 124 aa11.65□□□□□ -0.54
TTC39A-202ENST00000262676 ANKRD16Q6P6B7 361 aa11.65□□□□□ -0.54
TTC39A-202ENST00000262676 C11orf40Q8WZ69 217 aa11.65□□□□□ -0.54
TTC39A-202ENST00000262676 BET1LQ9NYM9 111 aa11.65□□□□□ -0.54
TTC39A-202ENST00000262676 FBXO4Q9UKT5 387 aa11.65□□□□□ -0.54
TTC39A-202ENST00000262676 MYH14Q7Z406 1995 aaKnown RBP11.65□□□□□ -0.54
TTC39A-202ENST00000262676 ALOX12BO75342 701 aa11.65□□□□□ -0.54
TTC39A-202ENST00000262676 GABRG2P18507 467 aa11.65□□□□□ -0.54
TTC39A-202ENST00000262676 CLDN10P78369 228 aa11.65□□□□□ -0.54
TTC39A-202ENST00000262676 NKAIN1Q4KMZ8 207 aa11.65□□□□□ -0.54
TTC39A-202ENST00000262676 TMEM81Q6P7N7 255 aa11.65□□□□□ -0.54
TTC39A-202ENST00000262676 SPRED2Q7Z698 418 aa11.65□□□□□ -0.54
TTC39A-202ENST00000262676 PAPPA2Q9BXP8 1791 aa11.65□□□□□ -0.54
TTC39A-202ENST00000262676 H3BP45 60 aa11.65□□□□□ -0.54
TTC39A-202ENST00000262676 ASAH1Q13510 395 aa11.65□□□□□ -0.54
TTC39A-202ENST00000262676 SYT6Q5T7P8 510 aaPredicted RBP11.65□□□□□ -0.54
TTC39A-202ENST00000262676 SPNS3Q6ZMD2 512 aa11.65□□□□□ -0.54
TTC39A-202ENST00000262676 LHFPL2Q6ZUX7 228 aa11.65□□□□□ -0.54
TTC39A-202ENST00000262676 LKAAEAR1Q8TD35 194 aa11.65□□□□□ -0.54
TTC39A-202ENST00000262676 NUDCD2Q8WVJ2 157 aa11.65□□□□□ -0.54
TTC39A-202ENST00000262676 TM4SF18Q96CE8 201 aa11.65□□□□□ -0.54
TTC39A-202ENST00000262676 C1QTNF3Q9BXJ4 246 aa11.65□□□□□ -0.54
TTC39A-202ENST00000262676 DLL4Q9NR61 685 aa11.65□□□□□ -0.54
TTC39A-202ENST00000262676 U3KQ87 197 aa11.65□□□□□ -0.54
TTC39A-202ENST00000262676 RBP4P02753 201 aa11.65□□□□□ -0.54
TTC39A-202ENST00000262676 SELEP16581 610 aa11.65□□□□□ -0.54
TTC39A-202ENST00000262676 FAM3AP98173 230 aa11.65□□□□□ -0.54
TTC39A-202ENST00000262676 LYRM7Q5U5X0 104 aa11.65□□□□□ -0.54
TTC39A-202ENST00000262676 Q6ZN92 141 aa11.65□□□□□ -0.54
TTC39A-202ENST00000262676 YRDCQ86U90 279 aaKnown RBP11.65□□□□□ -0.54
TTC39A-202ENST00000262676 MYPOPQ86VE0 399 aaPredicted RBP11.65□□□□□ -0.54
TTC39A-202ENST00000262676 TCTEX1D1Q8N7M0 179 aa11.65□□□□□ -0.54
TTC39A-202ENST00000262676 PRSS3P2Q8NHM4 247 aa11.65□□□□□ -0.54
TTC39A-202ENST00000262676 TAAR6Q96RI8 345 aa11.65□□□□□ -0.54
TTC39A-202ENST00000262676 P2RY12Q9H244 342 aa11.65□□□□□ -0.54
TTC39A-202ENST00000262676 UBQLN3Q9H347 655 aa11.65□□□□□ -0.54
TTC39A-202ENST00000262676 ADGRL4Q9HBW9 690 aa11.65□□□□□ -0.54
TTC39A-202ENST00000262676 CLEC18AA5D8T8 446 aa11.65□□□□□ -0.54
TTC39A-202ENST00000262676 RNASEK-C17orf49H0YIS7 233 aa11.65□□□□□ -0.54
TTC39A-202ENST00000262676 M0R1B8 84 aa11.65□□□□□ -0.54
TTC39A-202ENST00000262676 SIGLEC14Q08ET2 396 aa11.65□□□□□ -0.54
TTC39A-202ENST00000262676 IGSF11Q5DX21 431 aa11.65□□□□□ -0.54
TTC39A-202ENST00000262676 CLEC18CQ8NCF0 446 aa11.65□□□□□ -0.54
TTC39A-202ENST00000262676 ZNF485Q8NCK3 441 aa11.65□□□□□ -0.54
TTC39A-202ENST00000262676 C2orf50Q96LR7 162 aa11.65□□□□□ -0.54
TTC39A-202ENST00000262676 PLEKHA2Q9HB19 425 aa11.65□□□□□ -0.54
TTC39A-202ENST00000262676 NDUFB11Q9NX14 153 aa11.65□□□□□ -0.54
TTC39A-202ENST00000262676 PCDHGA9Q9Y5G4 932 aaKnown RBP11.65□□□□□ -0.54
TTC39A-202ENST00000262676 TCHHQ07283 1943 aa11.65□□□□□ -0.55
TTC39A-202ENST00000262676 A0A1B0GX78 115 aa11.64□□□□□ -0.55
TTC39A-202ENST00000262676 RPL27P61353 136 aaKnown RBP11.64□□□□□ -0.55
TTC39A-202ENST00000262676 OR2A2Q6IF42 318 aa11.64□□□□□ -0.55
TTC39A-202ENST00000262676 WDR88Q6ZMY6 472 aa11.64□□□□□ -0.55
TTC39A-202ENST00000262676 PROCRQ9UNN8 238 aa11.64□□□□□ -0.55
TTC39A-202ENST00000262676 SCN9AQ15858 1988 aa11.64□□□□□ -0.55
TTC39A-202ENST00000262676 ADAM11O75078 769 aa11.64□□□□□ -0.55
TTC39A-202ENST00000262676 MT-CO3P00414 261 aa11.64□□□□□ -0.55
TTC39A-202ENST00000262676 AREGP15514 252 aa11.64□□□□□ -0.55
TTC39A-202ENST00000262676 MMP11P24347 488 aa11.64□□□□□ -0.55
TTC39A-202ENST00000262676 SLC6A12P48065 614 aa11.64□□□□□ -0.55
TTC39A-202ENST00000262676 H1FNTQ75WM6 255 aaPredicted RBP11.64□□□□□ -0.55
TTC39A-202ENST00000262676 BAP18Q8IXM2 172 aa11.64□□□□□ -0.55
TTC39A-202ENST00000262676 CMTM4Q8IZR5 234 aa11.64□□□□□ -0.55
TTC39A-202ENST00000262676 MS4A10Q96PG2 267 aa11.64□□□□□ -0.55
TTC39A-202ENST00000262676 RSRP1Q9BUV0 290 aa11.64□□□□□ -0.55
TTC39A-202ENST00000262676 C5orf49A4QMS7 147 aa11.64□□□□□ -0.55
TTC39A-202ENST00000262676 GOSR1O95249 250 aa11.64□□□□□ -0.55
TTC39A-202ENST00000262676 MGMTP16455 207 aa11.64□□□□□ -0.55
TTC39A-202ENST00000262676 PTBP1P26599 531 aaKnown RBP eCLIP11.64□□□□□ -0.55
TTC39A-202ENST00000262676 HES3Q5TGS1 186 aa11.64□□□□□ -0.55
TTC39A-202ENST00000262676 PAQR6Q6TCH4 344 aa11.64□□□□□ -0.55
TTC39A-202ENST00000262676 OR1L4Q8NGR5 311 aa11.64□□□□□ -0.55
TTC39A-202ENST00000262676 BCL2L2Q92843 193 aaPredicted RBP11.64□□□□□ -0.55
TTC39A-202ENST00000262676 WDR61Q9GZS3 305 aaKnown RBP11.64□□□□□ -0.55
TTC39A-202ENST00000262676 SLC5A6Q9Y289 635 aa11.64□□□□□ -0.55
TTC39A-202ENST00000262676 DUS4LO95620 317 aaKnown RBP11.64□□□□□ -0.55
TTC39A-202ENST00000262676 NAT1P18440 290 aa11.64□□□□□ -0.55
TTC39A-202ENST00000262676 PGFP49763 221 aa11.64□□□□□ -0.55
TTC39A-202ENST00000262676 SULT1A1P50225 295 aa11.64□□□□□ -0.55
TTC39A-202ENST00000262676 GUSBP11Q6P575 273 aa11.64□□□□□ -0.55
TTC39A-202ENST00000262676 OR5M9Q8NGP3 310 aa11.64□□□□□ -0.55
TTC39A-202ENST00000262676 C19orf43Q9BQ61 176 aa11.64□□□□□ -0.55
TTC39A-202ENST00000262676 PPT2Q9UMR5 302 aa11.64□□□□□ -0.55
TTC39A-202ENST00000262676 STRCQ7RTU9 1775 aa11.64□□□□□ -0.55
TTC39A-202ENST00000262676 FAM90A27PA6NNH2 459 aa11.64□□□□□ -0.55
TTC39A-202ENST00000262676 ONECUT2O95948 504 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms