RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 TPT1P13693 172 aaKnown RBP6.9□□□□□ -1.31
GPNMB-201ENST00000258733 ADRA2CP18825 462 aa6.9□□□□□ -1.31
GPNMB-201ENST00000258733 F2RP25116 425 aa6.9□□□□□ -1.31
GPNMB-201ENST00000258733 IL10RBQ08334 325 aa6.9□□□□□ -1.31
GPNMB-201ENST00000258733 CPTPQ5TA50 214 aa6.9□□□□□ -1.31
GPNMB-201ENST00000258733 SPATA31B1PQ5VZV4 182 aa6.9□□□□□ -1.31
GPNMB-201ENST00000258733 TEX43Q6ZNM6 134 aa6.9□□□□□ -1.31
GPNMB-201ENST00000258733 TPRG1Q6ZUI0 275 aa6.9□□□□□ -1.31
GPNMB-201ENST00000258733 RNF152Q8N8N0 203 aa6.9□□□□□ -1.31
GPNMB-201ENST00000258733 OR4K1Q8NGD4 311 aa6.9□□□□□ -1.31
GPNMB-201ENST00000258733 OR1B1Q8NGR6 318 aa6.9□□□□□ -1.31
GPNMB-201ENST00000258733 KCNG3Q8TAE7 436 aa6.9□□□□□ -1.31
GPNMB-201ENST00000258733 THEM6Q8WUY1 208 aa6.9□□□□□ -1.31
GPNMB-201ENST00000258733 SDSLQ96GA7 329 aa6.9□□□□□ -1.31
GPNMB-201ENST00000258733 DERL1Q9BUN8 251 aa6.9□□□□□ -1.31
GPNMB-201ENST00000258733 SLC39A8Q9C0K1 460 aa6.9□□□□□ -1.31
GPNMB-201ENST00000258733 POLR2J2Q9GZM3 115 aaKnown RBP6.9□□□□□ -1.31
GPNMB-201ENST00000258733 CNOT2Q9NZN8 540 aaKnown RBP6.9□□□□□ -1.31
GPNMB-201ENST00000258733 LSM2Q9Y333 95 aaKnown RBP6.9□□□□□ -1.31
GPNMB-201ENST00000258733 TRAV14DV4A0A0A6YYC5 116 aa6.89□□□□□ -1.31
GPNMB-201ENST00000258733 E9PQ18 207 aa6.89□□□□□ -1.31
GPNMB-201ENST00000258733 P2RY10O00398 339 aa6.89□□□□□ -1.31
GPNMB-201ENST00000258733 UPK3AO75631 287 aa6.89□□□□□ -1.31
GPNMB-201ENST00000258733 GNB3P16520 340 aa6.89□□□□□ -1.31
GPNMB-201ENST00000258733 AMTP48728 403 aa6.89□□□□□ -1.31
GPNMB-201ENST00000258733 DNASE1L1P49184 302 aa6.89□□□□□ -1.31
GPNMB-201ENST00000258733 ARL4DP49703 201 aa6.89□□□□□ -1.31
GPNMB-201ENST00000258733 ZNF83P51522 516 aa6.89□□□□□ -1.31
GPNMB-201ENST00000258733 PAX9P55771 341 aa6.89□□□□□ -1.31
GPNMB-201ENST00000258733 HIST1H3AP68431 136 aa6.89□□□□□ -1.31
GPNMB-201ENST00000258733 ARHGAP1Q07960 439 aa6.89□□□□□ -1.31
GPNMB-201ENST00000258733 MRPL23Q16540 153 aaKnown RBP6.89□□□□□ -1.31
GPNMB-201ENST00000258733 ZXDCQ2QGD7 858 aaPredicted RBP6.89□□□□□ -1.31
GPNMB-201ENST00000258733 PLAG1Q6DJT9 500 aa6.89□□□□□ -1.31
GPNMB-201ENST00000258733 SFRP4Q6FHJ7 346 aaPredicted RBP6.89□□□□□ -1.31
GPNMB-201ENST00000258733 TNFAIP8L2Q6P589 184 aaPredicted RBP6.89□□□□□ -1.31
GPNMB-201ENST00000258733 KLHDC8AQ8IYD2 350 aa6.89□□□□□ -1.31
GPNMB-201ENST00000258733 NEU4Q8WWR8 484 aaPredicted RBP6.89□□□□□ -1.31
GPNMB-201ENST00000258733 VAMP8Q9BV40 100 aa6.89□□□□□ -1.31
GPNMB-201ENST00000258733 LRIT1Q9P2V4 623 aa6.89□□□□□ -1.31
GPNMB-201ENST00000258733 FZD1Q9UP38 647 aa6.89□□□□□ -1.31
GPNMB-201ENST00000258733 HES2Q9Y543 173 aa6.89□□□□□ -1.31
GPNMB-201ENST00000258733 DOCK5Q9H7D0 1870 aa6.89□□□□□ -1.31
GPNMB-201ENST00000258733 TTC3P53804 2025 aa6.89□□□□□ -1.31
GPNMB-201ENST00000258733 ANTXRLA6NF34 631 aa6.89□□□□□ -1.31
GPNMB-201ENST00000258733 YDJCA8MPS7 323 aa6.89□□□□□ -1.31
GPNMB-201ENST00000258733 E7EQ34 232 aa6.89□□□□□ -1.31
GPNMB-201ENST00000258733 OPN1SWP03999 348 aa6.89□□□□□ -1.31
GPNMB-201ENST00000258733 JMJD7P0C870 316 aa6.89□□□□□ -1.31
GPNMB-201ENST00000258733 SOX18P35713 384 aa6.89□□□□□ -1.31
GPNMB-201ENST00000258733 HNRNPA3P51991 378 aaKnown RBP6.89□□□□□ -1.31
GPNMB-201ENST00000258733 DUSP2Q05923 314 aa6.89□□□□□ -1.31
GPNMB-201ENST00000258733 MLLT11Q13015 90 aaPredicted RBP6.89□□□□□ -1.31
GPNMB-201ENST00000258733 DHRS2Q13268 280 aa6.89□□□□□ -1.31
GPNMB-201ENST00000258733 UNQ6126/PRO20091Q6UXV3 157 aa6.89□□□□□ -1.31
GPNMB-201ENST00000258733 ZNF788Q6ZQV5 615 aa6.89□□□□□ -1.31
GPNMB-201ENST00000258733 C2CD4AQ8NCU7 369 aaPredicted RBP6.89□□□□□ -1.31
GPNMB-201ENST00000258733 ACVR1CQ8NER5 493 aa6.89□□□□□ -1.31
GPNMB-201ENST00000258733 MARCH1Q8TCQ1 289 aa6.89□□□□□ -1.31
GPNMB-201ENST00000258733 TMED6Q8WW62 240 aa6.89□□□□□ -1.31
GPNMB-201ENST00000258733 RGMAQ96B86 450 aa6.89□□□□□ -1.31
GPNMB-201ENST00000258733 GNRHR2Q96P88 292 aa6.89□□□□□ -1.31
GPNMB-201ENST00000258733 PSMG3Q9BT73 122 aaPredicted RBP6.89□□□□□ -1.31
GPNMB-201ENST00000258733 MRIQ9BWK5 157 aa6.89□□□□□ -1.31
GPNMB-201ENST00000258733 RSPO3Q9BXY4 272 aaPredicted RBP6.89□□□□□ -1.31
GPNMB-201ENST00000258733 HSPB8Q9UJY1 196 aa6.89□□□□□ -1.31
GPNMB-201ENST00000258733 NHSQ6T4R5 1651 aa6.89□□□□□ -1.31
GPNMB-201ENST00000258733 TICRRQ7Z2Z1 1910 aa6.89□□□□□ -1.31
GPNMB-201ENST00000258733 SLC38A8A6NNN8 435 aa6.88□□□□□ -1.31
GPNMB-201ENST00000258733 H7BYZ3 331 aa6.88□□□□□ -1.31
GPNMB-201ENST00000258733 TRUB2O95900 331 aaKnown RBP6.88□□□□□ -1.31
GPNMB-201ENST00000258733 ESR1P03372 595 aa6.88□□□□□ -1.31
GPNMB-201ENST00000258733 MAS1P04201 325 aa6.88□□□□□ -1.31
GPNMB-201ENST00000258733 OR4Q2P0C623 313 aa6.88□□□□□ -1.31
GPNMB-201ENST00000258733 CEBPBP17676 345 aa6.88□□□□□ -1.31
GPNMB-201ENST00000258733 HINT1P49773 126 aaPredicted RBP6.88□□□□□ -1.31
GPNMB-201ENST00000258733 DOK7Q18PE1 504 aa6.88□□□□□ -1.31
GPNMB-201ENST00000258733 C2orf68Q2NKX9 166 aa6.88□□□□□ -1.31
GPNMB-201ENST00000258733 Q6ZPB1 254 aaPredicted RBP6.88□□□□□ -1.31
GPNMB-201ENST00000258733 C15orf39Q6ZRI6 1047 aa6.88□□□□□ -1.31
GPNMB-201ENST00000258733 GTF2H5Q6ZYL4 71 aa6.88□□□□□ -1.31
GPNMB-201ENST00000258733 CMC1Q7Z7K0 106 aa6.88□□□□□ -1.31
GPNMB-201ENST00000258733 CFAP52Q8N1V2 620 aa6.88□□□□□ -1.31
GPNMB-201ENST00000258733 OR52B4Q8NGK2 314 aa6.88□□□□□ -1.31
GPNMB-201ENST00000258733 SH3RF2Q8TEC5 729 aa6.88□□□□□ -1.31
GPNMB-201ENST00000258733 BLNKQ8WV28 456 aa6.88□□□□□ -1.31
GPNMB-201ENST00000258733 DIO2Q92813 273 aa6.88□□□□□ -1.31
GPNMB-201ENST00000258733 RNF183Q96D59 192 aa6.88□□□□□ -1.31
GPNMB-201ENST00000258733 GPATCH2Q9NW75 528 aa6.88□□□□□ -1.31
GPNMB-201ENST00000258733 PLA2G3Q9NZ20 509 aa6.88□□□□□ -1.31
GPNMB-201ENST00000258733 HSF4Q9ULV5 492 aa6.88□□□□□ -1.31
GPNMB-201ENST00000258733 MRPS33Q9Y291 106 aaKnown RBP6.88□□□□□ -1.31
GPNMB-201ENST00000258733 AK6Q9Y3D8 172 aaKnown RBP6.88□□□□□ -1.31
GPNMB-201ENST00000258733 ETV7Q9Y603 341 aa6.88□□□□□ -1.31
GPNMB-201ENST00000258733 C9JVG2 144 aa6.88□□□□□ -1.31
GPNMB-201ENST00000258733 XKRYO14609 159 aa6.88□□□□□ -1.31
GPNMB-201ENST00000258733 SMIM17P0DL12 118 aa6.88□□□□□ -1.31
GPNMB-201ENST00000258733 FBLP22087 321 aaKnown RBP6.88□□□□□ -1.31
GPNMB-201ENST00000258733 CD1CP29017 333 aa6.88□□□□□ -1.31
GPNMB-201ENST00000258733 HSD52Q0P140 79 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms