RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 C11orf40Q8WZ69 217 aa4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 CRB3Q9BUF7 120 aa4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 LDAHQ9H6V9 325 aa4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 METTL7AQ9H8H3 244 aa4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 SUSD5O60279 629 aa4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 TMEM127O75204 238 aa4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 NDUFS7O75251 213 aa4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 SFTPCP11686 197 aa4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 C11orf91Q3C1V1 193 aa4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 RFPL4BQ6ZWI9 263 aa4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 DPY19L4Q7Z388 723 aa4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 OR14K1Q8NGZ2 314 aa4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 C22orf15Q8WYQ4 148 aa4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 SLC25A46Q96AG3 418 aa4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 CREB3L1Q96BA8 519 aa4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 TCF7L1Q9HCS4 588 aa4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 MCTS1Q9ULC4 181 aaKnown RBP4.79□□□□□ -1.64
TOPBP1-201ENST00000260810 MBD3L4A6NDZ8 208 aaPredicted RBP4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 MBD3L3A6NE82 208 aaPredicted RBP4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 MBD3L5A6NJ08 208 aaPredicted RBP4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 OR6C65A6NJZ3 312 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 ANXA2P2A6NMY6 339 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 TSPAN4O14817 238 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 RHBDL1O75783 438 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 ANXA2P07355 339 aaKnown RBP4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 ACSM4P0C7M7 580 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 FAHP16930 419 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 GDNFP39905 211 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 FOLR3P41439 243 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 SLC25A1P53007 311 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 AP2S1P53680 142 aaPredicted RBP4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 EMP2P54851 167 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 TRAM2Q15035 370 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 RGS21Q2M5E4 152 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 ABCA11PQ4W5N1 156 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 DPPA2Q7Z7J5 298 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 LINC00346Q8IVM7 164 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 SLC35F2Q8IXU6 374 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 LSM14AQ8ND56 463 aaKnown RBP4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 ZNF540Q8NDQ6 660 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 MBD3L2Q8NHZ7 208 aaPredicted RBP4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 C4orf45Q96LM5 186 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 COQ7Q99807 217 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 OR5V1Q9UGF6 321 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 COA3Q9Y2R0 106 aaPredicted RBP4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 MED31Q9Y3C7 131 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 A0A1B0GVI7 797 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 SHISA9B4DS77 424 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 H3BML4 177 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 PMS2P2O95744 297 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 IFNA1P01562 189 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 SFTPBP07988 381 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 SAGP10523 405 aaPredicted RBP4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 LIPCP11150 499 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 MECP2P51608 486 aaKnown RBP4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 GABARAPL2P60520 117 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 CDC20Q12834 499 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 ULK3Q6PHR2 472 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 CADM3Q8N126 398 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 NRGNQ92686 78 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 FER1L6-AS2Q96M78 137 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 PAQR5Q9NXK6 330 aaPredicted RBP4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 C14orf166Q9Y224 244 aaKnown RBP4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 V9GYS6 101 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 hCG_1809904A0A1W2PP81 198 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 A0A1W2PPE2 198 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 A0A1W2PR64 198 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 A0A1W2PRV1 198 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 OR6C76A6NM76 312 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 LHBP01229 141 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 P04436 131 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 CDH11P55287 796 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 SCN1BQ07699 218 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 LY6DQ14210 128 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 OXA1LQ15070 435 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 SNAPC1Q16533 368 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 LY6G6FQ5SQ64 297 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 LIPNQ5VXI9 398 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 ARHGAP11AQ6P4F7 1023 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 DCDC5Q6ZRR9 648 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 RADILQ96JH8 1075 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 CHST6Q9GZX3 395 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 EMC7Q9NPA0 242 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 A6NLC8 198 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 SLC22A1O15245 554 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 S100A9P06702 114 aaKnown RBP4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 NAGAP17050 411 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 MPV17P39210 176 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 DAP3P51398 398 aaKnown RBP4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 GALK2Q01415 458 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 RBM39Q14498 530 aaKnown RBP4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 SPIN3Q5JUX0 258 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 LIPKQ5VXJ0 399 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 GLT8D1Q68CQ7 371 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 OR10K2Q6IF99 312 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 Q6ZNX1 250 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 YIPF5Q969M3 257 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 TMEM230Q96A57 120 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 CMBLQ96DG6 245 aa4.78□□□□□ -1.64
TOPBP1-201ENST00000260810 OR14A2Q96R54 314 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms