RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 MRPS24Q96EL2 167 aaKnown RBP17.03■□□□□ 0.32
PTPRE-201ENST00000254667 NSG2Q9Y328 171 aa17.03■□□□□ 0.32
PTPRE-201ENST00000254667 GABRA4P48169 554 aa17.03■□□□□ 0.32
PTPRE-201ENST00000254667 MMP15P51511 669 aa17.03■□□□□ 0.32
PTPRE-201ENST00000254667 ARL16Q0P5N6 197 aa17.03■□□□□ 0.32
PTPRE-201ENST00000254667 TMPRSS7Q7RTY8 843 aa17.03■□□□□ 0.32
PTPRE-201ENST00000254667 OR2W3Q7Z3T1 314 aa17.03■□□□□ 0.32
PTPRE-201ENST00000254667 TMEM229BQ8NBD8 167 aa17.03■□□□□ 0.32
PTPRE-201ENST00000254667 CHST6Q9GZX3 395 aa17.03■□□□□ 0.32
PTPRE-201ENST00000254667 UCK1Q9HA47 277 aa17.03■□□□□ 0.32
PTPRE-201ENST00000254667 SHROOM3Q8TF72 1996 aa17.03■□□□□ 0.32
PTPRE-201ENST00000254667 OR4E1P0C645 316 aa17.03■□□□□ 0.32
PTPRE-201ENST00000254667 C9orf152Q5JTZ5 239 aa17.03■□□□□ 0.32
PTPRE-201ENST00000254667 MTCH2Q9Y6C9 303 aa17.03■□□□□ 0.32
PTPRE-201ENST00000254667 ZIC2O95409 532 aaPredicted RBP17.02■□□□□ 0.32
PTPRE-201ENST00000254667 SFT2D1Q8WV19 159 aa17.02■□□□□ 0.32
PTPRE-201ENST00000254667 H2AFB1P0C5Y9 115 aa17.02■□□□□ 0.32
PTPRE-201ENST00000254667 IL9P15248 144 aa17.02■□□□□ 0.32
PTPRE-201ENST00000254667 ACKR3P25106 362 aa17.02■□□□□ 0.32
PTPRE-201ENST00000254667 HABP2Q14520 560 aaPredicted RBP17.02■□□□□ 0.32
PTPRE-201ENST00000254667 GNG3P63215 75 aa17.02■□□□□ 0.32
PTPRE-201ENST00000254667 TRIP6Q15654 476 aaKnown RBP17.02■□□□□ 0.32
PTPRE-201ENST00000254667 KCNRGQ8N5I3 272 aa17.02■□□□□ 0.32
PTPRE-201ENST00000254667 DEFB124Q8NES8 71 aa17.02■□□□□ 0.32
PTPRE-201ENST00000254667 M1APQ8TC57 530 aa17.02■□□□□ 0.32
PTPRE-201ENST00000254667 RBPMSQ93062 196 aaKnown RBP17.02■□□□□ 0.32
PTPRE-201ENST00000254667 UQCC2Q9BRT2 126 aa17.02■□□□□ 0.32
PTPRE-201ENST00000254667 STRAPQ9Y3F4 350 aaKnown RBP17.02■□□□□ 0.32
PTPRE-201ENST00000254667 FAM122BQ7Z309 247 aa17.02■□□□□ 0.31
PTPRE-201ENST00000254667 ARRDC1Q8N5I2 433 aa17.02■□□□□ 0.31
PTPRE-201ENST00000254667 OR10P1Q8NGE3 313 aa17.02■□□□□ 0.31
PTPRE-201ENST00000254667 GNRHR2Q96P88 292 aa17.02■□□□□ 0.31
PTPRE-201ENST00000254667 GSX2Q9BZM3 304 aa17.02■□□□□ 0.31
PTPRE-201ENST00000254667 RAB27BO00194 218 aa17.01■□□□□ 0.31
PTPRE-201ENST00000254667 MT-ND4LP03901 98 aa17.01■□□□□ 0.31
PTPRE-201ENST00000254667 PCBP3P57721 371 aaKnown RBP17.01■□□□□ 0.31
PTPRE-201ENST00000254667 ERHP84090 104 aaKnown RBP17.01■□□□□ 0.31
PTPRE-201ENST00000254667 BTN1A1Q13410 526 aa17.01■□□□□ 0.31
PTPRE-201ENST00000254667 COMMD5Q9GZQ3 224 aa17.01■□□□□ 0.31
PTPRE-201ENST00000254667 LYG2Q86SG7 212 aa17.01■□□□□ 0.31
PTPRE-201ENST00000254667 GPR87Q9BY21 358 aa17.01■□□□□ 0.31
PTPRE-201ENST00000254667 EXOGQ9Y2C4 368 aaKnown RBP17.01■□□□□ 0.31
PTPRE-201ENST00000254667 KPTNQ9Y664 436 aa17.01■□□□□ 0.31
PTPRE-201ENST00000254667 A0A0B4J203 849 aa17.01■□□□□ 0.31
PTPRE-201ENST00000254667 FUT3P21217 361 aa17.01■□□□□ 0.31
PTPRE-201ENST00000254667 DTYMKP23919 212 aa17.01■□□□□ 0.31
PTPRE-201ENST00000254667 NPBWR1P48145 328 aa17.01■□□□□ 0.31
PTPRE-201ENST00000254667 TAS2R45P59539 299 aa17.01■□□□□ 0.31
PTPRE-201ENST00000254667 OR10K2Q6IF99 312 aa17.01■□□□□ 0.31
PTPRE-201ENST00000254667 PRSS42Q7Z5A4 293 aa17.01■□□□□ 0.31
PTPRE-201ENST00000254667 CDX2Q99626 313 aaPredicted RBP17.01■□□□□ 0.31
PTPRE-201ENST00000254667 CNTRLQ7Z7A1 2325 aa17.01■□□□□ 0.31
PTPRE-201ENST00000254667 MARF1Q9Y4F3 1742 aaKnown RBP17.01■□□□□ 0.31
PTPRE-201ENST00000254667 A0A0A6YYJ9 748 aa17.01■□□□□ 0.31
PTPRE-201ENST00000254667 CELA2BP08218 269 aaPredicted RBP17.01■□□□□ 0.31
PTPRE-201ENST00000254667 GALMQ96C23 342 aa17.01■□□□□ 0.31
PTPRE-201ENST00000254667 C2orf50Q96LR7 162 aa17.01■□□□□ 0.31
PTPRE-201ENST00000254667 SRRQ9GZT4 340 aa17.01■□□□□ 0.31
PTPRE-201ENST00000254667 AKIP1Q9NQ31 210 aa17.01■□□□□ 0.31
PTPRE-201ENST00000254667 C20orf141Q9NUB4 165 aa17.01■□□□□ 0.31
PTPRE-201ENST00000254667 FAM221AA4D161 298 aa17■□□□□ 0.31
PTPRE-201ENST00000254667 SHISA8B8ZZ34 492 aa17■□□□□ 0.31
PTPRE-201ENST00000254667 KIR2DL1P43626 348 aaPredicted RBP17■□□□□ 0.31
PTPRE-201ENST00000254667 GPNMBQ14956 572 aa17■□□□□ 0.31
PTPRE-201ENST00000254667 SSX2Q16385 188 aa17■□□□□ 0.31
PTPRE-201ENST00000254667 PWWP2BQ6NUJ5 590 aa17■□□□□ 0.31
PTPRE-201ENST00000254667 SLC38A6Q8IZM9 456 aa17■□□□□ 0.31
PTPRE-201ENST00000254667 QPCTLQ9NXS2 382 aa17■□□□□ 0.31
PTPRE-201ENST00000254667 A0A1W2PQD3 144 aa17■□□□□ 0.31
PTPRE-201ENST00000254667 HPP00738 406 aa17■□□□□ 0.31
PTPRE-201ENST00000254667 TGFBR1P36897 503 aa17■□□□□ 0.31
PTPRE-201ENST00000254667 SMRP1Q8NCR6 262 aa17■□□□□ 0.31
PTPRE-201ENST00000254667 PELI1Q96FA3 418 aa17■□□□□ 0.31
PTPRE-201ENST00000254667 SIRT3Q9NTG7 399 aaPredicted RBP17■□□□□ 0.31
PTPRE-201ENST00000254667 IGHV3-64DA0A0J9YX35 117 aa17■□□□□ 0.31
PTPRE-201ENST00000254667 OR5H14A6NHG9 310 aa17■□□□□ 0.31
PTPRE-201ENST00000254667 FZD5Q13467 585 aa17■□□□□ 0.31
PTPRE-201ENST00000254667 TRILQ7L0X0 811 aa17■□□□□ 0.31
PTPRE-201ENST00000254667 MARCH1Q8TCQ1 289 aa17■□□□□ 0.31
PTPRE-201ENST00000254667 RTN4IP1Q8WWV3 396 aaPredicted RBP17■□□□□ 0.31
PTPRE-201ENST00000254667 DERL3Q96Q80 235 aa17■□□□□ 0.31
PTPRE-201ENST00000254667 LHX9Q9NQ69 397 aa17■□□□□ 0.31
PTPRE-201ENST00000254667 PCOLCE2Q9UKZ9 415 aa17■□□□□ 0.31
PTPRE-201ENST00000254667 TRGV10A0A0A0MS01 117 aa17■□□□□ 0.31
PTPRE-201ENST00000254667 PLPP2O43688 288 aa17■□□□□ 0.31
PTPRE-201ENST00000254667 MBP02144 154 aa17■□□□□ 0.31
PTPRE-201ENST00000254667 SCAND1P57086 179 aa17■□□□□ 0.31
PTPRE-201ENST00000254667 SIGLEC14Q08ET2 396 aa17■□□□□ 0.31
PTPRE-201ENST00000254667 SLC25A35Q3KQZ1 300 aa17■□□□□ 0.31
PTPRE-201ENST00000254667 SPANXN5Q5MJ07 72 aa17■□□□□ 0.31
PTPRE-201ENST00000254667 THNSL2Q86YJ6 484 aa17■□□□□ 0.31
PTPRE-201ENST00000254667 TMEM30CPA0ZSE6 113 aa17■□□□□ 0.31
PTPRE-201ENST00000254667 ST8SIA5O15466 376 aa17■□□□□ 0.31
PTPRE-201ENST00000254667 EPPINO95925 133 aa17■□□□□ 0.31
PTPRE-201ENST00000254667 ELLP55199 621 aaPredicted RBP17■□□□□ 0.31
PTPRE-201ENST00000254667 MOB1BQ7L9L4 216 aa17■□□□□ 0.31
PTPRE-201ENST00000254667 OR5M9Q8NGP3 310 aa17■□□□□ 0.31
PTPRE-201ENST00000254667 DOK1Q99704 481 aa17■□□□□ 0.31
PTPRE-201ENST00000254667 RHNO1Q9BSD3 238 aa17■□□□□ 0.31
PTPRE-201ENST00000254667 PTDSS2Q9BVG9 487 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms