RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 SPICQ8N5J4 248 aa20.52■□□□□ 0.88
SDF2L1-201ENST00000248958 OR8B12Q8NGG6 310 aa20.52■□□□□ 0.88
SDF2L1-201ENST00000248958 OR11L1Q8NGX0 322 aa20.52■□□□□ 0.88
SDF2L1-201ENST00000248958 OR2T27Q8NH04 317 aa20.52■□□□□ 0.88
SDF2L1-201ENST00000248958 OR51F2Q8NH61 342 aa20.52■□□□□ 0.88
SDF2L1-201ENST00000248958 Q8TCH9 128 aa20.52■□□□□ 0.88
SDF2L1-201ENST00000248958 RDH12Q96NR8 316 aa20.52■□□□□ 0.88
SDF2L1-201ENST00000248958 SLC29A1Q99808 456 aa20.52■□□□□ 0.88
SDF2L1-201ENST00000248958 C14orf119Q9NWQ9 140 aa20.52■□□□□ 0.88
SDF2L1-201ENST00000248958 FAM206AQ9NX38 181 aa20.52■□□□□ 0.88
SDF2L1-201ENST00000248958 GMPPBQ9Y5P6 360 aa20.52■□□□□ 0.88
SDF2L1-201ENST00000248958 A0A0U1RQV5 110 aa20.51■□□□□ 0.87
SDF2L1-201ENST00000248958 FAM157AC9JC47 383 aa20.51■□□□□ 0.87
SDF2L1-201ENST00000248958 PSMD9O00233 223 aa20.51■□□□□ 0.87
SDF2L1-201ENST00000248958 MPZL2O60487 215 aa20.51■□□□□ 0.87
SDF2L1-201ENST00000248958 PTBP3O95758 552 aaKnown RBP20.51■□□□□ 0.87
SDF2L1-201ENST00000248958 MSMBP08118 114 aa20.51■□□□□ 0.87
SDF2L1-201ENST00000248958 HNF1AP20823 631 aa20.51■□□□□ 0.87
SDF2L1-201ENST00000248958 GSK3AP49840 483 aa20.51■□□□□ 0.87
SDF2L1-201ENST00000248958 OCLNQ16625 522 aa20.51■□□□□ 0.87
SDF2L1-201ENST00000248958 GLCCI1Q86VQ1 547 aa20.51■□□□□ 0.87
SDF2L1-201ENST00000248958 LRRC28Q86X40 367 aaPredicted RBP20.51■□□□□ 0.87
SDF2L1-201ENST00000248958 KLHL36Q8N4N3 616 aa20.51■□□□□ 0.87
SDF2L1-201ENST00000248958 ZNF420Q8TAQ5 688 aaPredicted RBP20.51■□□□□ 0.87
SDF2L1-201ENST00000248958 SHARPINQ9H0F6 387 aa20.51■□□□□ 0.87
SDF2L1-201ENST00000248958 MOB1AQ9H8S9 216 aa20.51■□□□□ 0.87
SDF2L1-201ENST00000248958 ABCB9Q9NP78 766 aa20.51■□□□□ 0.87
SDF2L1-201ENST00000248958 C8orf4Q9NR00 106 aa20.51■□□□□ 0.87
SDF2L1-201ENST00000248958 DCAF16Q9NXF7 216 aa20.51■□□□□ 0.87
SDF2L1-201ENST00000248958 ATP6V1B1P15313 513 aa20.5■□□□□ 0.87
SDF2L1-201ENST00000248958 CPT2P23786 658 aa20.5■□□□□ 0.87
SDF2L1-201ENST00000248958 MDH2P40926 338 aaKnown RBP20.5■□□□□ 0.87
SDF2L1-201ENST00000248958 OR8S1Q8NH09 359 aa20.5■□□□□ 0.87
SDF2L1-201ENST00000248958 MBOAT4Q96T53 435 aa20.5■□□□□ 0.87
SDF2L1-201ENST00000248958 BEX2Q9BXY8 128 aa20.5■□□□□ 0.87
SDF2L1-201ENST00000248958 FN3KRPQ9HA64 309 aa20.5■□□□□ 0.87
SDF2L1-201ENST00000248958 PCDHB10Q9UN67 800 aa20.5■□□□□ 0.87
SDF2L1-201ENST00000248958 ABCA2Q9BZC7 2435 aa20.49■□□□□ 0.87
SDF2L1-201ENST00000248958 PRR32B1ATL7 298 aa20.49■□□□□ 0.87
SDF2L1-201ENST00000248958 GNALP38405 381 aa20.49■□□□□ 0.87
SDF2L1-201ENST00000248958 TMEM186Q96B77 213 aa20.49■□□□□ 0.87
SDF2L1-201ENST00000248958 PBOV1Q9GZY1 135 aa20.49■□□□□ 0.87
SDF2L1-201ENST00000248958 NUFIP1Q9UHK0 495 aaKnown RBP20.49■□□□□ 0.87
SDF2L1-201ENST00000248958 MPC1Q9Y5U8 109 aa20.49■□□□□ 0.87
SDF2L1-201ENST00000248958 NAV3Q8IVL0 2385 aa20.48■□□□□ 0.87
SDF2L1-201ENST00000248958 TRAV20A0A0B4J274 112 aa20.48■□□□□ 0.87
SDF2L1-201ENST00000248958 LOC100130705A0A1B0GUX0 176 aa20.48■□□□□ 0.87
SDF2L1-201ENST00000248958 CYB5R3P00387 301 aaPredicted RBP20.48■□□□□ 0.87
SDF2L1-201ENST00000248958 KRT8P05787 483 aa20.48■□□□□ 0.87
SDF2L1-201ENST00000248958 MTNR1AP48039 350 aa20.48■□□□□ 0.87
SDF2L1-201ENST00000248958 RFLNBQ8N5W9 214 aa20.48■□□□□ 0.87
SDF2L1-201ENST00000248958 UBE2FQ969M7 185 aa20.48■□□□□ 0.87
SDF2L1-201ENST00000248958 APOL4Q9BPW4 351 aa20.48■□□□□ 0.87
SDF2L1-201ENST00000248958 TTTY10Q9BZA0 68 aa20.48■□□□□ 0.87
SDF2L1-201ENST00000248958 UBAP1Q9NZ09 502 aa20.48■□□□□ 0.87
SDF2L1-201ENST00000248958 R4GMQ9 66 aa20.48■□□□□ 0.87
SDF2L1-201ENST00000248958 PPIAL4EA0A075B759 164 aa20.47■□□□□ 0.87
SDF2L1-201ENST00000248958 ANXA2P2A6NMY6 339 aa20.47■□□□□ 0.87
SDF2L1-201ENST00000248958 PPIAL4DF5H284 164 aa20.47■□□□□ 0.87
SDF2L1-201ENST00000248958 LOC110117498-PIK3R3F6TDL0 507 aa20.47■□□□□ 0.87
SDF2L1-201ENST00000248958 SLC16A6O15403 523 aa20.47■□□□□ 0.87
SDF2L1-201ENST00000248958 ENTPD6O75354 484 aa20.47■□□□□ 0.87
SDF2L1-201ENST00000248958 SULT1C4O75897 302 aa20.47■□□□□ 0.87
SDF2L1-201ENST00000248958 PPIAL4FP0DN26 164 aa20.47■□□□□ 0.87
SDF2L1-201ENST00000248958 PMELP40967 661 aa20.47■□□□□ 0.87
SDF2L1-201ENST00000248958 MAP2K3P46734 347 aa20.47■□□□□ 0.87
SDF2L1-201ENST00000248958 IL5RAQ01344 420 aa20.47■□□□□ 0.87
SDF2L1-201ENST00000248958 ZMYND11Q15326 602 aa20.47■□□□□ 0.87
SDF2L1-201ENST00000248958 FAM120AOSQ5T036 256 aa20.47■□□□□ 0.87
SDF2L1-201ENST00000248958 PRAMEF6Q5VXH4 476 aa20.47■□□□□ 0.87
SDF2L1-201ENST00000248958 ZNF555Q8NEP9 628 aa20.47■□□□□ 0.87
SDF2L1-201ENST00000248958 OR10H4Q8NGA5 316 aa20.47■□□□□ 0.87
SDF2L1-201ENST00000248958 LYZL4Q96KX0 146 aa20.47■□□□□ 0.87
SDF2L1-201ENST00000248958 Q96MT0 163 aa20.47■□□□□ 0.87
SDF2L1-201ENST00000248958 PAPOLGQ9BWT3 736 aaKnown RBP20.47■□□□□ 0.87
SDF2L1-201ENST00000248958 PATZ1Q9HBE1 687 aaKnown RBP20.47■□□□□ 0.87
SDF2L1-201ENST00000248958 FAM118AQ9NWS6 357 aa20.47■□□□□ 0.87
SDF2L1-201ENST00000248958 SMPD3Q9NY59 655 aaPredicted RBP20.47■□□□□ 0.87
SDF2L1-201ENST00000248958 MRM2Q9UI43 246 aaKnown RBP20.47■□□□□ 0.87
SDF2L1-201ENST00000248958 PPIAL4AQ9Y536 164 aa20.47■□□□□ 0.87
SDF2L1-201ENST00000248958 PCDHGB1Q9Y5G3 927 aa20.47■□□□□ 0.87
SDF2L1-201ENST00000248958 SNX5Q9Y5X3 404 aa20.47■□□□□ 0.87
SDF2L1-201ENST00000248958 IGHV3-64DA0A0J9YX35 117 aa20.46■□□□□ 0.87
SDF2L1-201ENST00000248958 A0A1W2PQL4 384 aaPredicted RBP20.46■□□□□ 0.87
SDF2L1-201ENST00000248958 SRSF10O75494 262 aaKnown RBP20.46■□□□□ 0.87
SDF2L1-201ENST00000248958 CST4P01036 141 aa20.46■□□□□ 0.87
SDF2L1-201ENST00000248958 FAM157CP0CG43 387 aa20.46■□□□□ 0.87
SDF2L1-201ENST00000248958 ACTC1P68032 377 aa20.46■□□□□ 0.87
SDF2L1-201ENST00000248958 ACTA1P68133 377 aa20.46■□□□□ 0.87
SDF2L1-201ENST00000248958 CR1LQ2VPA4 569 aa20.46■□□□□ 0.87
SDF2L1-201ENST00000248958 KRT74Q7RTS7 529 aa20.46■□□□□ 0.87
SDF2L1-201ENST00000248958 PACRGLQ8N7B6 248 aa20.46■□□□□ 0.87
SDF2L1-201ENST00000248958 YIPF7Q8N8F6 280 aa20.46■□□□□ 0.87
SDF2L1-201ENST00000248958 TBX5Q99593 518 aa20.46■□□□□ 0.87
SDF2L1-201ENST00000248958 MICU1Q9BPX6 476 aa20.46■□□□□ 0.87
SDF2L1-201ENST00000248958 UFSP2Q9NUQ7 469 aa20.46■□□□□ 0.87
SDF2L1-201ENST00000248958 HIF1ANQ9NWT6 349 aa20.46■□□□□ 0.87
SDF2L1-201ENST00000248958 RNF7Q9UBF6 113 aa20.46■□□□□ 0.87
SDF2L1-201ENST00000248958 RHBDD3Q9Y3P4 386 aa20.46■□□□□ 0.87
SDF2L1-201ENST00000248958 METTL15A6NJ78 407 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms