RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 ETV3LQ6ZN32 361 aa12.55□□□□□ -0.4
TARDBP-201ENST00000240185 HSD17B13Q7Z5P4 300 aaPredicted RBP12.55□□□□□ -0.4
TARDBP-201ENST00000240185 C12orf49Q9H741 205 aa12.55□□□□□ -0.4
TARDBP-201ENST00000240185 PRDM7Q9NQW5 492 aa12.55□□□□□ -0.4
TARDBP-201ENST00000240185 HOXD9P28356 352 aaPredicted RBP12.55□□□□□ -0.4
TARDBP-201ENST00000240185 CDC34P49427 236 aaPredicted RBP12.55□□□□□ -0.4
TARDBP-201ENST00000240185 SLC37A1P57057 533 aa12.55□□□□□ -0.4
TARDBP-201ENST00000240185 RPS16P62249 146 aaKnown RBP12.55□□□□□ -0.4
TARDBP-201ENST00000240185 TIAL1Q01085 375 aaKnown RBP eCLIP12.55□□□□□ -0.42e-6■■□□□ 13.8
TARDBP-201ENST00000240185 TCTN3Q6NUS6 607 aa12.55□□□□□ -0.4
TARDBP-201ENST00000240185 FAHD1Q6P587 224 aa12.55□□□□□ -0.4
TARDBP-201ENST00000240185 TP53RKQ96S44 253 aa12.55□□□□□ -0.4
TARDBP-201ENST00000240185 KIAA1456Q9P272 454 aa12.55□□□□□ -0.4
TARDBP-201ENST00000240185 R4GMQ9 66 aa12.55□□□□□ -0.4
TARDBP-201ENST00000240185 ADAM11O75078 769 aa12.55□□□□□ -0.4
TARDBP-201ENST00000240185 ONECUT2O95948 504 aa12.55□□□□□ -0.4
TARDBP-201ENST00000240185 ERVS71-1P61550 626 aa12.55□□□□□ -0.4
TARDBP-201ENST00000240185 HLA-DRB3P79483 266 aa12.55□□□□□ -0.4
TARDBP-201ENST00000240185 ISOC2Q96AB3 205 aa12.55□□□□□ -0.4
TARDBP-201ENST00000240185 MMACHCQ9Y4U1 282 aa12.55□□□□□ -0.4
TARDBP-201ENST00000240185 DUXBA0A1W2PPF3 345 aa12.54□□□□□ -0.4
TARDBP-201ENST00000240185 HSPB2A8KAH6 182 aa12.54□□□□□ -0.4
TARDBP-201ENST00000240185 CRISP2P16562 243 aa12.54□□□□□ -0.4
TARDBP-201ENST00000240185 CD96P40200 585 aa12.54□□□□□ -0.4
TARDBP-201ENST00000240185 APOBEC1P41238 236 aaKnown RBP12.54□□□□□ -0.4
TARDBP-201ENST00000240185 HSPB2Q16082 182 aa12.54□□□□□ -0.4
TARDBP-201ENST00000240185 CLLU1OSQ5K130 101 aa12.54□□□□□ -0.4
TARDBP-201ENST00000240185 MANEAQ5SRI9 462 aa12.54□□□□□ -0.4
TARDBP-201ENST00000240185 TMEM207Q6UWW9 146 aa12.54□□□□□ -0.4
TARDBP-201ENST00000240185 DHRS13Q6UX07 377 aa12.54□□□□□ -0.4
TARDBP-201ENST00000240185 OR2T6Q8NHC8 308 aa12.54□□□□□ -0.4
TARDBP-201ENST00000240185 ACY3Q96HD9 319 aa12.54□□□□□ -0.4
TARDBP-201ENST00000240185 CACFD1Q9UGQ2 172 aa12.54□□□□□ -0.4
TARDBP-201ENST00000240185 MAP1LC3B2A6NCE7 125 aa12.54□□□□□ -0.4
TARDBP-201ENST00000240185 HELTA6NFD8 242 aa12.54□□□□□ -0.4
TARDBP-201ENST00000240185 OPN1MWP04001 364 aa12.54□□□□□ -0.4
TARDBP-201ENST00000240185 OPN1MW2P0DN77 364 aa12.54□□□□□ -0.4
TARDBP-201ENST00000240185 OPN1MW3P0DN78 364 aa12.54□□□□□ -0.4
TARDBP-201ENST00000240185 PRSS36Q5K4E3 855 aa12.54□□□□□ -0.4
TARDBP-201ENST00000240185 CBLN2Q8IUK8 224 aa12.54□□□□□ -0.4
TARDBP-201ENST00000240185 OR5A2Q8NGI9 324 aa12.54□□□□□ -0.4
TARDBP-201ENST00000240185 TAAR6Q96RI8 345 aa12.54□□□□□ -0.4
TARDBP-201ENST00000240185 MAP1LC3BQ9GZQ8 125 aa12.54□□□□□ -0.4
TARDBP-201ENST00000240185 P4HTMQ9NXG6 502 aa12.54□□□□□ -0.4
TARDBP-201ENST00000240185 ST3GAL6Q9Y274 331 aa12.54□□□□□ -0.4
TARDBP-201ENST00000240185 HMX2A2RU54 273 aa12.54□□□□□ -0.4
TARDBP-201ENST00000240185 SP6Q3SY56 376 aa12.54□□□□□ -0.4
TARDBP-201ENST00000240185 SMUG1Q53HV7 270 aa12.54□□□□□ -0.4
TARDBP-201ENST00000240185 NAT6Q93015 286 aa12.54□□□□□ -0.4
TARDBP-201ENST00000240185 PRRC2BQ5JSZ5 2229 aaKnown RBP12.54□□□□□ -0.4
TARDBP-201ENST00000240185 M0R2Z0 102 aa12.54□□□□□ -0.4
TARDBP-201ENST00000240185 TMEM127O75204 238 aa12.54□□□□□ -0.4
TARDBP-201ENST00000240185 TSPAN12O95859 305 aa12.54□□□□□ -0.4
TARDBP-201ENST00000240185 DCDP81605 110 aaKnown RBP12.54□□□□□ -0.4
TARDBP-201ENST00000240185 DPPA3Q6W0C5 159 aa12.54□□□□□ -0.4
TARDBP-201ENST00000240185 LILRA3Q8N6C8 439 aaPredicted RBP12.54□□□□□ -0.4
TARDBP-201ENST00000240185 C11orf40Q8WZ69 217 aa12.54□□□□□ -0.4
TARDBP-201ENST00000240185 NTNG2Q96CW9 530 aa12.54□□□□□ -0.4
TARDBP-201ENST00000240185 DUSP23Q9BVJ7 150 aa12.54□□□□□ -0.4
TARDBP-201ENST00000240185 SLC46A2Q9BY10 475 aa12.54□□□□□ -0.4
TARDBP-201ENST00000240185 UQCC1Q9NVA1 299 aa12.54□□□□□ -0.4
TARDBP-201ENST00000240185 MED19A0JLT2 244 aaPredicted RBP12.53□□□□□ -0.4
TARDBP-201ENST00000240185 LRRC3CA6NJW4 275 aa12.53□□□□□ -0.4
TARDBP-201ENST00000240185 SLCO2B1O94956 709 aa12.53□□□□□ -0.4
TARDBP-201ENST00000240185 WNT11O96014 354 aa12.53□□□□□ -0.4
TARDBP-201ENST00000240185 GNG4P50150 75 aa12.53□□□□□ -0.4
TARDBP-201ENST00000240185 LIM2P55344 173 aa12.53□□□□□ -0.4
TARDBP-201ENST00000240185 RBPJQ06330 500 aa12.53□□□□□ -0.4
TARDBP-201ENST00000240185 ZNF816Q0VGE8 651 aaPredicted RBP12.53□□□□□ -0.4
TARDBP-201ENST00000240185 AWAT1Q58HT5 328 aa12.53□□□□□ -0.4
TARDBP-201ENST00000240185 FFAR4Q5NUL3 377 aa12.53□□□□□ -0.4
TARDBP-201ENST00000240185 SNX22Q96L94 193 aa12.53□□□□□ -0.4
TARDBP-201ENST00000240185 PBOV1Q9GZY1 135 aa12.53□□□□□ -0.4
TARDBP-201ENST00000240185 TIMM10BQ9Y5J6 103 aa12.53□□□□□ -0.4
TARDBP-201ENST00000240185 ZNF98A6NK75 572 aa12.53□□□□□ -0.4
TARDBP-201ENST00000240185 WNT1P04628 370 aa12.53□□□□□ -0.4
TARDBP-201ENST00000240185 CD38P28907 300 aa12.53□□□□□ -0.4
TARDBP-201ENST00000240185 PKIAP61925 76 aa12.53□□□□□ -0.4
TARDBP-201ENST00000240185 RPL18Q07020 188 aaKnown RBP12.53□□□□□ -0.4
TARDBP-201ENST00000240185 HIST3H3Q16695 136 aa12.53□□□□□ -0.4
TARDBP-201ENST00000240185 TMEM251Q8N6I4 163 aa12.53□□□□□ -0.4
TARDBP-201ENST00000240185 EDAQ92838 391 aa12.53□□□□□ -0.4
TARDBP-201ENST00000240185 SEC11CQ9BY50 192 aa12.53□□□□□ -0.4
TARDBP-201ENST00000240185 SERPINE3A8MV23 424 aa12.53□□□□□ -0.4
TARDBP-201ENST00000240185 CAMPP49913 170 aa12.53□□□□□ -0.4
TARDBP-201ENST00000240185 LPAL2Q16609 132 aa12.53□□□□□ -0.4
TARDBP-201ENST00000240185 MUC20Q8N307 709 aaPredicted RBP12.53□□□□□ -0.4
TARDBP-201ENST00000240185 SLC26A10Q8NG04 563 aa12.53□□□□□ -0.4
TARDBP-201ENST00000240185 Q9N2K0 584 aa12.53□□□□□ -0.4
TARDBP-201ENST00000240185 FKBP11Q9NYL4 201 aa12.53□□□□□ -0.4
TARDBP-201ENST00000240185 CHD2O14647 1828 aaKnown RBP12.53□□□□□ -0.4
TARDBP-201ENST00000240185 PMS2P1A4D2B8 440 aa12.53□□□□□ -0.4
TARDBP-201ENST00000240185 FAM24AA6NFZ4 105 aa12.53□□□□□ -0.4
TARDBP-201ENST00000240185 ZNF253O75346 499 aa12.53□□□□□ -0.4
TARDBP-201ENST00000240185 PRDX4Q13162 271 aa12.53□□□□□ -0.4
TARDBP-201ENST00000240185 PNLIPRP3Q17RR3 467 aa12.53□□□□□ -0.4
TARDBP-201ENST00000240185 RPEL1Q2QD12 228 aa12.53□□□□□ -0.4
TARDBP-201ENST00000240185 MRPS24Q96EL2 167 aaKnown RBP12.53□□□□□ -0.4
TARDBP-201ENST00000240185 LSM2Q9Y333 95 aaKnown RBP12.53□□□□□ -0.4
TARDBP-201ENST00000240185 A6NDN8 102 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms