RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 ZNF524Q96C55 264 aa4.22□□□□□ -1.73
USP44-201ENST00000258499 TAF9BQ9HBM6 251 aa4.22□□□□□ -1.73
USP44-201ENST00000258499 RASL12Q9NYN1 266 aa4.22□□□□□ -1.73
USP44-201ENST00000258499 COL4A3Q01955 1670 aa4.22□□□□□ -1.73
USP44-201ENST00000258499 BORCS7-ASMTA0A0B4J1R7 106 aa4.22□□□□□ -1.73
USP44-201ENST00000258499 IGKV1D-43A0A0B4J1Z2 117 aa4.22□□□□□ -1.73
USP44-201ENST00000258499 PRR19A6NJB7 356 aa4.22□□□□□ -1.73
USP44-201ENST00000258499 LMO7DNF2Z398 122 aa4.22□□□□□ -1.73
USP44-201ENST00000258499 RAB27BO00194 218 aa4.22□□□□□ -1.73
USP44-201ENST00000258499 HSPB6O14558 160 aa4.22□□□□□ -1.73
USP44-201ENST00000258499 TP53I11O14683 189 aa4.22□□□□□ -1.73
USP44-201ENST00000258499 XRCC2O43543 280 aa4.22□□□□□ -1.73
USP44-201ENST00000258499 WISP1O95388 367 aa4.22□□□□□ -1.73
USP44-201ENST00000258499 DIRAS3O95661 229 aa4.22□□□□□ -1.73
USP44-201ENST00000258499 CRHP06850 196 aa4.22□□□□□ -1.73
USP44-201ENST00000258499 GP1BAP07359 652 aa4.22□□□□□ -1.73
USP44-201ENST00000258499 NME1P15531 152 aaKnown RBP4.22□□□□□ -1.73
USP44-201ENST00000258499 APOBEC1P41238 236 aaKnown RBP4.22□□□□□ -1.73
USP44-201ENST00000258499 FASLGP48023 281 aa4.22□□□□□ -1.73
USP44-201ENST00000258499 RAB5BP61020 215 aa4.22□□□□□ -1.73
USP44-201ENST00000258499 RSPO4Q2I0M5 234 aaPredicted RBP4.22□□□□□ -1.73
USP44-201ENST00000258499 ZNF684Q5T5D7 378 aa4.22□□□□□ -1.73
USP44-201ENST00000258499 C9orf135Q5VTT2 229 aa4.22□□□□□ -1.73
USP44-201ENST00000258499 OVCH2Q7RTZ1 564 aa4.22□□□□□ -1.73
USP44-201ENST00000258499 LRRC75AQ8NAA5 344 aa4.22□□□□□ -1.73
USP44-201ENST00000258499 NUBPLQ8TB37 319 aa4.22□□□□□ -1.73
USP44-201ENST00000258499 C14orf79Q96F83 325 aa4.22□□□□□ -1.73
USP44-201ENST00000258499 CMSS1Q9BQ75 279 aaKnown RBP4.22□□□□□ -1.73
USP44-201ENST00000258499 ZNF2Q9BSG1 426 aaPredicted RBP4.22□□□□□ -1.73
USP44-201ENST00000258499 ULBP2Q9BZM5 246 aa4.22□□□□□ -1.73
USP44-201ENST00000258499 ADAM19Q9H013 955 aa4.22□□□□□ -1.73
USP44-201ENST00000258499 WDR13Q9H1Z4 485 aa4.22□□□□□ -1.73
USP44-201ENST00000258499 GPR173Q9NS66 373 aa4.22□□□□□ -1.73
USP44-201ENST00000258499 NXT1Q9UKK6 140 aaKnown RBP4.22□□□□□ -1.73
USP44-201ENST00000258499 TNFSF18Q9UNG2 199 aa4.22□□□□□ -1.73
USP44-201ENST00000258499 PIGLQ9Y2B2 252 aa4.22□□□□□ -1.73
USP44-201ENST00000258499 B3GALT5Q9Y2C3 310 aa4.22□□□□□ -1.73
USP44-201ENST00000258499 MRPS17Q9Y2R5 130 aaKnown RBP4.22□□□□□ -1.73
USP44-201ENST00000258499 ALPK3Q96L96 1907 aa4.22□□□□□ -1.73
USP44-201ENST00000258499 TRAV14DV4A0A0A6YYC5 116 aa4.22□□□□□ -1.73
USP44-201ENST00000258499 TMEM218A2RU14 115 aa4.22□□□□□ -1.73
USP44-201ENST00000258499 LILRA5A6NI73 299 aa4.22□□□□□ -1.73
USP44-201ENST00000258499 NME2P1O60361 137 aa4.22□□□□□ -1.73
USP44-201ENST00000258499 OR7C1O76099 320 aaPredicted RBP4.22□□□□□ -1.73
USP44-201ENST00000258499 NXPH3O95157 252 aa4.22□□□□□ -1.73
USP44-201ENST00000258499 DUS4LO95620 317 aaKnown RBP4.22□□□□□ -1.73
USP44-201ENST00000258499 BPNT1O95861 308 aa4.22□□□□□ -1.73
USP44-201ENST00000258499 HPP00738 406 aa4.22□□□□□ -1.73
USP44-201ENST00000258499 TTRP02766 147 aa4.22□□□□□ -1.73
USP44-201ENST00000258499 KLK3P07288 261 aaPredicted RBP4.22□□□□□ -1.73
USP44-201ENST00000258499 GUSBP08236 651 aa4.22□□□□□ -1.73
USP44-201ENST00000258499 FGF2P09038 288 aa4.22□□□□□ -1.73
USP44-201ENST00000258499 MPGP29372 298 aa4.22□□□□□ -1.73
USP44-201ENST00000258499 RGS19P49795 217 aa4.22□□□□□ -1.73
USP44-201ENST00000258499 ZNF84P51523 738 aa4.22□□□□□ -1.73
USP44-201ENST00000258499 TAS2R46P59540 309 aa4.22□□□□□ -1.73
USP44-201ENST00000258499 VAMP2P63027 116 aa4.22□□□□□ -1.73
USP44-201ENST00000258499 CLINT1Q14677 625 aa4.22□□□□□ -1.73
USP44-201ENST00000258499 PCK2Q16822 640 aa4.22□□□□□ -1.73
USP44-201ENST00000258499 MICBQ29980 383 aa4.22□□□□□ -1.73
USP44-201ENST00000258499 JMJD6Q6NYC1 403 aaPredicted RBP4.22□□□□□ -1.73
USP44-201ENST00000258499 C5orf46Q6UWT4 87 aa4.22□□□□□ -1.73
USP44-201ENST00000258499 TMPPEQ6ZT21 453 aa4.22□□□□□ -1.73
USP44-201ENST00000258499 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.22□□□□□ -1.73
USP44-201ENST00000258499 SLC25A42Q86VD7 318 aa4.22□□□□□ -1.73
USP44-201ENST00000258499 C20orf196Q8IYI0 205 aa4.22□□□□□ -1.73
USP44-201ENST00000258499 OR51F2Q8NH61 342 aa4.22□□□□□ -1.73
USP44-201ENST00000258499 BORCS8Q96FH0 119 aa4.22□□□□□ -1.73
USP44-201ENST00000258499 NPAS1Q99742 590 aa4.22□□□□□ -1.73
USP44-201ENST00000258499 SOX7Q9BT81 388 aa4.22□□□□□ -1.73
USP44-201ENST00000258499 SHARPINQ9H0F6 387 aa4.22□□□□□ -1.73
USP44-201ENST00000258499 LANCL2Q9NS86 450 aa4.22□□□□□ -1.73
USP44-201ENST00000258499 C19orf25Q9UFG5 118 aaPredicted RBP4.22□□□□□ -1.73
USP44-201ENST00000258499 SRPK3Q9UPE1 567 aa4.22□□□□□ -1.73
USP44-201ENST00000258499 NCOR1O75376 2440 aa4.21□□□□□ -1.73
USP44-201ENST00000258499 IGHV1OR21-1A0A087WYE8 117 aa4.21□□□□□ -1.73
USP44-201ENST00000258499 A8MXK9 166 aa4.21□□□□□ -1.73
USP44-201ENST00000258499 C1orf196B1AJZ1 125 aa4.21□□□□□ -1.73
USP44-201ENST00000258499 TXNL1O43396 289 aa4.21□□□□□ -1.73
USP44-201ENST00000258499 SSX5O60225 188 aa4.21□□□□□ -1.73
USP44-201ENST00000258499 RAD51DO75771 328 aa4.21□□□□□ -1.73
USP44-201ENST00000258499 DXOO77932 396 aaKnown RBP4.21□□□□□ -1.73
USP44-201ENST00000258499 IGHV3-9P01782 118 aa4.21□□□□□ -1.73
USP44-201ENST00000258499 DBHP09172 617 aa4.21□□□□□ -1.73
USP44-201ENST00000258499 NR2C1P13056 603 aa4.21□□□□□ -1.73
USP44-201ENST00000258499 HIST1H1DP16402 221 aaKnown RBP4.21□□□□□ -1.73
USP44-201ENST00000258499 CTRB1P17538 263 aa4.21□□□□□ -1.73
USP44-201ENST00000258499 CPT2P23786 658 aa4.21□□□□□ -1.73
USP44-201ENST00000258499 GNRHRP30968 328 aa4.21□□□□□ -1.73
USP44-201ENST00000258499 ASCL1P50553 236 aa4.21□□□□□ -1.73
USP44-201ENST00000258499 FLI1Q01543 452 aaPredicted RBP4.21□□□□□ -1.73
USP44-201ENST00000258499 MFAP5Q13361 173 aa4.21□□□□□ -1.73
USP44-201ENST00000258499 LY6G6FQ5SQ64 297 aa4.21□□□□□ -1.73
USP44-201ENST00000258499 RPL7L1Q6DKI1 246 aaKnown RBP4.21□□□□□ -1.73
USP44-201ENST00000258499 CTRB2Q6GPI1 263 aa4.21□□□□□ -1.73
USP44-201ENST00000258499 CLEC18BQ6UXF7 455 aa4.21□□□□□ -1.73
USP44-201ENST00000258499 Q6ZRG5 221 aa4.21□□□□□ -1.73
USP44-201ENST00000258499 P4HA3Q7Z4N8 544 aa4.21□□□□□ -1.73
USP44-201ENST00000258499 C6orf201Q7Z4U5 140 aa4.21□□□□□ -1.73
USP44-201ENST00000258499 CPEB2Q7Z5Q1 589 aaKnown RBP4.21□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms