RNA–Protein interactions for RNA: ENST00000261302.9

FOXN3-201, Transcript of forkhead box N3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene FOXN3, Length 2,542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-201ENST00000261302 ZNF679Q8IYX0 411 aa11.28□□□□□ -0.6
FOXN3-201ENST00000261302 DCAF4L2Q8NA75 395 aa11.28□□□□□ -0.6
FOXN3-201ENST00000261302 SLC24A4Q8NFF2 622 aa11.28□□□□□ -0.6
FOXN3-201ENST00000261302 OR9A1PQ8NGU1 263 aa11.28□□□□□ -0.6
FOXN3-201ENST00000261302 AQP3Q92482 292 aa11.28□□□□□ -0.6
FOXN3-201ENST00000261302 ALG14Q96F25 216 aa11.28□□□□□ -0.6
FOXN3-201ENST00000261302 LMF1Q96S06 567 aa11.28□□□□□ -0.6
FOXN3-201ENST00000261302 RARRES2Q99969 163 aa11.28□□□□□ -0.6
FOXN3-201ENST00000261302 GINS3Q9BRX5 216 aa11.28□□□□□ -0.6
FOXN3-201ENST00000261302 PHF7Q9BWX1 381 aaPredicted RBP11.28□□□□□ -0.6
FOXN3-201ENST00000261302 DNAJC4Q9NNZ3 241 aa11.28□□□□□ -0.6
FOXN3-201ENST00000261302 TMEM242Q9NWH2 141 aa11.28□□□□□ -0.6
FOXN3-201ENST00000261302 GTF2A1LQ9UNN4 478 aa11.28□□□□□ -0.6
FOXN3-201ENST00000261302 C2orf16Q68DN1 1984 aa11.28□□□□□ -0.6
FOXN3-201ENST00000261302 TICRRQ7Z2Z1 1910 aa11.28□□□□□ -0.6
FOXN3-201ENST00000261302 TRBV24-1A0A075B6N3 115 aa11.28□□□□□ -0.6
FOXN3-201ENST00000261302 TMEM212A6NML5 194 aa11.28□□□□□ -0.6
FOXN3-201ENST00000261302 B4DEV8 164 aa11.28□□□□□ -0.6
FOXN3-201ENST00000261302 CORO1AP31146 461 aaKnown RBP11.28□□□□□ -0.6
FOXN3-201ENST00000261302 SLC25A1P53007 311 aa11.28□□□□□ -0.6
FOXN3-201ENST00000261302 S100A10P60903 97 aa11.28□□□□□ -0.6
FOXN3-201ENST00000261302 ENPP2Q13822 863 aa11.28□□□□□ -0.6
FOXN3-201ENST00000261302 SLC35E3Q7Z769 313 aa11.28□□□□□ -0.6
FOXN3-201ENST00000261302 NOXO1Q8NFA2 376 aa11.28□□□□□ -0.6
FOXN3-201ENST00000261302 OR51A4Q8NGJ6 313 aa11.28□□□□□ -0.6
FOXN3-201ENST00000261302 SMARCD2Q92925 531 aa11.28□□□□□ -0.6
FOXN3-201ENST00000261302 TMEM230Q96A57 120 aa11.28□□□□□ -0.6
FOXN3-201ENST00000261302 NMNAT2Q9BZQ4 307 aa11.28□□□□□ -0.6
FOXN3-201ENST00000261302 COMMD4Q9H0A8 199 aa11.28□□□□□ -0.6
FOXN3-201ENST00000261302 ZMAT3Q9HA38 289 aaKnown RBP11.28□□□□□ -0.6
FOXN3-201ENST00000261302 ADAP2Q9NPF8 381 aa11.28□□□□□ -0.6
FOXN3-201ENST00000261302 MEMO1Q9Y316 297 aa11.28□□□□□ -0.6
FOXN3-201ENST00000261302 B4E171 279 aa11.27□□□□□ -0.61
FOXN3-201ENST00000261302 H0YL77 283 aa11.27□□□□□ -0.61
FOXN3-201ENST00000261302 SCAF4O95104 1147 aaKnown RBP11.27□□□□□ -0.61
FOXN3-201ENST00000261302 FBXO45P0C2W1 286 aa11.27□□□□□ -0.61
FOXN3-201ENST00000261302 FGF5P12034 268 aa11.27□□□□□ -0.61
FOXN3-201ENST00000261302 GABRA4P48169 554 aa11.27□□□□□ -0.61
FOXN3-201ENST00000261302 PDLIM4P50479 330 aa11.27□□□□□ -0.61
FOXN3-201ENST00000261302 CLEC18BQ6UXF7 455 aa11.27□□□□□ -0.61
FOXN3-201ENST00000261302 ZNF429Q86V71 674 aa11.27□□□□□ -0.61
FOXN3-201ENST00000261302 OR4X1Q8NH49 305 aa11.27□□□□□ -0.61
FOXN3-201ENST00000261302 MARCH1Q8TCQ1 289 aa11.27□□□□□ -0.61
FOXN3-201ENST00000261302 PLD4Q96BZ4 506 aa11.27□□□□□ -0.61
FOXN3-201ENST00000261302 YIPF1Q9Y548 306 aa11.27□□□□□ -0.61
FOXN3-201ENST00000261302 UNC80Q8N2C7 3258 aa11.27□□□□□ -0.61
FOXN3-201ENST00000261302 RBFOX3A6NFN3 312 aa11.27□□□□□ -0.61
FOXN3-201ENST00000261302 C19orf67A6NJJ6 358 aa11.27□□□□□ -0.61
FOXN3-201ENST00000261302 CEACAM18A8MTB9 384 aa11.27□□□□□ -0.61
FOXN3-201ENST00000261302 K7EP13 123 aa11.27□□□□□ -0.61
FOXN3-201ENST00000261302 CCL16O15467 120 aa11.27□□□□□ -0.61
FOXN3-201ENST00000261302 HCRTR2O43614 444 aa11.27□□□□□ -0.61
FOXN3-201ENST00000261302 CKMP06732 381 aa11.27□□□□□ -0.61
FOXN3-201ENST00000261302 CHRM2P08172 466 aa11.27□□□□□ -0.61
FOXN3-201ENST00000261302 SRP19P09132 144 aaKnown RBP11.27□□□□□ -0.61
FOXN3-201ENST00000261302 SELEP16581 610 aa11.27□□□□□ -0.61
FOXN3-201ENST00000261302 GRPRP30550 384 aa11.27□□□□□ -0.61
FOXN3-201ENST00000261302 GDI1P31150 447 aa11.27□□□□□ -0.61
FOXN3-201ENST00000261302 PPP1CCP36873 323 aaKnown RBP11.27□□□□□ -0.61
FOXN3-201ENST00000261302 MMP16P51512 607 aa11.27□□□□□ -0.61
FOXN3-201ENST00000261302 IDH3GP51553 393 aaPredicted RBP11.27□□□□□ -0.61
FOXN3-201ENST00000261302 ZP2Q05996 745 aa11.27□□□□□ -0.61
FOXN3-201ENST00000261302 PRAMEF14Q5SWL7 426 aa11.27□□□□□ -0.61
FOXN3-201ENST00000261302 ZNF676Q8N7Q3 588 aa11.27□□□□□ -0.61
FOXN3-201ENST00000261302 EXD3Q8N9H8 876 aa11.27□□□□□ -0.61
FOXN3-201ENST00000261302 NPEPL1Q8NDH3 523 aa11.27□□□□□ -0.61
FOXN3-201ENST00000261302 RCBTB1Q8NDN9 531 aa11.27□□□□□ -0.61
FOXN3-201ENST00000261302 NUP43Q8NFH3 380 aa11.27□□□□□ -0.61
FOXN3-201ENST00000261302 OR2AP1Q8NGE2 309 aa11.27□□□□□ -0.61
FOXN3-201ENST00000261302 OR6K6Q8NGW6 343 aa11.27□□□□□ -0.61
FOXN3-201ENST00000261302 GLRX2Q9NS18 164 aa11.27□□□□□ -0.61
FOXN3-201ENST00000261302 RAB22AQ9UL26 194 aa11.27□□□□□ -0.61
FOXN3-201ENST00000261302 COLEC10Q9Y6Z7 277 aa11.27□□□□□ -0.61
FOXN3-201ENST00000261302 A0A0A6YYD5 115 aa11.26□□□□□ -0.61
FOXN3-201ENST00000261302 FITM1A5D6W6 292 aa11.26□□□□□ -0.61
FOXN3-201ENST00000261302 NUDT21O43809 227 aaKnown RBP11.26□□□□□ -0.61
FOXN3-201ENST00000261302 CIDEAO60543 219 aa11.26□□□□□ -0.61
FOXN3-201ENST00000261302 MMP7P09237 267 aaPredicted RBP11.26□□□□□ -0.61
FOXN3-201ENST00000261302 SLC35G6P0C7Q6 338 aa11.26□□□□□ -0.61
FOXN3-201ENST00000261302 CCKARP32238 428 aa11.26□□□□□ -0.61
FOXN3-201ENST00000261302 HRH1P35367 487 aa11.26□□□□□ -0.61
FOXN3-201ENST00000261302 PRLHRP49683 370 aa11.26□□□□□ -0.61
FOXN3-201ENST00000261302 SLC37A1P57057 533 aa11.26□□□□□ -0.61
FOXN3-201ENST00000261302 CLDN2P57739 230 aa11.26□□□□□ -0.61
FOXN3-201ENST00000261302 DUSP2Q05923 314 aa11.26□□□□□ -0.61
FOXN3-201ENST00000261302 DUSP8Q13202 625 aa11.26□□□□□ -0.61
FOXN3-201ENST00000261302 OR5I1Q13606 314 aa11.26□□□□□ -0.61
FOXN3-201ENST00000261302 LINC01590Q5TEZ4 76 aa11.26□□□□□ -0.61
FOXN3-201ENST00000261302 LEMD1Q68G75 181 aa11.26□□□□□ -0.61
FOXN3-201ENST00000261302 ADGRE4PQ86SQ3 457 aa11.26□□□□□ -0.61
FOXN3-201ENST00000261302 TRAPPC6BQ86SZ2 158 aa11.26□□□□□ -0.61
FOXN3-201ENST00000261302 MS4A6EQ96DS6 147 aa11.26□□□□□ -0.61
FOXN3-201ENST00000261302 SLC35A4Q96G79 324 aa11.26□□□□□ -0.61
FOXN3-201ENST00000261302 METTL8Q9H825 291 aaKnown RBP11.26□□□□□ -0.61
FOXN3-201ENST00000261302 RXFP3Q9NSD7 469 aa11.26□□□□□ -0.61
FOXN3-201ENST00000261302 POLR3KQ9Y2Y1 108 aaPredicted RBP11.26□□□□□ -0.61
FOXN3-201ENST00000261302 IER3IP1Q9Y5U9 82 aa11.26□□□□□ -0.61
FOXN3-201ENST00000261302 A0A1B0GTH9 108 aa11.26□□□□□ -0.61
FOXN3-201ENST00000261302 A0A1B0GVT2 93 aa11.26□□□□□ -0.61
FOXN3-201ENST00000261302 PPP5D1E7EU14 171 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms