RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 PPP1R8Q12972 351 aaKnown RBP17.48■□□□□ 0.39
NEDD8-201ENST00000250495 MICAQ29983 383 aa17.48■□□□□ 0.39
NEDD8-201ENST00000250495 C11orf91Q3C1V1 193 aa17.48■□□□□ 0.39
NEDD8-201ENST00000250495 DNAL1Q4LDG9 190 aa17.48■□□□□ 0.39
NEDD8-201ENST00000250495 OR6K6Q8NGW6 343 aa17.48■□□□□ 0.39
NEDD8-201ENST00000250495 OR4Q3Q8NH05 313 aa17.48■□□□□ 0.39
NEDD8-201ENST00000250495 UTP4Q969X6 686 aaKnown RBP17.48■□□□□ 0.39
NEDD8-201ENST00000250495 SPSB4Q96A44 273 aa17.48■□□□□ 0.39
NEDD8-201ENST00000250495 FAM71F1Q96KD3 344 aaPredicted RBP17.48■□□□□ 0.39
NEDD8-201ENST00000250495 DGCR6LQ9BY27 220 aa17.48■□□□□ 0.39
NEDD8-201ENST00000250495 MUC13Q9H3R2 512 aa17.48■□□□□ 0.39
NEDD8-201ENST00000250495 TOR3AQ9H497 397 aa17.48■□□□□ 0.39
NEDD8-201ENST00000250495 REEP1Q9H902 201 aa17.48■□□□□ 0.39
NEDD8-201ENST00000250495 A0A1B0GUS0 222 aa17.47■□□□□ 0.39
NEDD8-201ENST00000250495 hCG_1807616A0A1W2PRN6 198 aa17.47■□□□□ 0.39
NEDD8-201ENST00000250495 GYG2O15488 501 aa17.47■□□□□ 0.39
NEDD8-201ENST00000250495 TBX1O43435 398 aa17.47■□□□□ 0.39
NEDD8-201ENST00000250495 LHBP01229 141 aa17.47■□□□□ 0.39
NEDD8-201ENST00000250495 APOC1P02654 83 aa17.47■□□□□ 0.39
NEDD8-201ENST00000250495 CRYBA1P05813 215 aa17.47■□□□□ 0.39
NEDD8-201ENST00000250495 ATP6V1B2P21281 511 aa17.47■□□□□ 0.39
NEDD8-201ENST00000250495 ANOS1P23352 680 aa17.47■□□□□ 0.39
NEDD8-201ENST00000250495 GRK5P34947 590 aa17.47■□□□□ 0.39
NEDD8-201ENST00000250495 SNCBQ16143 134 aa17.47■□□□□ 0.39
NEDD8-201ENST00000250495 OR2T5Q6IEZ7 315 aa17.47■□□□□ 0.39
NEDD8-201ENST00000250495 Q6YL49 198 aa17.47■□□□□ 0.39
NEDD8-201ENST00000250495 ZNF826PQ6ZT77 177 aa17.47■□□□□ 0.39
NEDD8-201ENST00000250495 GCSAMQ8N6F7 178 aa17.47■□□□□ 0.39
NEDD8-201ENST00000250495 OR2T29Q8NH02 315 aa17.47■□□□□ 0.39
NEDD8-201ENST00000250495 OR8S1Q8NH09 359 aa17.47■□□□□ 0.39
NEDD8-201ENST00000250495 SAMHD1Q9Y3Z3 626 aaKnown RBP17.47■□□□□ 0.39
NEDD8-201ENST00000250495 MMP24Q9Y5R2 645 aa17.47■□□□□ 0.39
NEDD8-201ENST00000250495 TCRBV5S2A0A599 114 aa17.46■□□□□ 0.39
NEDD8-201ENST00000250495 DHRS12A0PJE2 317 aa17.46■□□□□ 0.39
NEDD8-201ENST00000250495 RIIAD1A6NNX1 92 aa17.46■□□□□ 0.39
NEDD8-201ENST00000250495 B2RBV5 119 aa17.46■□□□□ 0.39
NEDD8-201ENST00000250495 ATP6V1G2O95670 118 aa17.46■□□□□ 0.39
NEDD8-201ENST00000250495 ECDO95905 644 aaPredicted RBP17.46■□□□□ 0.39
NEDD8-201ENST00000250495 GYPAP02724 150 aa17.46■□□□□ 0.39
NEDD8-201ENST00000250495 SFTPBP07988 381 aa17.46■□□□□ 0.39
NEDD8-201ENST00000250495 CLUP10909 449 aa17.46■□□□□ 0.39
NEDD8-201ENST00000250495 ZNF3P17036 446 aa17.46■□□□□ 0.39
NEDD8-201ENST00000250495 HSD11B1P28845 292 aa17.46■□□□□ 0.39
NEDD8-201ENST00000250495 EIF2B1Q14232 305 aaKnown RBP17.46■□□□□ 0.39
NEDD8-201ENST00000250495 TIGD6Q17RP2 521 aa17.46■□□□□ 0.39
NEDD8-201ENST00000250495 METTL11BQ5VVY1 283 aa17.46■□□□□ 0.39
NEDD8-201ENST00000250495 DHFR2Q86XF0 187 aa17.46■□□□□ 0.39
NEDD8-201ENST00000250495 TMEM86BQ8N661 226 aa17.46■□□□□ 0.39
NEDD8-201ENST00000250495 WDFY2Q96P53 400 aa17.46■□□□□ 0.39
NEDD8-201ENST00000250495 RNPEPL1Q9HAU8 725 aa17.46■□□□□ 0.39
NEDD8-201ENST00000250495 ARMC1Q9NVT9 282 aa17.46■□□□□ 0.39
NEDD8-201ENST00000250495 TAS2R1Q9NYW7 299 aa17.46■□□□□ 0.39
NEDD8-201ENST00000250495 KAAG1Q9UBP8 84 aa17.46■□□□□ 0.39
NEDD8-201ENST00000250495 U3KQV3 271 aa17.46■□□□□ 0.39
NEDD8-201ENST00000250495 CENPVL3A0A0U1RRI6 287 aa17.45■□□□□ 0.38
NEDD8-201ENST00000250495 FAM181BA6NEQ2 426 aa17.45■□□□□ 0.38
NEDD8-201ENST00000250495 GSC2O15499 205 aa17.45■□□□□ 0.38
NEDD8-201ENST00000250495 SOX14O95416 240 aa17.45■□□□□ 0.38
NEDD8-201ENST00000250495 ANXA2P07355 339 aaKnown RBP17.45■□□□□ 0.38
NEDD8-201ENST00000250495 MMP9P14780 707 aa17.45■□□□□ 0.38
NEDD8-201ENST00000250495 MDKP21741 143 aaPredicted RBP17.45■□□□□ 0.38
NEDD8-201ENST00000250495 OMGP23515 440 aa17.45■□□□□ 0.38
NEDD8-201ENST00000250495 CFL1P23528 166 aaKnown RBP17.45■□□□□ 0.38
NEDD8-201ENST00000250495 CX3CR1P49238 355 aa17.45■□□□□ 0.38
NEDD8-201ENST00000250495 FAM3AP98173 230 aa17.45■□□□□ 0.38
NEDD8-201ENST00000250495 TRIM25Q14258 630 aaKnown RBP17.45■□□□□ 0.38
NEDD8-201ENST00000250495 PDCD1Q15116 288 aa17.45■□□□□ 0.38
NEDD8-201ENST00000250495 FAM98BQ52LJ0 330 aaKnown RBP17.45■□□□□ 0.38
NEDD8-201ENST00000250495 TEX36Q5VZQ5 186 aa17.45■□□□□ 0.38
NEDD8-201ENST00000250495 LCN8Q6JVE9 175 aa17.45■□□□□ 0.38
NEDD8-201ENST00000250495 SLC16A9Q7RTY1 509 aa17.45■□□□□ 0.38
NEDD8-201ENST00000250495 FAM90A1Q86YD7 464 aa17.45■□□□□ 0.38
NEDD8-201ENST00000250495 OR52H1Q8NGJ2 320 aa17.45■□□□□ 0.38
NEDD8-201ENST00000250495 GATAD2BQ8WXI9 593 aa17.45■□□□□ 0.38
NEDD8-201ENST00000250495 TAF15Q92804 592 aaKnown RBP eCLIP17.45■□□□□ 0.38
NEDD8-201ENST00000250495 SGK3Q96BR1 496 aa17.45■□□□□ 0.38
NEDD8-201ENST00000250495 TBX15Q96SF7 602 aa17.45■□□□□ 0.38
NEDD8-201ENST00000250495 CADM1Q9BY67 442 aaKnown RBP17.45■□□□□ 0.38
NEDD8-201ENST00000250495 SMURF1Q9HCE7 757 aa17.45■□□□□ 0.38
NEDD8-201ENST00000250495 CMC2Q9NRP2 79 aa17.45■□□□□ 0.38
NEDD8-201ENST00000250495 GK3PQ14409 553 aa17.44■□□□□ 0.38
NEDD8-201ENST00000250495 LINC01590Q5TEZ4 76 aa17.44■□□□□ 0.38
NEDD8-201ENST00000250495 RUSC1-AS1Q66K80 236 aa17.44■□□□□ 0.38
NEDD8-201ENST00000250495 BTN2A1Q7KYR7 527 aa17.44■□□□□ 0.38
NEDD8-201ENST00000250495 RHOUQ7L0Q8 258 aa17.44■□□□□ 0.38
NEDD8-201ENST00000250495 SHFQ7M4L6 423 aa17.44■□□□□ 0.38
NEDD8-201ENST00000250495 DPY19L4Q7Z388 723 aa17.44■□□□□ 0.38
NEDD8-201ENST00000250495 REEP6Q96HR9 211 aa17.44■□□□□ 0.38
NEDD8-201ENST00000250495 INTS14Q96SY0 518 aa17.44■□□□□ 0.38
NEDD8-201ENST00000250495 BEX1Q9HBH7 125 aa17.44■□□□□ 0.38
NEDD8-201ENST00000250495 TNFRSF19Q9NS68 423 aa17.44■□□□□ 0.38
NEDD8-201ENST00000250495 POMT1Q9Y6A1 747 aa17.44■□□□□ 0.38
NEDD8-201ENST00000250495 DVL1O14640 695 aa17.43■□□□□ 0.38
NEDD8-201ENST00000250495 TIPRLO75663 272 aa17.43■□□□□ 0.38
NEDD8-201ENST00000250495 MUC1P15941 1255 aaPredicted RBP17.43■□□□□ 0.38
NEDD8-201ENST00000250495 NAA10P41227 235 aaPredicted RBP17.43■□□□□ 0.38
NEDD8-201ENST00000250495 ARF6P62330 175 aa17.43■□□□□ 0.38
NEDD8-201ENST00000250495 MICBQ29980 383 aa17.43■□□□□ 0.38
NEDD8-201ENST00000250495 FIP1L1Q6UN15 594 aaKnown RBP17.43■□□□□ 0.38
NEDD8-201ENST00000250495 TREML4Q6UXN2 200 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms